FFCP PHASE1:Hg19::chr3:141106549..141106561,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253461|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26636|TSSclassifier=S|UniProt=D6RBC4|association_with_transcript=60bp_to_ENST00000509883,uc010hun.2,uc010huo.2_5end|coexpression_cluster_id=C38|description=CAGE_peak_47_at_ZBTB38_5end|id=chr3:141106549..141106561,+|ontology_enrichment_celltype=CL:1000306!1.02e-07!4;CL:0002547!1.02e-07!4;CL:0000569!1.52e-07!4;CL:0000011!1.52e-07!4|ontology_enrichment_celltype_v019=CL:0000047;1.07e-13;2!CL:0002600;1.07e-13;2!CL:1000306;1.69e-07;4!CL:0002547;1.69e-07;4|ontology_enrichment_celltype_v019_2=CL:0002600,1.07e-13,2;CL:1000306,1.92e-07,4;CL:0002547,1.92e-07,4|ontology_enrichment_development_v019=UBERON:0006215;9.09e-34;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;2.15e-26;1!DOID:4549;2.15e-26;1!DOID:5861;2.15e-26;1!DOID:6496;2.15e-26;1|ontology_enrichment_disease_v019_2=DOID:3371,2.16e-26,1;DOID:4549,2.16e-26,1;DOID:5861,2.16e-26,1;DOID:6496,2.16e-26,1|ontology_enrichment_uberon=UBERON:0001893!2.77e-40!34;UBERON:0001869!1.28e-39!32;UBERON:0002791!4.38e-38!33;UBERON:0002619!1.51e-35!22;UBERON:0001950!5.86e-35!20;UBERON:0002020!1.14e-33!34;UBERON:0003528!1.14e-33!34;UBERON:0002780!1.87e-32!41;UBERON:0001890!1.87e-32!41;UBERON:0006240!1.87e-32!41;UBERON:0003080!1.52e-31!42;UBERON:0001049!4.03e-31!57;UBERON:0005068!4.03e-31!57;UBERON:0006241!4.03e-31!57;UBERON:0007135!4.03e-31!57;UBERON:0000956!6.99e-31!25;UBERON:0000203!6.99e-31!25;UBERON:0001017!2.14e-28!82;UBERON:0002616!1.99e-27!59;UBERON:0005743!1.07e-26!86;UBERON:0000955!6.49e-24!69;UBERON:0006238!6.49e-24!69;UBERON:0000073!2.17e-23!94;UBERON:0001016!2.17e-23!94;UBERON:0003056!1.05e-21!61;UBERON:0003075!1.05e-19!86;UBERON:0007284!1.05e-19!86;UBERON:0002346!1.68e-18!90;UBERON:0001871!4.89e-16!7;UBERON:0000153!1.19e-13!129;UBERON:0007811!1.19e-13!129;UBERON:0000033!1.28e-13!123;UBERON:0004121!3.77e-12!169;UBERON:0007023!7.09e-12!115;UBERON:0000924!1.13e-11!173;UBERON:0006601!1.13e-11!173;UBERON:0000025!1.67e-11!194;UBERON:0000200!2.00e-11!6;UBERON:0002420!3.97e-11!9;UBERON:0007245!3.97e-11!9;UBERON:0010009!3.97e-11!9;UBERON:0010011!3.97e-11!9;UBERON:0000454!3.97e-11!9;UBERON:0001872!9.59e-10!5;UBERON:0004111!1.38e-09!241;UBERON:0002021!2.52e-09!5;UBERON:0000349!2.94e-09!5;UBERON:0000477!6.55e-09!286;UBERON:0002771!1.19e-08!3;UBERON:0000415!1.02e-07!4;UBERON:0007240!1.02e-07!4;UBERON:0005742!1.02e-07!4;UBERON:0005734!1.02e-07!4;UBERON:0004664!1.02e-07!4;UBERON:0004663!1.02e-07!4;UBERON:0000064!4.57e-07!219;UBERON:0000369!5.95e-07!4;UBERON:0002435!5.95e-07!4;UBERON:0000204!5.95e-07!4;UBERON:0010082!5.95e-07!4;UBERON:0009663!8.21e-07!7;UBERON:0001876!8.22e-07!2|ontology_enrichment_uberon_v019=UBERON:0002037;1.85e-17;6!UBERON:0002680;5.51e-12;9!UBERON:0001895;5.51e-12;9!UBERON:0002418;1.01e-09;3!UBERON:0004755;1.01e-09;3!UBERON:0004733;3.13e-09;12!UBERON:0002028;3.13e-09;12!UBERON:0004732;1.36e-08;13!UBERON:0004797;1.69e-07;4!UBERON:0000415;1.69e-07;4!UBERON:0007240;1.69e-07;4!UBERON:0005742;1.69e-07;4!UBERON:0005734;1.69e-07;4!UBERON:0004664;1.69e-07;4!UBERON:0004663;1.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.44e-17,6;UBERON:0006215,1.44e-17,6;UBERON:0002680,4.67e-12,9;UBERON:0001895,4.67e-12,9;UBERON:0010092,4.67e-12,9;UBERON:0002418,1.01e-09,3;UBERON:0004755,1.01e-09,3;UBERON:0004733,2.77e-09,12;UBERON:0002028,2.77e-09,12;UBERON:0007277,2.77e-09,12;UBERON:0004732,1.22e-08,13;UBERON:0003076,1.31e-07,15;UBERON:0003057,1.31e-07,15;UBERON:0000415,1.92e-07,4;UBERON:0007240,1.92e-07,4;UBERON:0005742,1.92e-07,4;UBERON:0005734,1.92e-07,4;UBERON:0004664,1.92e-07,4;UBERON:0004663,1.92e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,1.19168262731897,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=253461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26636 | |||
|TSSclassifier=S | |||
|UniProt=D6RBC4 | |||
|association_with_transcript=60bp_to_ENST00000509883,uc010hun.2,uc010huo.2_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_47_at_ZBTB38_5end | |||
|id=chr3:141106549..141106561,+ | |||
|ontology_enrichment_celltype=CL:1000306!1.02e-07!4;CL:0002547!1.02e-07!4;CL:0000569!1.52e-07!4;CL:0000011!1.52e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-13;2!CL:0002600;1.07e-13;2!CL:1000306;1.69e-07;4!CL:0002547;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,1.07e-13,2;CL:1000306,1.92e-07,4;CL:0002547,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.09e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.15e-26;1!DOID:4549;2.15e-26;1!DOID:5861;2.15e-26;1!DOID:6496;2.15e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.16e-26,1;DOID:4549,2.16e-26,1;DOID:5861,2.16e-26,1;DOID:6496,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.77e-40!34;UBERON:0001869!1.28e-39!32;UBERON:0002791!4.38e-38!33;UBERON:0002619!1.51e-35!22;UBERON:0001950!5.86e-35!20;UBERON:0002020!1.14e-33!34;UBERON:0003528!1.14e-33!34;UBERON:0002780!1.87e-32!41;UBERON:0001890!1.87e-32!41;UBERON:0006240!1.87e-32!41;UBERON:0003080!1.52e-31!42;UBERON:0001049!4.03e-31!57;UBERON:0005068!4.03e-31!57;UBERON:0006241!4.03e-31!57;UBERON:0007135!4.03e-31!57;UBERON:0000956!6.99e-31!25;UBERON:0000203!6.99e-31!25;UBERON:0001017!2.14e-28!82;UBERON:0002616!1.99e-27!59;UBERON:0005743!1.07e-26!86;UBERON:0000955!6.49e-24!69;UBERON:0006238!6.49e-24!69;UBERON:0000073!2.17e-23!94;UBERON:0001016!2.17e-23!94;UBERON:0003056!1.05e-21!61;UBERON:0003075!1.05e-19!86;UBERON:0007284!1.05e-19!86;UBERON:0002346!1.68e-18!90;UBERON:0001871!4.89e-16!7;UBERON:0000153!1.19e-13!129;UBERON:0007811!1.19e-13!129;UBERON:0000033!1.28e-13!123;UBERON:0004121!3.77e-12!169;UBERON:0007023!7.09e-12!115;UBERON:0000924!1.13e-11!173;UBERON:0006601!1.13e-11!173;UBERON:0000025!1.67e-11!194;UBERON:0000200!2.00e-11!6;UBERON:0002420!3.97e-11!9;UBERON:0007245!3.97e-11!9;UBERON:0010009!3.97e-11!9;UBERON:0010011!3.97e-11!9;UBERON:0000454!3.97e-11!9;UBERON:0001872!9.59e-10!5;UBERON:0004111!1.38e-09!241;UBERON:0002021!2.52e-09!5;UBERON:0000349!2.94e-09!5;UBERON:0000477!6.55e-09!286;UBERON:0002771!1.19e-08!3;UBERON:0000415!1.02e-07!4;UBERON:0007240!1.02e-07!4;UBERON:0005742!1.02e-07!4;UBERON:0005734!1.02e-07!4;UBERON:0004664!1.02e-07!4;UBERON:0004663!1.02e-07!4;UBERON:0000064!4.57e-07!219;UBERON:0000369!5.95e-07!4;UBERON:0002435!5.95e-07!4;UBERON:0000204!5.95e-07!4;UBERON:0010082!5.95e-07!4;UBERON:0009663!8.21e-07!7;UBERON:0001876!8.22e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.85e-17;6!UBERON:0002680;5.51e-12;9!UBERON:0001895;5.51e-12;9!UBERON:0002418;1.01e-09;3!UBERON:0004755;1.01e-09;3!UBERON:0004733;3.13e-09;12!UBERON:0002028;3.13e-09;12!UBERON:0004732;1.36e-08;13!UBERON:0004797;1.69e-07;4!UBERON:0000415;1.69e-07;4!UBERON:0007240;1.69e-07;4!UBERON:0005742;1.69e-07;4!UBERON:0005734;1.69e-07;4!UBERON:0004664;1.69e-07;4!UBERON:0004663;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.44e-17,6;UBERON:0006215,1.44e-17,6;UBERON:0002680,4.67e-12,9;UBERON:0001895,4.67e-12,9;UBERON:0010092,4.67e-12,9;UBERON:0002418,1.01e-09,3;UBERON:0004755,1.01e-09,3;UBERON:0004733,2.77e-09,12;UBERON:0002028,2.77e-09,12;UBERON:0007277,2.77e-09,12;UBERON:0004732,1.22e-08,13;UBERON:0003076,1.31e-07,15;UBERON:0003057,1.31e-07,15;UBERON:0000415,1.92e-07,4;UBERON:0007240,1.92e-07,4;UBERON:0005742,1.92e-07,4;UBERON:0005734,1.92e-07,4;UBERON:0004664,1.92e-07,4;UBERON:0004663,1.92e-07,4 | |||
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|short_description=p47@ZBTB38 | |||
}} |
Revision as of 21:50, 12 September 2013
Short description: | p47@ZBTB38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_47_at_ZBTB38_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 60bp_to_ENST00000509883, uc010hun.2, uc010huo.2_5end |
EntrezGene: | ZBTB38 |
HGNC: | 26636 |
UniProt: | D6RBC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 1.07e-13 | 2 |
fibroblast of tunica adventitia of artery | 1.92e-07 | 4 |
fibroblast of the aortic adventitia | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.44e-17 | 6 |
rhombic lip | 1.44e-17 | 6 |
regional part of metencephalon | 4.67e-12 | 9 |
metencephalon | 4.67e-12 | 9 |
future metencephalon | 4.67e-12 | 9 |
cartilage tissue | 1.01e-09 | 3 |
skeletal tissue | 1.01e-09 | 3 |
segmental subdivision of hindbrain | 2.77e-09 | 12 |
hindbrain | 2.77e-09 | 12 |
presumptive hindbrain | 2.77e-09 | 12 |
segmental subdivision of nervous system | 1.22e-08 | 13 |
posterior neural tube | 1.31e-07 | 15 |
chordal neural plate | 1.31e-07 | 15 |
artery wall | 1.92e-07 | 4 |
tunica adventitia of artery | 1.92e-07 | 4 |
adventitia | 1.92e-07 | 4 |
tunica adventitia of blood vessel | 1.92e-07 | 4 |
aorta tunica adventitia | 1.92e-07 | 4 |
aorta wall | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.16e-26 | 1 |
extraosseous chondrosarcoma | 2.16e-26 | 1 |
myxoid chondrosarcoma | 2.16e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.16e-26 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.