FFCP PHASE1:Mm9::chr12:16760085..16760096,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:16760085..16760096,-|id=chr12:16760085..16760096,-|ontology_enrichment_celltype=CL:0002563!4.63e-08!9;CL:0002251!4.63e-08!9|ontology_enrichment_celltype_v019_2=CL:0002250,5.76e-17,3;CL:0002563,1.19e-09,9;CL:0002251,1.19e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.38e-14!43;UBERON:0000344!2.77e-12!15;UBERON:0001242!2.63e-10!13;UBERON:0000060!2.63e-10!13;UBERON:0001262!2.63e-10!13;UBERON:0004786!2.63e-10!13;UBERON:0005156!6.69e-10!26;UBERON:0000990!6.69e-10!26;UBERON:0005409!1.21e-09!59;UBERON:0003133!2.20e-09!24;UBERON:0003064!8.78e-09!14;UBERON:0003350!4.63e-08!9;UBERON:0004808!4.63e-08!9;UBERON:0001277!4.63e-08!9;UBERON:0004175!2.05e-07!9;UBERON:0004176!3.28e-07!17;UBERON:0009196!3.28e-07!17;UBERON:0009117!3.28e-07!17;UBERON:0003135!4.57e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.71e-10,13;UBERON:0001262,5.71e-10,13;UBERON:0004786,5.71e-10,13;UBERON:0000160,6.83e-10,31;UBERON:0003350,1.19e-09,9;UBERON:0004808,1.19e-09,9;UBERON:0001277,1.19e-09,9;UBERON:0000344,1.27e-08,15;UBERON:0001301,4.27e-08,3;UBERON:0006555,4.27e-08,3;UBERON:0005103,4.27e-08,3;UBERON:0000083,4.27e-08,3;UBERON:0009201,4.27e-08,3;UBERON:0004819,4.27e-08,3;UBERON:0006553,4.27e-08,3;UBERON:0003074,4.27e-08,3;UBERON:0003060,4.27e-08,3;UBERON:0000485,6.32e-08,11;UBERON:0005409,7.69e-08,47|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,0,0,0.760093677825496,1.00812051903972,0.221730510655305,0,0,0,2.59966457776147,1.32987716286794,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48442139064825,0.173485326766136,0,0,0.301445281105245,0.470354828542819,1.13099932196708,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,1.24406970610093,3.53811861807145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0,0.988193728344065,1.00534083520108,0.795825888164603,1.55971269695296,0.898819408654221,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,6.38730383437209,0.178065603667255,0,1.15479086080775,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03691978633434,0.621339313086926,0,0.149516546043979,0,0,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,1.64836461840539,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0.526139422875686,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr12:16760085..16760096,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:16760085..16760096,- | |||
|id=chr12:16760085..16760096,- | |||
|ontology_enrichment_celltype=CL:0002563!4.63e-08!9;CL:0002251!4.63e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,5.76e-17,3;CL:0002563,1.19e-09,9;CL:0002251,1.19e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.38e-14!43;UBERON:0000344!2.77e-12!15;UBERON:0001242!2.63e-10!13;UBERON:0000060!2.63e-10!13;UBERON:0001262!2.63e-10!13;UBERON:0004786!2.63e-10!13;UBERON:0005156!6.69e-10!26;UBERON:0000990!6.69e-10!26;UBERON:0005409!1.21e-09!59;UBERON:0003133!2.20e-09!24;UBERON:0003064!8.78e-09!14;UBERON:0003350!4.63e-08!9;UBERON:0004808!4.63e-08!9;UBERON:0001277!4.63e-08!9;UBERON:0004175!2.05e-07!9;UBERON:0004176!3.28e-07!17;UBERON:0009196!3.28e-07!17;UBERON:0009117!3.28e-07!17;UBERON:0003135!4.57e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.71e-10,13;UBERON:0001262,5.71e-10,13;UBERON:0004786,5.71e-10,13;UBERON:0000160,6.83e-10,31;UBERON:0003350,1.19e-09,9;UBERON:0004808,1.19e-09,9;UBERON:0001277,1.19e-09,9;UBERON:0000344,1.27e-08,15;UBERON:0001301,4.27e-08,3;UBERON:0006555,4.27e-08,3;UBERON:0005103,4.27e-08,3;UBERON:0000083,4.27e-08,3;UBERON:0009201,4.27e-08,3;UBERON:0004819,4.27e-08,3;UBERON:0006553,4.27e-08,3;UBERON:0003074,4.27e-08,3;UBERON:0003060,4.27e-08,3;UBERON:0000485,6.32e-08,11;UBERON:0005409,7.69e-08,47 | |||
|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,0,0,0.760093677825496,1.00812051903972,0.221730510655305,0,0,0,2.59966457776147,1.32987716286794,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48442139064825,0.173485326766136,0,0,0.301445281105245,0.470354828542819,1.13099932196708,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,1.24406970610093,3.53811861807145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0,0.988193728344065,1.00534083520108,0.795825888164603,1.55971269695296,0.898819408654221,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,6.38730383437209,0.178065603667255,0,1.15479086080775,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03691978633434,0.621339313086926,0,0.149516546043979,0,0,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,1.64836461840539,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0.526139422875686,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:16760085..16760096,- | |||
}} |
Revision as of 22:34, 12 September 2013
Short description: | p@chr12:16760085..16760096, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16760085..16760096, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 5.76e-17 | 3 |
intestinal epithelial cell | 1.19e-09 | 9 |
epithelial cell of alimentary canal | 1.19e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.71e-10 | 13 |
wall of intestine | 5.71e-10 | 13 |
gastrointestinal system mucosa | 5.71e-10 | 13 |
intestine | 6.83e-10 | 31 |
epithelium of mucosa | 1.19e-09 | 9 |
gastrointestinal system epithelium | 1.19e-09 | 9 |
intestinal epithelium | 1.19e-09 | 9 |
mucosa | 1.27e-08 | 15 |
epididymis | 4.27e-08 | 3 |
excretory tube | 4.27e-08 | 3 |
mesonephric epithelium | 4.27e-08 | 3 |
mesonephric tubule | 4.27e-08 | 3 |
nephric duct | 4.27e-08 | 3 |
kidney epithelium | 4.27e-08 | 3 |
renal duct | 4.27e-08 | 3 |
mesonephric duct | 4.27e-08 | 3 |
pronephric duct | 4.27e-08 | 3 |
simple columnar epithelium | 6.32e-08 | 11 |
gastrointestinal system | 7.69e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.