FFCP PHASE1:Mm9::chr12:33455718..33455731,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=162|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:33455718..33455731,-|id=chr12:33455718..33455731,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,7.32e-13,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!5.97e-12!49;UBERON:0005173!5.97e-12!49;UBERON:0002417!5.97e-12!49;UBERON:0000916!5.97e-12!49;UBERON:0002107!8.70e-10!22;UBERON:0007499!8.70e-10!22;UBERON:0006925!8.70e-10!22;UBERON:0009497!8.70e-10!22;UBERON:0000015!8.70e-10!22;UBERON:0002423!8.70e-10!22;UBERON:0006235!8.70e-10!22;UBERON:0008835!8.70e-10!22;UBERON:0003894!8.70e-10!22;UBERON:0004161!8.70e-10!22;UBERON:0008836!8.70e-10!22;UBERON:0005256!2.15e-09!47;UBERON:0009854!2.74e-09!23;UBERON:0009856!2.74e-09!23;UBERON:0000014!5.98e-09!5;UBERON:0001003!5.98e-09!5;UBERON:0002097!5.98e-09!5;UBERON:0002199!5.98e-09!5;UBERON:0007029!5.98e-09!5;UBERON:0007376!5.98e-09!5;UBERON:0002416!5.98e-09!5;UBERON:0007383!5.98e-09!5;UBERON:0002365!2.06e-08!25;UBERON:0002330!2.06e-08!25;UBERON:0003914!5.50e-08!47;UBERON:0009569!5.52e-08!66;UBERON:0010147!8.07e-07!2;UBERON:0003937!8.07e-07!2;UBERON:0005399!8.07e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.92e-19,22;UBERON:0007499,3.92e-19,22;UBERON:0006925,3.92e-19,22;UBERON:0009497,3.92e-19,22;UBERON:0000015,3.92e-19,22;UBERON:0002423,3.92e-19,22;UBERON:0006235,3.92e-19,22;UBERON:0008835,3.92e-19,22;UBERON:0003894,3.92e-19,22;UBERON:0004161,3.92e-19,22;UBERON:0008836,3.92e-19,22;UBERON:0009854,2.82e-18,23;UBERON:0009856,2.82e-18,23;UBERON:0002365,9.16e-17,25;UBERON:0002330,9.16e-17,25;UBERON:0005256,2.12e-11,45;UBERON:0003914,6.29e-11,47;UBERON:0005172,2.14e-10,49;UBERON:0005173,2.14e-10,49;UBERON:0002417,2.14e-10,49;UBERON:0000916,2.14e-10,49;UBERON:0003104,3.59e-08,61;UBERON:0009142,3.59e-08,61;UBERON:0000998,5.62e-08,1;UBERON:0007194,5.62e-08,1;UBERON:0006868,5.62e-08,1;UBERON:0002530,1.31e-07,65;UBERON:0009569,1.76e-07,66;UBERON:0003929,3.12e-07,55|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,3.24888208723835,32.7059627581055,0,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,5.63937491987655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,5.6819301089348,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885660887877613,0.31399745568275,0.616985819609003,4.44678940630723,0,0,0,0,0,0,0.287696137450811,1.13494658742525,0,0,0,0,7.07220858251913,1.4351793081753,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0.661585194164886,2.14352128823924,0,0.0603129249281559,0.119372344003136,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr12:33455718..33455731,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=162 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:33455718..33455731,- | |||
|id=chr12:33455718..33455731,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.32e-13,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!5.97e-12!49;UBERON:0005173!5.97e-12!49;UBERON:0002417!5.97e-12!49;UBERON:0000916!5.97e-12!49;UBERON:0002107!8.70e-10!22;UBERON:0007499!8.70e-10!22;UBERON:0006925!8.70e-10!22;UBERON:0009497!8.70e-10!22;UBERON:0000015!8.70e-10!22;UBERON:0002423!8.70e-10!22;UBERON:0006235!8.70e-10!22;UBERON:0008835!8.70e-10!22;UBERON:0003894!8.70e-10!22;UBERON:0004161!8.70e-10!22;UBERON:0008836!8.70e-10!22;UBERON:0005256!2.15e-09!47;UBERON:0009854!2.74e-09!23;UBERON:0009856!2.74e-09!23;UBERON:0000014!5.98e-09!5;UBERON:0001003!5.98e-09!5;UBERON:0002097!5.98e-09!5;UBERON:0002199!5.98e-09!5;UBERON:0007029!5.98e-09!5;UBERON:0007376!5.98e-09!5;UBERON:0002416!5.98e-09!5;UBERON:0007383!5.98e-09!5;UBERON:0002365!2.06e-08!25;UBERON:0002330!2.06e-08!25;UBERON:0003914!5.50e-08!47;UBERON:0009569!5.52e-08!66;UBERON:0010147!8.07e-07!2;UBERON:0003937!8.07e-07!2;UBERON:0005399!8.07e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.92e-19,22;UBERON:0007499,3.92e-19,22;UBERON:0006925,3.92e-19,22;UBERON:0009497,3.92e-19,22;UBERON:0000015,3.92e-19,22;UBERON:0002423,3.92e-19,22;UBERON:0006235,3.92e-19,22;UBERON:0008835,3.92e-19,22;UBERON:0003894,3.92e-19,22;UBERON:0004161,3.92e-19,22;UBERON:0008836,3.92e-19,22;UBERON:0009854,2.82e-18,23;UBERON:0009856,2.82e-18,23;UBERON:0002365,9.16e-17,25;UBERON:0002330,9.16e-17,25;UBERON:0005256,2.12e-11,45;UBERON:0003914,6.29e-11,47;UBERON:0005172,2.14e-10,49;UBERON:0005173,2.14e-10,49;UBERON:0002417,2.14e-10,49;UBERON:0000916,2.14e-10,49;UBERON:0003104,3.59e-08,61;UBERON:0009142,3.59e-08,61;UBERON:0000998,5.62e-08,1;UBERON:0007194,5.62e-08,1;UBERON:0006868,5.62e-08,1;UBERON:0002530,1.31e-07,65;UBERON:0009569,1.76e-07,66;UBERON:0003929,3.12e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,3.24888208723835,32.7059627581055,0,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,5.63937491987655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,5.6819301089348,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885660887877613,0.31399745568275,0.616985819609003,4.44678940630723,0,0,0,0,0,0,0.287696137450811,1.13494658742525,0,0,0,0,7.07220858251913,1.4351793081753,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0.661585194164886,2.14352128823924,0,0.0603129249281559,0.119372344003136,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr12:33455718..33455731,- | |||
}} |
Revision as of 22:43, 12 September 2013
Short description: | p@chr12:33455718..33455731, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:33455718..33455731, - |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.32e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.92e-19 | 22 |
epithelial sac | 3.92e-19 | 22 |
digestive gland | 3.92e-19 | 22 |
epithelium of foregut-midgut junction | 3.92e-19 | 22 |
anatomical boundary | 3.92e-19 | 22 |
hepatobiliary system | 3.92e-19 | 22 |
foregut-midgut junction | 3.92e-19 | 22 |
hepatic diverticulum | 3.92e-19 | 22 |
liver primordium | 3.92e-19 | 22 |
septum transversum | 3.92e-19 | 22 |
liver bud | 3.92e-19 | 22 |
digestive tract diverticulum | 2.82e-18 | 23 |
sac | 2.82e-18 | 23 |
exocrine gland | 9.16e-17 | 25 |
exocrine system | 9.16e-17 | 25 |
trunk mesenchyme | 2.12e-11 | 45 |
epithelial tube | 6.29e-11 | 47 |
abdomen element | 2.14e-10 | 49 |
abdominal segment element | 2.14e-10 | 49 |
abdominal segment of trunk | 2.14e-10 | 49 |
abdomen | 2.14e-10 | 49 |
mesenchyme | 3.59e-08 | 61 |
entire embryonic mesenchyme | 3.59e-08 | 61 |
seminal vesicle | 5.62e-08 | 1 |
vesicular gland | 5.62e-08 | 1 |
seminal fluid secreting gland | 5.62e-08 | 1 |
gland | 1.31e-07 | 65 |
subdivision of trunk | 1.76e-07 | 66 |
gut epithelium | 3.12e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.