FFCP PHASE1:Hg19::chr3:182971603..182971614,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15684|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc003fll.2_5end|coexpression_cluster_id=C0|description=CAGE_peak_10_at_B3GNT5_5end|id=chr3:182971603..182971614,+|ontology_enrichment_celltype=CL:0000766!2.07e-24!76;CL:0002057!4.30e-24!42;CL:0000860!1.30e-22!45;CL:0000557!4.50e-22!71;CL:0000839!1.86e-20!70;CL:0002009!1.89e-20!65;CL:0002194!8.04e-20!63;CL:0000576!8.04e-20!63;CL:0000040!8.04e-20!63;CL:0000559!8.04e-20!63;CL:0000763!6.55e-14!112;CL:0000049!6.55e-14!112;CL:0000048!1.16e-07!430;CL:0000680!3.08e-07!57;CL:0000056!3.08e-07!57;CL:0000355!3.08e-07!57;CL:0000723!3.75e-07!436|ontology_enrichment_celltype_v019=CL:0000860;3.94e-44;33!CL:0002057;3.94e-44;33!CL:0000473;1.66e-29;39!CL:0000234;1.66e-29;39!CL:0000576;9.35e-28;48!CL:0000766;2.26e-17;69!CL:0000094;1.33e-09;8!CL:0000763;1.62e-08;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-48,42;CL:0002057,1.50e-48,42;CL:0000473,9.24e-41,48;CL:0000234,9.24e-41,48;CL:0000766,2.06e-37,72;CL:0002194,1.14e-31,59;CL:0000576,1.14e-31,59;CL:0000040,1.14e-31,59;CL:0000559,1.14e-31,59;CL:0002009,3.25e-30,61;CL:0000557,3.10e-29,67;CL:0000839,2.35e-28,66;CL:0000763,6.04e-21,108;CL:0000049,6.04e-21,108;CL:0000738,1.63e-14,136;CL:0000048,9.41e-14,427;CL:0000723,3.48e-13,433;CL:0000034,5.25e-13,441;CL:0002087,6.02e-12,115;CL:0002031,3.34e-10,120;CL:0002320,5.80e-10,361;CL:0000037,9.25e-10,168;CL:0000094,9.92e-10,8;CL:0002032,1.54e-09,161;CL:0000837,1.54e-09,161;CL:0000988,1.29e-08,177;CL:0000134,1.32e-08,354;CL:0000219,6.55e-07,386|ontology_enrichment_development_v019=CL:0002057;1.30e-35;42!CL:0000049;2.40e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!3.49e-21!167;UBERON:0002371!6.48e-19!80;UBERON:0002193!2.03e-17!112;UBERON:0001474!6.24e-17!86;UBERON:0002405!1.26e-15!115;UBERON:0004765!3.68e-15!101;UBERON:0001434!3.68e-15!101;UBERON:0002390!3.92e-15!102;UBERON:0003061!3.92e-15!102;UBERON:0002050!1.34e-12!605;UBERON:0005423!1.34e-12!605;UBERON:0000467!2.13e-12!625;UBERON:0000923!2.77e-12!604;UBERON:0005291!2.77e-12!604;UBERON:0006598!2.77e-12!604;UBERON:0002532!2.77e-12!604;UBERON:0000480!3.41e-12!626;UBERON:0000468!6.45e-12!659;UBERON:0000926!7.66e-12!448;UBERON:0004120!7.66e-12!448;UBERON:0006603!7.66e-12!448;UBERON:0000922!7.97e-12!612;UBERON:0003081!2.81e-10!216;UBERON:0000914!5.67e-08!83;UBERON:0002329!5.67e-08!83;UBERON:0003077!5.67e-08!83;UBERON:0003059!5.67e-08!83;UBERON:0007282!5.67e-08!83;UBERON:0009618!5.67e-08!83;UBERON:0007285!5.67e-08!83;UBERON:0004290!6.35e-08!70;UBERON:0002385!2.36e-07!63;UBERON:0001015!2.36e-07!63;UBERON:0000383!2.36e-07!63;UBERON:0001009!2.96e-07!113;UBERON:0001134!3.49e-07!61;UBERON:0002036!3.49e-07!61;UBERON:0003082!3.49e-07!61;UBERON:0004535!3.60e-07!110|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.23e-24,76;UBERON:0001434,2.08e-23,100;UBERON:0004765,2.13e-23,90;UBERON:0002204,4.46e-23,167;UBERON:0001474,1.68e-21,82;UBERON:0002405,1.18e-20,93;UBERON:0002390,6.03e-19,98;UBERON:0003061,6.03e-19,98;UBERON:0002193,8.02e-19,108;UBERON:0000926,2.94e-14,315;UBERON:0004120,2.94e-14,315;UBERON:0006603,2.94e-14,315;UBERON:0003081,6.01e-11,203;UBERON:0002384,1.35e-09,371;UBERON:0002050,4.79e-08,564;UBERON:0000923,6.74e-08,560;UBERON:0010316,6.74e-08,560;UBERON:0005291,6.74e-08,560;UBERON:0006598,6.74e-08,560;UBERON:0010317,6.74e-08,560;UBERON:0002532,6.74e-08,560;UBERON:0005423,5.24e-07,581|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,3.15859936713415,0.261185628199839,0,0,0.218441372130172,0,4.20805600064159,0.994192127183747,2.01697543935533,1.20538905604795,0,0.975865597581014,0.246242116153576,0.612002073732759,0,0.85870796139317,0.684372125364421,0.753255837568817,0,0.0821005894499457,0,0,1.53531759238885,2.78669021968937,0,0,0,0,0,0,6.09394949385065,5.41470008169383,4.55722828503289,0.447830948479849,0.32389366601898,1.54545340580512,4.07115068582781,4.53451132426571,7.03493777444667,11.6214518452842,10.2791972005456,7.43295290148249,14.9600044007518,9.73410684810582,12.7700404139836,16.2030469946211,13.5551783552603,16.251178391321,11.1062980330137,9.00590295190891,10.562003768919,15.9163624032869,14.1208771913481,15.983428144976,9.89553900560148,12.3667467725412,9.80316926225197,19.1538097494865,8.5107783703671,14.9477339758938,13.8186765891209,15.1230046341858,12.5969529928968,9.08099253950053,11.4166067156145,14.8737322097216,0.211255286311942,1.70083439972035,1.04829322754188,1.46027220490444,1.80212271409808,0.16072558669708,0,0.59675003159727,0.547992461293902,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0.144846518960824,0,0,0.756278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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003fll.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_B3GNT5_5end | |||
|id=chr3:182971603..182971614,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.07e-24!76;CL:0002057!4.30e-24!42;CL:0000860!1.30e-22!45;CL:0000557!4.50e-22!71;CL:0000839!1.86e-20!70;CL:0002009!1.89e-20!65;CL:0002194!8.04e-20!63;CL:0000576!8.04e-20!63;CL:0000040!8.04e-20!63;CL:0000559!8.04e-20!63;CL:0000763!6.55e-14!112;CL:0000049!6.55e-14!112;CL:0000048!1.16e-07!430;CL:0000680!3.08e-07!57;CL:0000056!3.08e-07!57;CL:0000355!3.08e-07!57;CL:0000723!3.75e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.94e-44;33!CL:0002057;3.94e-44;33!CL:0000473;1.66e-29;39!CL:0000234;1.66e-29;39!CL:0000576;9.35e-28;48!CL:0000766;2.26e-17;69!CL:0000094;1.33e-09;8!CL:0000763;1.62e-08;100 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.30e-35;42!CL:0000049;2.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p10@B3GNT5 | |||
}} |
Revision as of 22:58, 12 September 2013
Short description: | p10@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_B3GNT5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_uc003fll.2_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-48 | 42 |
defensive cell | 9.24e-41 | 48 |
phagocyte | 9.24e-41 | 48 |
myeloid leukocyte | 2.06e-37 | 72 |
monopoietic cell | 1.14e-31 | 59 |
monocyte | 1.14e-31 | 59 |
monoblast | 1.14e-31 | 59 |
promonocyte | 1.14e-31 | 59 |
macrophage dendritic cell progenitor | 3.25e-30 | 61 |
granulocyte monocyte progenitor cell | 3.10e-29 | 67 |
myeloid lineage restricted progenitor cell | 2.35e-28 | 66 |
myeloid cell | 6.04e-21 | 108 |
common myeloid progenitor | 6.04e-21 | 108 |
leukocyte | 1.63e-14 | 136 |
multi fate stem cell | 9.41e-14 | 427 |
somatic stem cell | 3.48e-13 | 433 |
stem cell | 5.25e-13 | 441 |
nongranular leukocyte | 6.02e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 3.34e-10 | 120 |
connective tissue cell | 5.80e-10 | 361 |
hematopoietic stem cell | 9.25e-10 | 168 |
granulocyte | 9.92e-10 | 8 |
hematopoietic oligopotent progenitor cell | 1.54e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-09 | 161 |
hematopoietic cell | 1.29e-08 | 177 |
mesenchymal cell | 1.32e-08 | 354 |
motile cell | 6.55e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.23e-24 | 76 |
skeletal system | 2.08e-23 | 100 |
skeletal element | 2.13e-23 | 90 |
musculoskeletal system | 4.46e-23 | 167 |
bone element | 1.68e-21 | 82 |
immune system | 1.18e-20 | 93 |
hematopoietic system | 6.03e-19 | 98 |
blood island | 6.03e-19 | 98 |
hemolymphoid system | 8.02e-19 | 108 |
mesoderm | 2.94e-14 | 315 |
mesoderm-derived structure | 2.94e-14 | 315 |
presumptive mesoderm | 2.94e-14 | 315 |
lateral plate mesoderm | 6.01e-11 | 203 |
connective tissue | 1.35e-09 | 371 |
embryonic structure | 4.79e-08 | 564 |
germ layer | 6.74e-08 | 560 |
germ layer / neural crest | 6.74e-08 | 560 |
embryonic tissue | 6.74e-08 | 560 |
presumptive structure | 6.74e-08 | 560 |
germ layer / neural crest derived structure | 6.74e-08 | 560 |
epiblast (generic) | 6.74e-08 | 560 |
developing anatomical structure | 5.24e-07 | 581 |
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