FFCP PHASE1:Mm9::chr12:74647370..74647398,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=238257|HGNC=|MCL_coexpression_id=297|UniProt=Q8BHG3,Q0VEI2|association_with_transcript=0bp_to_ENSMUST00000042975,NM_178715,uc007nwm.1_5end|description=CAGE_peak_1_at_Tmem30b_5end|id=chr12:74647370..74647398,-|ontology_enrichment_celltype=CL:0000066!5.84e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.83e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.15e-22!130;UBERON:0000925!3.15e-22!130;UBERON:0006595!3.15e-22!130;UBERON:0001007!9.33e-22!128;UBERON:0001555!9.33e-22!128;UBERON:0007026!9.33e-22!128;UBERON:0004921!1.53e-20!126;UBERON:0004185!1.53e-20!126;UBERON:0000160!3.27e-18!43;UBERON:0005409!1.24e-16!59;UBERON:0000344!8.07e-10!15;UBERON:0001242!1.12e-08!13;UBERON:0000060!1.12e-08!13;UBERON:0001262!1.12e-08!13;UBERON:0004786!1.12e-08!13;UBERON:0002365!9.16e-08!25;UBERON:0002330!9.16e-08!25;UBERON:0000077!1.38e-07!97;UBERON:0009854!2.98e-07!23;UBERON:0009856!2.98e-07!23;UBERON:0000485!7.35e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.77e-17,118;UBERON:0000925,1.77e-17,118;UBERON:0006595,1.77e-17,118;UBERON:0001007,4.85e-17,116;UBERON:0001555,4.85e-17,116;UBERON:0007026,4.85e-17,116;UBERON:0000160,9.99e-17,31;UBERON:0004921,6.52e-16,114;UBERON:0005409,1.26e-14,47;UBERON:0000344,1.93e-10,15;UBERON:0001242,3.25e-09,13;UBERON:0001262,3.25e-09,13;UBERON:0004786,3.25e-09,13;UBERON:0002365,4.47e-08,25;UBERON:0002330,4.47e-08,25;UBERON:0009854,1.59e-07,23;UBERON:0009856,1.59e-07,23;UBERON:0000485,2.92e-07,11;UBERON:0002107,7.02e-07,22;UBERON:0007499,7.02e-07,22;UBERON:0006925,7.02e-07,22;UBERON:0009497,7.02e-07,22;UBERON:0000015,7.02e-07,22;UBERON:0002423,7.02e-07,22;UBERON:0006235,7.02e-07,22;UBERON:0008835,7.02e-07,22;UBERON:0003894,7.02e-07,22;UBERON:0004161,7.02e-07,22;UBERON:0008836,7.02e-07,22|phase1_expression=16.8156289460034,44.3198767701989,63.2448942751455,54.7460222465362,76.6370466817911,37.6049569082633,40.6485994636215,0.516493293766305,0.281577444303333,0.234064526321993,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,6.37824676133023,0,0,45.5978404961209,55.9758645803895,58.5716603397321,56.8605834929979,37.9229369527165,110.783653543066,81.6577620422176,50.5545564294095,0,0,0,29.1740135948787,41.0599574035476,32.054588933192,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.659058548203415,0,0.839918529752175,0,0,0,0.336093799142464,0,0,0,0,0,0,2.37191172448392,2.66788438833342,0,0,0.7104801149461,2.99600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61119299110724,0,0,0,0.151452386666368,0,4.92769630792852,7.74381489283248,12.9194553404473,39.3983329895607,35.7377029596218,38.0822854032735,16.8533304158102,0,0,0,52.6754389964785,0,0,0,19.0512116089868,19.2553497761075,28.8148933658426,27.9750505311697,0.258937883647172,0.148442139064825,0.693941307064543,0.608930956624282,1.38369298353635,0.60289056221049,1.64624189989987,0.376999773989026,116.181634835156,0.289198713839823,0,1.94120219936891,0.883366073841574,2.42437626567611,121.154644791779,0.878342391034642,0.209446706813455,67.9515766854853,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0,1.2220723662038,6.96679035416521,49.0282151361329,51.5582546921861,0.390361328888111,0.459804208866946,1.26043490863744,1.65775299619287,0.816437989815934,0.640568601424249,0.937017245597288,7.76110112217047,9.48499168904506,3.02569728268511,4.75068035242662,5.91828477554452,6.67313398141435,5.2237824978325,5.35033554660653,0.796137067273973,0,0,0,0,0.234526059981096,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0,0,0,0,0.134206418760372,0.630869845692382,0,147.03635842779,69.5504990325121,0,0.464473343720877,15.0774929746849,27.0255922995279,35.8028650590241,47.3661809020272,71.6538882932213,57.4799351986798,40.9676390344439,43.1735544329297,44.8417400373976,69.2090944663751,69.8125901095262,83.8384760400886,1.32767530667157,1.5994791765362,0,3.25842124552503,3.10323979468201,5.61086559122549,13.2164362589698,18.0084380535115,13.6588893221996,13.6970851953199,40.3175572838523,0.166845105716094,1.37591296579242,1.79889689907883,6.28866376304359,12.0588579876208,21.6431974014207,24.1664755458681,35.5076146637328,35.6929837144506,20.1275489138296,32.3762624471598,44.6213872553822,34.6033062787543,28.524188749984,34.2534900167991,6.65111484599777,0.189491411770485,0.977789858652155,0.509235257325564,1.40814148973101,2.34508760418542,5.71304738126433,7.21994497073856,3.4679731703362,1.99318220683897,2.71073106717728,5.57135270033509,4.48980952851328,7.37710198765709,0,0,29.9976206541612,13.7968373152366,0,0,0,1.00988370881749,0,0,0.430846795465598,0,0,0,0,0,0,0,4.25820255624806,2.13678724400706,1.95464351224291,8.57844639457184,21.2392221343941,2.6705869977048,2.72091201268276,7.54420319023592,15.9463022155617,17.2163682848599,17.0562673491026,5.81653967164009,9.62542921638748,29.0753817300951,26.3546521437497,33.0033738394198,19.0646179222121,5.221771726908,11.7716402242307,14.7892554171799,14.5418991586664,14.0911365905636,11.1893334009442,14.3098526083862,5.63212099352905,7.41412248023371,21.6117830093863,14.1802177529673,5.00539722757307,6.75504759195346,9.19167048824151,11.9822856813895,62.9598607120478,0,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,115.515144779829,0.474503990371703,2.43983360552218,11.0165447638237,15.0543573130417,22.0546189383639,28.1866483944275,35.3756790504438,48.6866052090295,91.378556170714,45.3577698553456,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0,1.69265700297135,0.419437377702843,0.241584120826006,0.288030006257865,0.632022241256357,10.3389859797984,6.57350125854894,3.11809975146708,4.65469408735452,3.9736270956253,1.68273629327956,1.9199638532695,1.41353029927407,0.914481679859998,1.20991422164209,1.26695244961678,0.577271049841977,0.818138315270983,5.44152920676507,3.55177525398503,0.897138566094757,2.68615386182526,19.7053385912834,26.0878640877143,23.8097111547445,41.5874655413388,19.0597399533438,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0.51776031175182,0.62272408550506,1.59609949360412,1.36586884603307,6.56388136084394,1.46729213839588,2.38996560985018,5.778414922842,3.29656091582231,2.24643446714271,5.05394423527595,5.32306529769503,3.2066478035633,4.58843386602424,4.54578582074572,4.25022470271538,8.57328644309533,5.44656331940821,6.55891349576597,4.94503080963968,3.82717192349433,5.48590803816665,4.79184676630211,4.29185141905178,5.37781741539616,4.89368778159719,4.82303264982556,4.57319932181931,4.99832451731901,5.43216455383447,4.48913817326191,5.33857581558784,3.64466584789585,6.54769669071503,4.95797891795091,6.17301155139652,3.49734809113124,7.95367468714389,12.247650080753,5.35607329792761,3.97064554415128,1.15933917810211|short_description=p1@Tmem30b}} | ||
|EntrezGene=238257 | |||
|HGNC= | |||
|MCL_coexpression_id=297 | |||
|UniProt=Q8BHG3,Q0VEI2 | |||
|association_with_transcript=0bp_to_ENSMUST00000042975,NM_178715,uc007nwm.1_5end | |||
|description=CAGE_peak_1_at_Tmem30b_5end | |||
|id=chr12:74647370..74647398,- | |||
|ontology_enrichment_celltype=CL:0000066!5.84e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.83e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.15e-22!130;UBERON:0000925!3.15e-22!130;UBERON:0006595!3.15e-22!130;UBERON:0001007!9.33e-22!128;UBERON:0001555!9.33e-22!128;UBERON:0007026!9.33e-22!128;UBERON:0004921!1.53e-20!126;UBERON:0004185!1.53e-20!126;UBERON:0000160!3.27e-18!43;UBERON:0005409!1.24e-16!59;UBERON:0000344!8.07e-10!15;UBERON:0001242!1.12e-08!13;UBERON:0000060!1.12e-08!13;UBERON:0001262!1.12e-08!13;UBERON:0004786!1.12e-08!13;UBERON:0002365!9.16e-08!25;UBERON:0002330!9.16e-08!25;UBERON:0000077!1.38e-07!97;UBERON:0009854!2.98e-07!23;UBERON:0009856!2.98e-07!23;UBERON:0000485!7.35e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.77e-17,118;UBERON:0000925,1.77e-17,118;UBERON:0006595,1.77e-17,118;UBERON:0001007,4.85e-17,116;UBERON:0001555,4.85e-17,116;UBERON:0007026,4.85e-17,116;UBERON:0000160,9.99e-17,31;UBERON:0004921,6.52e-16,114;UBERON:0005409,1.26e-14,47;UBERON:0000344,1.93e-10,15;UBERON:0001242,3.25e-09,13;UBERON:0001262,3.25e-09,13;UBERON:0004786,3.25e-09,13;UBERON:0002365,4.47e-08,25;UBERON:0002330,4.47e-08,25;UBERON:0009854,1.59e-07,23;UBERON:0009856,1.59e-07,23;UBERON:0000485,2.92e-07,11;UBERON:0002107,7.02e-07,22;UBERON:0007499,7.02e-07,22;UBERON:0006925,7.02e-07,22;UBERON:0009497,7.02e-07,22;UBERON:0000015,7.02e-07,22;UBERON:0002423,7.02e-07,22;UBERON:0006235,7.02e-07,22;UBERON:0008835,7.02e-07,22;UBERON:0003894,7.02e-07,22;UBERON:0004161,7.02e-07,22;UBERON:0008836,7.02e-07,22 | |||
|phase1_expression=16.8156289460034,44.3198767701989,63.2448942751455,54.7460222465362,76.6370466817911,37.6049569082633,40.6485994636215,0.516493293766305,0.281577444303333,0.234064526321993,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,6.37824676133023,0,0,45.5978404961209,55.9758645803895,58.5716603397321,56.8605834929979,37.9229369527165,110.783653543066,81.6577620422176,50.5545564294095,0,0,0,29.1740135948787,41.0599574035476,32.054588933192,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.659058548203415,0,0.839918529752175,0,0,0,0.336093799142464,0,0,0,0,0,0,2.37191172448392,2.66788438833342,0,0,0.7104801149461,2.99600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61119299110724,0,0,0,0.151452386666368,0,4.92769630792852,7.74381489283248,12.9194553404473,39.3983329895607,35.7377029596218,38.0822854032735,16.8533304158102,0,0,0,52.6754389964785,0,0,0,19.0512116089868,19.2553497761075,28.8148933658426,27.9750505311697,0.258937883647172,0.148442139064825,0.693941307064543,0.608930956624282,1.38369298353635,0.60289056221049,1.64624189989987,0.376999773989026,116.181634835156,0.289198713839823,0,1.94120219936891,0.883366073841574,2.42437626567611,121.154644791779,0.878342391034642,0.209446706813455,67.9515766854853,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0,1.2220723662038,6.96679035416521,49.0282151361329,51.5582546921861,0.390361328888111,0.459804208866946,1.26043490863744,1.65775299619287,0.816437989815934,0.640568601424249,0.937017245597288,7.76110112217047,9.48499168904506,3.02569728268511,4.75068035242662,5.91828477554452,6.67313398141435,5.2237824978325,5.35033554660653,0.796137067273973,0,0,0,0,0.234526059981096,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0,0,0,0,0.134206418760372,0.630869845692382,0,147.03635842779,69.5504990325121,0,0.464473343720877,15.0774929746849,27.0255922995279,35.8028650590241,47.3661809020272,71.6538882932213,57.4799351986798,40.9676390344439,43.1735544329297,44.8417400373976,69.2090944663751,69.8125901095262,83.8384760400886,1.32767530667157,1.5994791765362,0,3.25842124552503,3.10323979468201,5.61086559122549,13.2164362589698,18.0084380535115,13.6588893221996,13.6970851953199,40.3175572838523,0.166845105716094,1.37591296579242,1.79889689907883,6.28866376304359,12.0588579876208,21.6431974014207,24.1664755458681,35.5076146637328,35.6929837144506,20.1275489138296,32.3762624471598,44.6213872553822,34.6033062787543,28.524188749984,34.2534900167991,6.65111484599777,0.189491411770485,0.977789858652155,0.509235257325564,1.40814148973101,2.34508760418542,5.71304738126433,7.21994497073856,3.4679731703362,1.99318220683897,2.71073106717728,5.57135270033509,4.48980952851328,7.37710198765709,0,0,29.9976206541612,13.7968373152366,0,0,0,1.00988370881749,0,0,0.430846795465598,0,0,0,0,0,0,0,4.25820255624806,2.13678724400706,1.95464351224291,8.57844639457184,21.2392221343941,2.6705869977048,2.72091201268276,7.54420319023592,15.9463022155617,17.2163682848599,17.0562673491026,5.81653967164009,9.62542921638748,29.0753817300951,26.3546521437497,33.0033738394198,19.0646179222121,5.221771726908,11.7716402242307,14.7892554171799,14.5418991586664,14.0911365905636,11.1893334009442,14.3098526083862,5.63212099352905,7.41412248023371,21.6117830093863,14.1802177529673,5.00539722757307,6.75504759195346,9.19167048824151,11.9822856813895,62.9598607120478,0,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,115.515144779829,0.474503990371703,2.43983360552218,11.0165447638237,15.0543573130417,22.0546189383639,28.1866483944275,35.3756790504438,48.6866052090295,91.378556170714,45.3577698553456,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0,1.69265700297135,0.419437377702843,0.241584120826006,0.288030006257865,0.632022241256357,10.3389859797984,6.57350125854894,3.11809975146708,4.65469408735452,3.9736270956253,1.68273629327956,1.9199638532695,1.41353029927407,0.914481679859998,1.20991422164209,1.26695244961678,0.577271049841977,0.818138315270983,5.44152920676507,3.55177525398503,0.897138566094757,2.68615386182526,19.7053385912834,26.0878640877143,23.8097111547445,41.5874655413388,19.0597399533438,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0.51776031175182,0.62272408550506,1.59609949360412,1.36586884603307,6.56388136084394,1.46729213839588,2.38996560985018,5.778414922842,3.29656091582231,2.24643446714271,5.05394423527595,5.32306529769503,3.2066478035633,4.58843386602424,4.54578582074572,4.25022470271538,8.57328644309533,5.44656331940821,6.55891349576597,4.94503080963968,3.82717192349433,5.48590803816665,4.79184676630211,4.29185141905178,5.37781741539616,4.89368778159719,4.82303264982556,4.57319932181931,4.99832451731901,5.43216455383447,4.48913817326191,5.33857581558784,3.64466584789585,6.54769669071503,4.95797891795091,6.17301155139652,3.49734809113124,7.95367468714389,12.247650080753,5.35607329792761,3.97064554415128,1.15933917810211 | |||
|short_description=p1@Tmem30b | |||
}} |
Revision as of 23:09, 12 September 2013
Short description: | p1@Tmem30b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem30b_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | 0bp_to_ENSMUST00000042975, NM_178715, uc007nwm.1_5end |
EntrezGene: | Tmem30b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.83e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.77e-17 | 118 |
endoderm | 1.77e-17 | 118 |
presumptive endoderm | 1.77e-17 | 118 |
digestive system | 4.85e-17 | 116 |
digestive tract | 4.85e-17 | 116 |
primitive gut | 4.85e-17 | 116 |
intestine | 9.99e-17 | 31 |
subdivision of digestive tract | 6.52e-16 | 114 |
gastrointestinal system | 1.26e-14 | 47 |
mucosa | 1.93e-10 | 15 |
intestinal mucosa | 3.25e-09 | 13 |
wall of intestine | 3.25e-09 | 13 |
gastrointestinal system mucosa | 3.25e-09 | 13 |
exocrine gland | 4.47e-08 | 25 |
exocrine system | 4.47e-08 | 25 |
digestive tract diverticulum | 1.59e-07 | 23 |
sac | 1.59e-07 | 23 |
simple columnar epithelium | 2.92e-07 | 11 |
liver | 7.02e-07 | 22 |
epithelial sac | 7.02e-07 | 22 |
digestive gland | 7.02e-07 | 22 |
epithelium of foregut-midgut junction | 7.02e-07 | 22 |
anatomical boundary | 7.02e-07 | 22 |
hepatobiliary system | 7.02e-07 | 22 |
foregut-midgut junction | 7.02e-07 | 22 |
hepatic diverticulum | 7.02e-07 | 22 |
liver primordium | 7.02e-07 | 22 |
septum transversum | 7.02e-07 | 22 |
liver bud | 7.02e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.