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FFCP PHASE1:Mm9::chr12:101437804..101437808,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12313|HGNC=|MCL_coexpression_id=0|UniProt=P62204|association_with_transcript=53bp_to_NM_009790,uc007osq.1_5end|description=CAGE_peak_5_at_Calm1_5end|id=chr12:101437804..101437808,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.50e-08!10;UBERON:0000411!7.50e-08!10;UBERON:0001950!7.50e-08!10;UBERON:0007023!8.39e-07!51;UBERON:0000073!8.63e-07!75;UBERON:0001016!8.63e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0001016,1.50e-09,75;UBERON:0000073,1.65e-09,54;UBERON:0001017,7.05e-09,73;UBERON:0002020,1.49e-08,34;UBERON:0001049,1.61e-08,52;UBERON:0005068,1.61e-08,52;UBERON:0006241,1.61e-08,52;UBERON:0007135,1.61e-08,52;UBERON:0007023,1.44e-07,51;UBERON:0000160,1.80e-07,31;UBERON:0004121,2.71e-07,95;UBERON:0000924,2.71e-07,95;UBERON:0006601,2.71e-07,95|phase1_expression=3.36312578920067,7.32848356042658,4.54999239389536,3.62957053568196,4.00716583957078,0.839396359559449,2.33612640595526,0.645616617207881,2.25261955442667,2.10658073689794,0,0.0797721589953364,1.54080656938085,0.262261207256992,0.999329285446988,0,0.699561878128147,0.630924330716475,1.91960207048034,1.69755860719212,22.5364718900335,0.695036658406197,0.261199789138935,3.19984845586813,5.50582274561208,5.7423196411502,3.4460959692726,3.01659725760245,11.7814520062952,6.5527833737582,6.20845429834853,0,0,0,1.44425809875637,0.831173226792462,1.02084678131185,2.09265815368454,1.5626706890476,1.0470474879476,0.588231488031014,0,1.45653105909346,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,1.17447824240415,2.17608642603403,0.672187598284928,2.31533492432352,4.01146815914259,2.57836046138721,0.809265843438391,0,1.26766280701236,0,0.889294796111139,0.899899717281399,1.97773272513395,0,1.19840044207362,0,0.207379224616955,0.675029691658453,0.210324961351382,7.42692559449889,7.95126747425809,0.122490799214954,0.0958454710182364,1.83843757322004,11.0115880999389,16.98241596533,18.5863905240055,0.527545150920775,0.731901148819277,0.52091337055676,18.4260779340911,3.37657566019008,10.0846843532695,4.71405736757868,8.25755748634797,2.05039390407831,2.04460721999597,4.53429360640713,0.579728977403356,0,0.679971333707751,0,0,0,4.21333260395256,0,1.55871602761721,1.7666978725517,3.52108549441701,0,0,0,5.19578498426914,3.54703811665138,5.05524445014783,3.76806803072898,1.03575153458869,0.742210695324124,0.346970653532272,0.913396434936424,0.461230994512117,0.60289056221049,0.705532242814229,0.125666591329675,1.48316980640624,0.433798070759735,0,0.323533699894818,0.220841518460394,0,3.72783522436244,9.07620470735796,7.54008144528438,4.85368404896324,0.11981512450592,0.599902730993408,0.127070227073065,21.2702707954848,20.1300265240196,1.63350657746724,22.5971616249959,23.0143911597297,17.8697718321222,13.1415423084884,0.509196819251581,0.497627882440372,0.505445516867349,0.631325567659422,0.390361328888111,0.689706313300419,0,0.452114453507145,0.476255494059295,0.640568601424249,0.655912071918102,3.3631438196072,0.646703978798527,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,1.39300866608867,1.4404749548556,0,1.40442637462647,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,15.1408762966172,1.74937841044784,5.28670052774077,7.1401652999157,0.426576501070468,0.464473343720877,1.03093969057675,1.4117846723634,1.33426826306922,3.23383564391351,5.69434873853414,3.29397909448022,0.251335208800269,1.1937388322469,1.16978452271472,2.69645822596266,2.80979464837102,2.78797782556114,0.948339504765408,0.456994050438915,0,0.814605311381257,0.581857461502877,0.701358198903186,0.442655759869801,0.442830443938806,0.31399745568275,0.123397163921801,0.296452627087149,0.83422552858047,0.786235980452812,0.449724224769707,0.202860121388503,0,0.763877555344259,0.287696137450811,0.486405680325106,1.09824565275233,0,0.744281895337007,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0.739012760666419,0,0.814824882210129,0.848725428875941,0.469380496577004,0.502518772325447,0,0.195133647857799,1.41871629695572,0.221464689648775,0.797273843287435,0.655453258862952,1.03610989119537,0.723245292907558,3.01582567878545,6.52686820582452,2.45882136509518,1.10374698521893,29.0596567877903,24.9660892441393,0.655739781506702,0.252470927204373,2.2085575359138,0.390438744296638,0.861693590931196,0.716906393857656,1.11399337041197,1.98153571552183,1.61924280669958,0.876767573733936,1.58115111178609,5.14114106274891,0.851640511249612,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.906970670894253,0.75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|EntrezGene=12313
|HGNC=
|MCL_coexpression_id=0
|UniProt=P62204
|association_with_transcript=53bp_to_NM_009790,uc007osq.1_5end
|description=CAGE_peak_5_at_Calm1_5end
|id=chr12:101437804..101437808,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!7.50e-08!10;UBERON:0000411!7.50e-08!10;UBERON:0001950!7.50e-08!10;UBERON:0007023!8.39e-07!51;UBERON:0000073!8.63e-07!75;UBERON:0001016!8.63e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0001016,1.50e-09,75;UBERON:0000073,1.65e-09,54;UBERON:0001017,7.05e-09,73;UBERON:0002020,1.49e-08,34;UBERON:0001049,1.61e-08,52;UBERON:0005068,1.61e-08,52;UBERON:0006241,1.61e-08,52;UBERON:0007135,1.61e-08,52;UBERON:0007023,1.44e-07,51;UBERON:0000160,1.80e-07,31;UBERON:0004121,2.71e-07,95;UBERON:0000924,2.71e-07,95;UBERON:0006601,2.71e-07,95
|phase1_expression=3.36312578920067,7.32848356042658,4.54999239389536,3.62957053568196,4.00716583957078,0.839396359559449,2.33612640595526,0.645616617207881,2.25261955442667,2.10658073689794,0,0.0797721589953364,1.54080656938085,0.262261207256992,0.999329285446988,0,0.699561878128147,0.630924330716475,1.91960207048034,1.69755860719212,22.5364718900335,0.695036658406197,0.261199789138935,3.19984845586813,5.50582274561208,5.7423196411502,3.4460959692726,3.01659725760245,11.7814520062952,6.5527833737582,6.20845429834853,0,0,0,1.44425809875637,0.831173226792462,1.02084678131185,2.09265815368454,1.5626706890476,1.0470474879476,0.588231488031014,0,1.45653105909346,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,1.17447824240415,2.17608642603403,0.672187598284928,2.31533492432352,4.01146815914259,2.57836046138721,0.809265843438391,0,1.26766280701236,0,0.889294796111139,0.899899717281399,1.97773272513395,0,1.19840044207362,0,0.207379224616955,0.675029691658453,0.210324961351382,7.42692559449889,7.95126747425809,0.122490799214954,0.0958454710182364,1.83843757322004,11.0115880999389,16.98241596533,18.5863905240055,0.527545150920775,0.731901148819277,0.52091337055676,18.4260779340911,3.37657566019008,10.0846843532695,4.71405736757868,8.25755748634797,2.05039390407831,2.04460721999597,4.53429360640713,0.579728977403356,0,0.679971333707751,0,0,0,4.21333260395256,0,1.55871602761721,1.7666978725517,3.52108549441701,0,0,0,5.19578498426914,3.54703811665138,5.05524445014783,3.76806803072898,1.03575153458869,0.742210695324124,0.346970653532272,0.913396434936424,0.461230994512117,0.60289056221049,0.705532242814229,0.125666591329675,1.48316980640624,0.433798070759735,0,0.323533699894818,0.220841518460394,0,3.72783522436244,9.07620470735796,7.54008144528438,4.85368404896324,0.11981512450592,0.599902730993408,0.127070227073065,21.2702707954848,20.1300265240196,1.63350657746724,22.5971616249959,23.0143911597297,17.8697718321222,13.1415423084884,0.509196819251581,0.497627882440372,0.505445516867349,0.631325567659422,0.390361328888111,0.689706313300419,0,0.452114453507145,0.476255494059295,0.640568601424249,0.655912071918102,3.3631438196072,0.646703978798527,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,1.39300866608867,1.4404749548556,0,1.40442637462647,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,15.1408762966172,1.74937841044784,5.28670052774077,7.1401652999157,0.426576501070468,0.464473343720877,1.03093969057675,1.4117846723634,1.33426826306922,3.23383564391351,5.69434873853414,3.29397909448022,0.251335208800269,1.1937388322469,1.16978452271472,2.69645822596266,2.80979464837102,2.78797782556114,0.948339504765408,0.456994050438915,0,0.814605311381257,0.581857461502877,0.701358198903186,0.442655759869801,0.442830443938806,0.31399745568275,0.123397163921801,0.296452627087149,0.83422552858047,0.786235980452812,0.449724224769707,0.202860121388503,0,0.763877555344259,0.287696137450811,0.486405680325106,1.09824565275233,0,0.744281895337007,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,0.739012760666419,0,0.814824882210129,0.848725428875941,0.469380496577004,0.502518772325447,0,0.195133647857799,1.41871629695572,0.221464689648775,0.797273843287435,0.655453258862952,1.03610989119537,0.723245292907558,3.01582567878545,6.52686820582452,2.45882136509518,1.10374698521893,29.0596567877903,24.9660892441393,0.655739781506702,0.252470927204373,2.2085575359138,0.390438744296638,0.861693590931196,0.716906393857656,1.11399337041197,1.98153571552183,1.61924280669958,0.876767573733936,1.58115111178609,5.14114106274891,0.851640511249612,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.906970670894253,0.754420319023592,2.06711325016541,0,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,0.493647061806363,0,4.22409074514679,8.26145076368899,1.7642271844397,0.65954501176592,0.807322133479528,0.663442174209714,0.954978752025092,1.31312719796049,4.95517422270746,29.6680483216815,0.683483523191411,0.206386867963223,1.11116716421827,0.376736914009382,0.956859594047176,0.457556346413045,0.169978429993855,1.11961161858926,0.552799895217695,1.90934123603023,0.316335993581135,0.609958401380546,0.648032044930808,0.627264888043406,1.31017538247707,1.61837215661785,1.07449492442937,1.30877970992015,2.07383957266869,1.24267862617385,160.08879458631,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.651021924219751,0.419437377702843,77.3069186643219,83.8167318210389,0.632022241256357,0.202725215290164,0.2054219143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|short_description=p5@Calm1
}}

Revision as of 21:57, 12 September 2013

Short description:p5@Calm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Calm1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 53bp_to_NM_009790, uc007osq.1_5end
EntrezGene:Calm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Calm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B911.78
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A421.27
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D522.60
cortex, neonate N30.CNhs11107.1392-42F223.01
diencephalon, adult.CNhs10482.20-12F217.87
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C229.06
medulla oblongata, neonate N30.CNhs11200.1396-42A324.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C929.67
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G5160.09
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H377.31
testis, neonate N30.CNhs11130.1391-42E283.82
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.96
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.47e-0910
visual cortex1.47e-0910
neocortex1.47e-0910
nervous system1.50e-0975
regional part of nervous system1.65e-0954
central nervous system7.05e-0973
gray matter1.49e-0834
neural tube1.61e-0852
neural rod1.61e-0852
future spinal cord1.61e-0852
neural keel1.61e-0852
adult organism1.44e-0751
intestine1.80e-0731
ectoderm-derived structure2.71e-0795
ectoderm2.71e-0795
presumptive ectoderm2.71e-0795







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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