FFCP PHASE1:Mm9::chr12:100881304..100881307,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:100881304..100881307,+|id=chr12:100881304..100881307,+|ontology_enrichment_celltype=CL:0000553!1.34e-07!6;CL:0000556!1.34e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.26e-18,6;CL:0000556,1.26e-18,6;CL:0002031,1.44e-12,25;CL:0000050,3.45e-12,9;CL:0002027,1.30e-09,3;CL:0002006,1.30e-09,3;CL:0002024,1.30e-09,3;CL:0000988,2.40e-09,32;CL:0002032,2.40e-09,32;CL:0000037,2.40e-09,32;CL:0000837,2.40e-09,32;CL:0000839,3.21e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.22e-09,3;DOID:4045,1.22e-09,3|ontology_enrichment_uberon=UBERON:0000926!3.06e-09!193;UBERON:0004120!3.06e-09!193;UBERON:0006603!3.06e-09!193;UBERON:0002390!4.16e-08!45;UBERON:0003061!4.16e-08!45;UBERON:0002193!4.35e-08!48;UBERON:0004177!5.56e-08!29;UBERON:0000077!6.18e-08!97;UBERON:0003081!8.13e-08!88;UBERON:0001041!8.41e-08!92;UBERON:0003104!1.90e-07!131;UBERON:0009142!1.90e-07!131;UBERON:0002405!3.38e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,8.09e-09,45;UBERON:0003061,8.09e-09,45;UBERON:0002106,2.51e-08,6;UBERON:0004457,2.51e-08,6;UBERON:0000042,2.51e-08,6;UBERON:0004854,2.51e-08,6;UBERON:0009034,2.51e-08,6;UBERON:0002095,2.51e-08,6;UBERON:0004782,2.51e-08,6;UBERON:0003281,2.51e-08,6;UBERON:0009664,2.51e-08,6;UBERON:0002296,2.51e-08,6;UBERON:0005602,2.51e-08,6;UBERON:0001179,2.51e-08,6;UBERON:0006293,2.51e-08,6;UBERON:0002204,9.32e-08,32;UBERON:0003887,3.47e-07,10|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,2.53419699873,0,1.88339765048055,0.0797721589953364,6.84802919724823,0,5.66286595086627,11.5410902412201,2.79824751251259,41.7987369099665,39.7631857456642,38.1950686618227,0,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,6.27797446105362,7.0320181007142,3.14114246384279,1.76469446409304,4.78131839470912,1.94204141212461,0,0,0,0,0,0,0,0,0,17.7849562421201,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6174961980173,0.29688427812965,0,0,0,0,0.117588707135705,0,6.92145909656247,0.722996784599558,0,0.161766849947409,1.76673214768315,0.969750506270444,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.648540907100142,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,4.61882975416512,0,0,0,0,0,0.238043640886014,0.195133647857799,0.788175720530955,0.8858587585951,0.478364305972461,4.26044618260919,5.87128938344045,3.03763023021174,0,0,0.983528546038072,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,1.17335854031855,0,0,0.16488625294148,0,0.180938774784468,0,0,0.291480836629851,0,10.0813819670733,0.619160603889667,3.51869602002452,0.188368457004691,5.33107488111998,8.46479240864134,0,0,0,0,0,0,0,0,0.655087691238533,0,0.0826534557253359,0,0.518459893167171,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0,0.487289403698762,0.577271049841977,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p@chr12:100881304..100881307,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:100881304..100881307,+ | |||
|id=chr12:100881304..100881307,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.34e-07!6;CL:0000556!1.34e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.26e-18,6;CL:0000556,1.26e-18,6;CL:0002031,1.44e-12,25;CL:0000050,3.45e-12,9;CL:0002027,1.30e-09,3;CL:0002006,1.30e-09,3;CL:0002024,1.30e-09,3;CL:0000988,2.40e-09,32;CL:0002032,2.40e-09,32;CL:0000037,2.40e-09,32;CL:0000837,2.40e-09,32;CL:0000839,3.21e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.22e-09,3;DOID:4045,1.22e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!3.06e-09!193;UBERON:0004120!3.06e-09!193;UBERON:0006603!3.06e-09!193;UBERON:0002390!4.16e-08!45;UBERON:0003061!4.16e-08!45;UBERON:0002193!4.35e-08!48;UBERON:0004177!5.56e-08!29;UBERON:0000077!6.18e-08!97;UBERON:0003081!8.13e-08!88;UBERON:0001041!8.41e-08!92;UBERON:0003104!1.90e-07!131;UBERON:0009142!1.90e-07!131;UBERON:0002405!3.38e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,8.09e-09,45;UBERON:0003061,8.09e-09,45;UBERON:0002106,2.51e-08,6;UBERON:0004457,2.51e-08,6;UBERON:0000042,2.51e-08,6;UBERON:0004854,2.51e-08,6;UBERON:0009034,2.51e-08,6;UBERON:0002095,2.51e-08,6;UBERON:0004782,2.51e-08,6;UBERON:0003281,2.51e-08,6;UBERON:0009664,2.51e-08,6;UBERON:0002296,2.51e-08,6;UBERON:0005602,2.51e-08,6;UBERON:0001179,2.51e-08,6;UBERON:0006293,2.51e-08,6;UBERON:0002204,9.32e-08,32;UBERON:0003887,3.47e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,2.53419699873,0,1.88339765048055,0.0797721589953364,6.84802919724823,0,5.66286595086627,11.5410902412201,2.79824751251259,41.7987369099665,39.7631857456642,38.1950686618227,0,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,6.27797446105362,7.0320181007142,3.14114246384279,1.76469446409304,4.78131839470912,1.94204141212461,0,0,0,0,0,0,0,0,0,17.7849562421201,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6174961980173,0.29688427812965,0,0,0,0,0.117588707135705,0,6.92145909656247,0.722996784599558,0,0.161766849947409,1.76673214768315,0.969750506270444,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.648540907100142,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,4.61882975416512,0,0,0,0,0,0.238043640886014,0.195133647857799,0.788175720530955,0.8858587585951,0.478364305972461,4.26044618260919,5.87128938344045,3.03763023021174,0,0,0.983528546038072,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,1.17335854031855,0,0,0.16488625294148,0,0.180938774784468,0,0,0.291480836629851,0,10.0813819670733,0.619160603889667,3.51869602002452,0.188368457004691,5.33107488111998,8.46479240864134,0,0,0,0,0,0,0,0,0.655087691238533,0,0.0826534557253359,0,0.518459893167171,1.86401793926078,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0,0.487289403698762,0.577271049841977,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr12:100881304..100881307,+ | |||
}} |
Revision as of 21:57, 12 September 2013
Short description: | p@chr12:100881304..100881307, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:100881304..100881307, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.26e-18 | 6 |
megakaryocyte | 1.26e-18 | 6 |
hematopoietic lineage restricted progenitor cell | 1.44e-12 | 25 |
megakaryocyte-erythroid progenitor cell | 3.45e-12 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.30e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.30e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.30e-09 | 3 |
hematopoietic cell | 2.40e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.40e-09 | 32 |
hematopoietic stem cell | 2.40e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.40e-09 | 32 |
myeloid lineage restricted progenitor cell | 3.21e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.24e-09 | 48 |
immune system | 1.24e-09 | 48 |
hematopoietic system | 8.09e-09 | 45 |
blood island | 8.09e-09 | 45 |
spleen | 2.51e-08 | 6 |
cavity lining | 2.51e-08 | 6 |
serous membrane | 2.51e-08 | 6 |
gastrointestinal system mesentery | 2.51e-08 | 6 |
stomach region | 2.51e-08 | 6 |
mesentery | 2.51e-08 | 6 |
gastrointestinal system serosa | 2.51e-08 | 6 |
mesentery of stomach | 2.51e-08 | 6 |
gut mesentery | 2.51e-08 | 6 |
dorsal mesentery | 2.51e-08 | 6 |
dorsal mesogastrium | 2.51e-08 | 6 |
peritoneal cavity | 2.51e-08 | 6 |
spleen primordium | 2.51e-08 | 6 |
musculoskeletal system | 9.32e-08 | 32 |
intraembryonic coelom | 3.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.22e-09 | 3 |
muscle cancer | 1.22e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.