FFCP PHASE1:Mm9::chr12:75991077..75991098,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:75991077..75991098,-|id=chr12:75991077..75991098,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.84e-25!63;UBERON:0002021!6.18e-22!10;UBERON:0000411!6.18e-22!10;UBERON:0001950!6.18e-22!10;UBERON:0000955!2.33e-19!50;UBERON:0006238!2.33e-19!50;UBERON:0003056!3.39e-19!49;UBERON:0002616!4.93e-18!49;UBERON:0007811!1.49e-16!86;UBERON:0002346!1.49e-16!71;UBERON:0003075!1.49e-16!71;UBERON:0007284!1.49e-16!71;UBERON:0001049!2.93e-16!52;UBERON:0005068!2.93e-16!52;UBERON:0006241!2.93e-16!52;UBERON:0007135!2.93e-16!52;UBERON:0003080!4.21e-15!40;UBERON:0001017!5.71e-15!73;UBERON:0005743!5.71e-15!73;UBERON:0004121!5.91e-15!102;UBERON:0000924!5.91e-15!102;UBERON:0006601!5.91e-15!102;UBERON:0002020!1.18e-14!34;UBERON:0000153!1.75e-14!94;UBERON:0000073!2.19e-14!75;UBERON:0001016!2.19e-14!75;UBERON:0002791!5.88e-14!29;UBERON:0003528!5.88e-14!29;UBERON:0001893!5.88e-14!29;UBERON:0002780!7.15e-14!39;UBERON:0001890!7.15e-14!39;UBERON:0006240!7.15e-14!39;UBERON:0000956!3.17e-13!21;UBERON:0001869!3.17e-13!21;UBERON:0000203!3.17e-13!21;UBERON:0002619!6.73e-12!17;UBERON:0002298!2.32e-08!6;UBERON:0000020!4.37e-07!12;UBERON:0001032!4.37e-07!12;UBERON:0004456!4.37e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.19e-47,10;UBERON:0000411,1.19e-47,10;UBERON:0001950,1.19e-47,10;UBERON:0002619,4.50e-28,17;UBERON:0000956,9.92e-23,21;UBERON:0001869,9.92e-23,21;UBERON:0000203,9.92e-23,21;UBERON:0003528,1.90e-16,29;UBERON:0002791,1.90e-16,29;UBERON:0001893,1.90e-16,29;UBERON:0002020,5.15e-14,34;UBERON:0002780,3.36e-12,39;UBERON:0001890,3.36e-12,39;UBERON:0006240,3.36e-12,39;UBERON:0003080,6.83e-12,40;UBERON:0000073,2.38e-11,54;UBERON:0001851,5.74e-11,1;UBERON:0005889,5.74e-11,1;UBERON:0002616,2.56e-10,46;UBERON:0000955,4.29e-10,47;UBERON:0006238,4.29e-10,47;UBERON:0003056,1.13e-09,49;UBERON:0001049,4.21e-09,52;UBERON:0005068,4.21e-09,52;UBERON:0006241,4.21e-09,52;UBERON:0007135,4.21e-09,52;UBERON:0001017,2.57e-08,73;UBERON:0001016,4.38e-08,75;UBERON:0002346,2.39e-07,64;UBERON:0003075,2.39e-07,64;UBERON:0007284,2.39e-07,64|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0.893811366596314,1.0752457327937,0,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0.695297280769106,1.53429274398198,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.29158205375759,7.90524638780963,0.685082519770642,3.0215755895588,0.675022500231806,2.2516060161211,1.35942722695261,2.5888015587591,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr12:75991077..75991098,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:75991077..75991098,- | |||
|id=chr12:75991077..75991098,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.84e-25!63;UBERON:0002021!6.18e-22!10;UBERON:0000411!6.18e-22!10;UBERON:0001950!6.18e-22!10;UBERON:0000955!2.33e-19!50;UBERON:0006238!2.33e-19!50;UBERON:0003056!3.39e-19!49;UBERON:0002616!4.93e-18!49;UBERON:0007811!1.49e-16!86;UBERON:0002346!1.49e-16!71;UBERON:0003075!1.49e-16!71;UBERON:0007284!1.49e-16!71;UBERON:0001049!2.93e-16!52;UBERON:0005068!2.93e-16!52;UBERON:0006241!2.93e-16!52;UBERON:0007135!2.93e-16!52;UBERON:0003080!4.21e-15!40;UBERON:0001017!5.71e-15!73;UBERON:0005743!5.71e-15!73;UBERON:0004121!5.91e-15!102;UBERON:0000924!5.91e-15!102;UBERON:0006601!5.91e-15!102;UBERON:0002020!1.18e-14!34;UBERON:0000153!1.75e-14!94;UBERON:0000073!2.19e-14!75;UBERON:0001016!2.19e-14!75;UBERON:0002791!5.88e-14!29;UBERON:0003528!5.88e-14!29;UBERON:0001893!5.88e-14!29;UBERON:0002780!7.15e-14!39;UBERON:0001890!7.15e-14!39;UBERON:0006240!7.15e-14!39;UBERON:0000956!3.17e-13!21;UBERON:0001869!3.17e-13!21;UBERON:0000203!3.17e-13!21;UBERON:0002619!6.73e-12!17;UBERON:0002298!2.32e-08!6;UBERON:0000020!4.37e-07!12;UBERON:0001032!4.37e-07!12;UBERON:0004456!4.37e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.19e-47,10;UBERON:0000411,1.19e-47,10;UBERON:0001950,1.19e-47,10;UBERON:0002619,4.50e-28,17;UBERON:0000956,9.92e-23,21;UBERON:0001869,9.92e-23,21;UBERON:0000203,9.92e-23,21;UBERON:0003528,1.90e-16,29;UBERON:0002791,1.90e-16,29;UBERON:0001893,1.90e-16,29;UBERON:0002020,5.15e-14,34;UBERON:0002780,3.36e-12,39;UBERON:0001890,3.36e-12,39;UBERON:0006240,3.36e-12,39;UBERON:0003080,6.83e-12,40;UBERON:0000073,2.38e-11,54;UBERON:0001851,5.74e-11,1;UBERON:0005889,5.74e-11,1;UBERON:0002616,2.56e-10,46;UBERON:0000955,4.29e-10,47;UBERON:0006238,4.29e-10,47;UBERON:0003056,1.13e-09,49;UBERON:0001049,4.21e-09,52;UBERON:0005068,4.21e-09,52;UBERON:0006241,4.21e-09,52;UBERON:0007135,4.21e-09,52;UBERON:0001017,2.57e-08,73;UBERON:0001016,4.38e-08,75;UBERON:0002346,2.39e-07,64;UBERON:0003075,2.39e-07,64;UBERON:0007284,2.39e-07,64 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0.893811366596314,1.0752457327937,0,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0.695297280769106,1.53429274398198,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.29158205375759,7.90524638780963,0.685082519770642,3.0215755895588,0.675022500231806,2.2516060161211,1.35942722695261,2.5888015587591,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:75991077..75991098,- | |||
}} |
Revision as of 23:11, 12 September 2013
Short description: | p@chr12:75991077..75991098, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:75991077..75991098, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.19e-47 | 10 |
visual cortex | 1.19e-47 | 10 |
neocortex | 1.19e-47 | 10 |
regional part of cerebral cortex | 4.50e-28 | 17 |
cerebral cortex | 9.92e-23 | 21 |
cerebral hemisphere | 9.92e-23 | 21 |
pallium | 9.92e-23 | 21 |
brain grey matter | 1.90e-16 | 29 |
regional part of telencephalon | 1.90e-16 | 29 |
telencephalon | 1.90e-16 | 29 |
gray matter | 5.15e-14 | 34 |
regional part of forebrain | 3.36e-12 | 39 |
forebrain | 3.36e-12 | 39 |
future forebrain | 3.36e-12 | 39 |
anterior neural tube | 6.83e-12 | 40 |
regional part of nervous system | 2.38e-11 | 54 |
cortex | 5.74e-11 | 1 |
zygote cortex | 5.74e-11 | 1 |
regional part of brain | 2.56e-10 | 46 |
brain | 4.29e-10 | 47 |
future brain | 4.29e-10 | 47 |
pre-chordal neural plate | 1.13e-09 | 49 |
neural tube | 4.21e-09 | 52 |
neural rod | 4.21e-09 | 52 |
future spinal cord | 4.21e-09 | 52 |
neural keel | 4.21e-09 | 52 |
central nervous system | 2.57e-08 | 73 |
nervous system | 4.38e-08 | 75 |
neurectoderm | 2.39e-07 | 64 |
neural plate | 2.39e-07 | 64 |
presumptive neural plate | 2.39e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.