FFCP PHASE1:Hg19::chr3:170138971..170138982,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5010|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8514|TSSclassifier=S|UniProt=|association_with_transcript=-23bp_to_ENST00000489485_5end|coexpression_cluster_id=C2731|description=CAGE_peak_11_at_CLDN11_5end|id=chr3:170138971..170138982,+|ontology_enrichment_celltype=CL:0000222!1.27e-18!119;CL:0000115!6.49e-14!35;CL:0002139!1.72e-13!24;CL:0000213!1.25e-11!57;CL:0000215!1.25e-11!57;CL:0000183!1.64e-11!59;CL:0000055!4.67e-11!180;CL:0002078!5.03e-11!44;CL:0000071!5.79e-10!18;CL:0002546!5.79e-10!18;CL:0000680!1.84e-09!57;CL:0000056!1.84e-09!57;CL:0000355!1.84e-09!57;CL:0000057!2.21e-09!75;CL:0000187!3.95e-09!54;CL:0000393!3.14e-07!60;CL:0000211!3.14e-07!60;CL:0000220!6.27e-07!246|ontology_enrichment_celltype_v019=CL:0002139;3.62e-20;24!CL:0000115;1.54e-16;36!CL:0002078;1.50e-13;45!CL:0000213;1.07e-12;58!CL:0000215;1.07e-12;58!CL:0002138;3.69e-12;6!CL:0000071;3.61e-11;18!CL:0002144;1.23e-09;3!CL:0000708;2.10e-08;3!CL:1000413;1.21e-07;9!CL:0002494;3.16e-07;16!CL:0002575;5.71e-07;2|ontology_enrichment_celltype_v019_2=CL:0000115,1.40e-21,36;CL:0002139,2.34e-20,24;CL:0002078,2.71e-18,45;CL:0000213,3.58e-18,58;CL:0000215,3.58e-18,58;CL:0000222,1.09e-12,121;CL:0005020,3.20e-12,6;CL:0002138,3.20e-12,6;CL:0005022,3.20e-12,6;CL:0000071,2.72e-11,18;CL:0002546,2.72e-11,18;CL:0002144,7.93e-10,3;CL:0000708,3.44e-08,3;CL:0002321,6.26e-08,250;CL:1000413,1.24e-07,9;CL:0002494,3.55e-07,16;CL:0002575,7.67e-07,2|ontology_enrichment_development_v019=CL:0005022;3.69e-12;6!CL:0002546;3.61e-11;18|ontology_enrichment_disease=DOID:2394!3.68e-09!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!2.69e-20!79;UBERON:0007798!2.69e-20!79;UBERON:0000119!4.39e-20!312;UBERON:0000477!2.10e-19!286;UBERON:0000483!1.28e-18!309;UBERON:0004535!3.97e-17!110;UBERON:0001009!8.14e-17!113;UBERON:0004111!7.54e-16!241;UBERON:0000055!9.43e-14!69;UBERON:0004872!3.40e-13!84;UBERON:0000025!4.50e-13!194;UBERON:0003914!3.26e-11!118;UBERON:0000490!1.93e-10!138;UBERON:0000475!2.34e-10!365;UBERON:0001981!2.83e-10!60;UBERON:0007500!2.83e-10!60;UBERON:0004537!2.83e-10!60;UBERON:0006965!2.83e-10!60;UBERON:0001986!5.79e-10!18;UBERON:0004638!5.79e-10!18;UBERON:0004852!5.79e-10!18;UBERON:0000914!1.43e-09!83;UBERON:0002329!1.43e-09!83;UBERON:0003077!1.43e-09!83;UBERON:0003059!1.43e-09!83;UBERON:0007282!1.43e-09!83;UBERON:0009618!1.43e-09!83;UBERON:0007285!1.43e-09!83;UBERON:0004290!3.21e-09!70;UBERON:0006914!4.66e-09!25;UBERON:0000467!4.74e-09!625;UBERON:0000480!6.02e-09!626;UBERON:0005256!6.65e-09!143;UBERON:0001134!9.49e-09!61;UBERON:0002036!9.49e-09!61;UBERON:0003082!9.49e-09!61;UBERON:0002385!1.06e-08!63;UBERON:0001015!1.06e-08!63;UBERON:0000383!1.06e-08!63;UBERON:0002200!1.29e-08!11;UBERON:0006876!1.29e-08!11;UBERON:0000487!1.61e-08!22;UBERON:0000486!8.43e-08!82;UBERON:0000481!1.77e-07!347;UBERON:0001637!3.09e-07!42;UBERON:0003509!3.09e-07!42;UBERON:0004572!3.09e-07!42;UBERON:0000468!5.01e-07!659|ontology_enrichment_uberon_v019=UBERON:0006914;3.41e-11;25!UBERON:0004638;3.61e-11;18!UBERON:0001986;3.61e-11;18!UBERON:0004852;3.61e-11;18!UBERON:0000487;8.17e-11;22!UBERON:0010523;1.23e-09;3!UBERON:0001915;1.23e-09;3!UBERON:0001982;1.23e-09;3!UBERON:0001473;5.25e-09;8!UBERON:0004536;5.25e-09;8!UBERON:0006558;5.25e-09;8!UBERON:0003210;2.10e-08;3!UBERON:0000490;7.69e-08;33!UBERON:0003915;1.21e-07;9!UBERON:0004700;1.21e-07;9!UBERON:0001917;1.21e-07;9!UBERON:0002203;1.27e-07;6!UBERON:0001768;1.27e-07;6!UBERON:0002200;1.27e-07;6!UBERON:0002465;4.12e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.04e-16,109;UBERON:0002049,9.19e-16,78;UBERON:0007798,9.19e-16,78;UBERON:0001009,1.81e-15,112;UBERON:0006914,1.94e-11,25;UBERON:0004638,2.72e-11,18;UBERON:0001986,2.72e-11,18;UBERON:0004852,2.72e-11,18;UBERON:0000055,2.97e-11,68;UBERON:0000487,5.39e-11,22;UBERON:0004872,3.73e-10,83;UBERON:0010523,7.93e-10,3;UBERON:0001915,7.93e-10,3;UBERON:0001982,7.93e-10,3;UBERON:0000119,2.67e-09,309;UBERON:0004111,3.73e-09,240;UBERON:0001473,4.73e-09,8;UBERON:0004536,4.73e-09,8;UBERON:0006558,4.73e-09,8;UBERON:0003210,3.44e-08,3;UBERON:0003914,5.49e-08,117;UBERON:0000483,1.04e-07,306;UBERON:0002203,1.15e-07,6;UBERON:0001768,1.15e-07,6;UBERON:0002200,1.15e-07,6;UBERON:0003915,1.24e-07,9;UBERON:0004700,1.24e-07,9;UBERON:0001917,1.24e-07,9;UBERON:0002465,3.79e-07,10;UBERON:0007500,6.13e-07,59;UBERON:0001981,6.13e-07,59;UBERON:0004537,6.13e-07,59;UBERON:0006965,6.13e-07,59;UBERON:0001801,9.97e-07,14|phase1_expression=0.54503513781167,0,0,0,0,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.74259811776028,0,0,0,1.46062018077475,0,0.861847406537515,1.02000345622126,1.56727360739044,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8514 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENST00000489485_5end | |||
|coexpression_cluster_id=C2731 | |||
|description=CAGE_peak_11_at_CLDN11_5end | |||
|id=chr3:170138971..170138982,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.27e-18!119;CL:0000115!6.49e-14!35;CL:0002139!1.72e-13!24;CL:0000213!1.25e-11!57;CL:0000215!1.25e-11!57;CL:0000183!1.64e-11!59;CL:0000055!4.67e-11!180;CL:0002078!5.03e-11!44;CL:0000071!5.79e-10!18;CL:0002546!5.79e-10!18;CL:0000680!1.84e-09!57;CL:0000056!1.84e-09!57;CL:0000355!1.84e-09!57;CL:0000057!2.21e-09!75;CL:0000187!3.95e-09!54;CL:0000393!3.14e-07!60;CL:0000211!3.14e-07!60;CL:0000220!6.27e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.62e-20;24!CL:0000115;1.54e-16;36!CL:0002078;1.50e-13;45!CL:0000213;1.07e-12;58!CL:0000215;1.07e-12;58!CL:0002138;3.69e-12;6!CL:0000071;3.61e-11;18!CL:0002144;1.23e-09;3!CL:0000708;2.10e-08;3!CL:1000413;1.21e-07;9!CL:0002494;3.16e-07;16!CL:0002575;5.71e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.40e-21,36;CL:0002139,2.34e-20,24;CL:0002078,2.71e-18,45;CL:0000213,3.58e-18,58;CL:0000215,3.58e-18,58;CL:0000222,1.09e-12,121;CL:0005020,3.20e-12,6;CL:0002138,3.20e-12,6;CL:0005022,3.20e-12,6;CL:0000071,2.72e-11,18;CL:0002546,2.72e-11,18;CL:0002144,7.93e-10,3;CL:0000708,3.44e-08,3;CL:0002321,6.26e-08,250;CL:1000413,1.24e-07,9;CL:0002494,3.55e-07,16;CL:0002575,7.67e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;3.69e-12;6!CL:0002546;3.61e-11;18 | |||
|ontology_enrichment_disease=DOID:2394!3.68e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006914;3.41e-11;25!UBERON:0004638;3.61e-11;18!UBERON:0001986;3.61e-11;18!UBERON:0004852;3.61e-11;18!UBERON:0000487;8.17e-11;22!UBERON:0010523;1.23e-09;3!UBERON:0001915;1.23e-09;3!UBERON:0001982;1.23e-09;3!UBERON:0001473;5.25e-09;8!UBERON:0004536;5.25e-09;8!UBERON:0006558;5.25e-09;8!UBERON:0003210;2.10e-08;3!UBERON:0000490;7.69e-08;33!UBERON:0003915;1.21e-07;9!UBERON:0004700;1.21e-07;9!UBERON:0001917;1.21e-07;9!UBERON:0002203;1.27e-07;6!UBERON:0001768;1.27e-07;6!UBERON:0002200;1.27e-07;6!UBERON:0002465;4.12e-07;10 | |||
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| |||
|short_description=p11@CLDN11 | |||
}} |
Revision as of 22:40, 12 September 2013
Short description: | p11@CLDN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CLDN11_5end |
Coexpression cluster: | C2731_optic_Endothelial_small_corpus_Prostate_medulla_Pericytes |
Association with transcript: | -23bp_to_ENST00000489485_5end |
EntrezGene: | CLDN11 |
HGNC: | 8514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.40e-21 | 36 |
endothelial cell of vascular tree | 2.34e-20 | 24 |
meso-epithelial cell | 2.71e-18 | 45 |
lining cell | 3.58e-18 | 58 |
barrier cell | 3.58e-18 | 58 |
mesodermal cell | 1.09e-12 | 121 |
lymphangioblast | 3.20e-12 | 6 |
endothelial cell of lymphatic vessel | 3.20e-12 | 6 |
vascular lymphangioblast | 3.20e-12 | 6 |
blood vessel endothelial cell | 2.72e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.72e-11 | 18 |
capillary endothelial cell | 7.93e-10 | 3 |
leptomeningeal cell | 3.44e-08 | 3 |
embryonic cell | 6.26e-08 | 250 |
endothelial cell of artery | 1.24e-07 | 9 |
cardiocyte | 3.55e-07 | 16 |
central nervous system pericyte | 7.67e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.