FFCP PHASE1:Hg19::chr3:122746538..122746562,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54437|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10737|TSSclassifier=S|UniProt=D3YTI7|association_with_transcript=0bp_to_ENST00000418793_5end|coexpression_cluster_id=C4274|description=CAGE_peak_2_at_SEMA5B_5end|id=chr3:122746538..122746562,-|ontology_enrichment_celltype=CL:0000047!2.14e-10!8;CL:0000540!4.59e-08!6;CL:0000031!4.59e-08!6;CL:0000404!4.59e-08!6;CL:0002319!7.70e-08!25;CL:0000133!3.08e-07!59;CL:0002322!7.06e-07!5|ontology_enrichment_celltype_v019=CL:0000540;1.29e-13;6!CL:0000404;1.29e-13;6!CL:0002322;1.97e-11;5!CL:0002321;8.48e-09;15!CL:0002319;2.46e-08;25|ontology_enrichment_celltype_v019_2=CL:0000047,4.57e-18,8;CL:0000540,1.02e-13,6;CL:0000031,1.02e-13,6;CL:0000404,1.02e-13,6;CL:0002322,1.66e-11,5;CL:0002319,2.36e-08,25;CL:0000133,6.82e-07,59|ontology_enrichment_development_v019=CL:0000031;1.29e-13;6!UBERON:0006601;7.99e-07;82|ontology_enrichment_disease=DOID:3095!1.67e-10!22;DOID:2994!1.67e-10!22;DOID:171!6.22e-09!10|ontology_enrichment_disease_v019=DOID:171;2.80e-08;10!DOID:3095;4.83e-07;22!DOID:2994;4.83e-07;22|ontology_enrichment_disease_v019_2=DOID:171,3.82e-08,10;DOID:3095,6.14e-07,22;DOID:2994,6.14e-07,22|ontology_enrichment_uberon=UBERON:0000073!9.97e-36!94;UBERON:0001016!9.97e-36!94;UBERON:0001017!7.61e-35!82;UBERON:0005743!9.14e-34!86;UBERON:0001893!2.30e-32!34;UBERON:0002020!1.12e-31!34;UBERON:0003528!1.12e-31!34;UBERON:0002791!2.75e-31!33;UBERON:0001869!5.27e-31!32;UBERON:0007023!1.03e-30!115;UBERON:0001049!7.20e-29!57;UBERON:0005068!7.20e-29!57;UBERON:0006241!7.20e-29!57;UBERON:0007135!7.20e-29!57;UBERON:0002780!1.70e-28!41;UBERON:0001890!1.70e-28!41;UBERON:0006240!1.70e-28!41;UBERON:0003080!1.64e-27!42;UBERON:0002346!7.39e-25!90;UBERON:0000955!1.48e-24!69;UBERON:0006238!1.48e-24!69;UBERON:0000956!1.66e-24!25;UBERON:0000203!1.66e-24!25;UBERON:0002616!2.68e-24!59;UBERON:0000924!6.65e-24!173;UBERON:0006601!6.65e-24!173;UBERON:0003075!9.26e-22!86;UBERON:0007284!9.26e-22!86;UBERON:0002619!2.22e-21!22;UBERON:0004121!2.54e-21!169;UBERON:0001950!9.27e-20!20;UBERON:0003056!3.91e-19!61;UBERON:0000153!5.87e-17!129;UBERON:0007811!5.87e-17!129;UBERON:0000033!1.55e-15!123;UBERON:0000922!7.02e-11!612;UBERON:0000468!1.90e-09!659;UBERON:0002308!1.41e-08!9;UBERON:0000125!1.41e-08!9;UBERON:0002050!6.82e-08!605;UBERON:0005423!6.82e-08!605;UBERON:0000923!1.70e-07!604;UBERON:0005291!1.70e-07!604;UBERON:0006598!1.70e-07!604;UBERON:0002532!1.70e-07!604;UBERON:0009663!2.10e-07!7;UBERON:0000025!2.90e-07!194;UBERON:0002420!3.22e-07!9;UBERON:0007245!3.22e-07!9;UBERON:0010009!3.22e-07!9;UBERON:0010011!3.22e-07!9;UBERON:0000454!3.22e-07!9;UBERON:0000200!3.99e-07!6;UBERON:0001871!4.62e-07!7|ontology_enrichment_uberon_v019=UBERON:0001869;5.82e-34;32!UBERON:0001893;1.63e-32;34!UBERON:0000956;5.09e-32;25!UBERON:0000203;5.09e-32;25!UBERON:0002791;5.17e-32;32!UBERON:0002619;2.44e-29;22!UBERON:0001950;2.72e-29;20!UBERON:0003528;8.76e-29;34!UBERON:0002020;8.76e-29;34!UBERON:0002780;2.13e-27;41!UBERON:0001890;2.13e-27;41!UBERON:0000922;2.35e-21;49!UBERON:0000073;8.38e-17;53!UBERON:0002616;8.38e-17;53!UBERON:0001017;8.99e-13;75!UBERON:0000955;2.68e-12;68!UBERON:0001016;1.11e-11;83!UBERON:0002021;3.84e-11;5!UBERON:0000200;1.62e-08;6!UBERON:0002050;4.57e-08;5!UBERON:0005423;4.57e-08;5!UBERON:0001871;6.28e-08;6!UBERON:0001872;3.29e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.01e-39,89;UBERON:0001893,7.70e-39,34;UBERON:0001869,1.02e-38,32;UBERON:0001017,3.38e-38,81;UBERON:0002780,3.90e-36,41;UBERON:0001890,3.90e-36,41;UBERON:0003080,3.90e-36,41;UBERON:0006240,3.90e-36,41;UBERON:0002791,1.77e-35,32;UBERON:0003528,5.08e-33,34;UBERON:0002020,5.08e-33,34;UBERON:0000956,2.16e-32,25;UBERON:0000203,2.16e-32,25;UBERON:0002619,9.77e-30,22;UBERON:0001950,1.09e-29,20;UBERON:0001049,1.03e-28,56;UBERON:0005068,1.03e-28,56;UBERON:0006241,1.03e-28,56;UBERON:0007135,1.03e-28,56;UBERON:0000073,2.11e-28,53;UBERON:0002616,2.11e-28,53;UBERON:0000955,1.53e-23,68;UBERON:0006238,1.53e-23,68;UBERON:0003056,1.69e-23,61;UBERON:0004121,3.66e-23,171;UBERON:0000924,3.66e-23,171;UBERON:0006601,3.66e-23,171;UBERON:0002346,5.06e-23,86;UBERON:0003075,9.46e-20,82;UBERON:0007284,9.46e-20,82;UBERON:0010371,6.72e-16,104;UBERON:0011216,8.32e-16,223;UBERON:0010314,3.11e-15,132;UBERON:0007023,1.00e-13,114;UBERON:0002021,4.75e-11,5;UBERON:0000200,7.58e-09,6;UBERON:0000922,1.40e-08,592;UBERON:0001871,7.01e-08,6;UBERON:0000025,2.17e-07,192;UBERON:0001872,2.20e-07,5;UBERON:0001870,6.98e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,3.13454721478088,12.0219114595044,0.821246550437305,5.52387614217132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54437 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10737 | |||
|TSSclassifier=S | |||
|UniProt=D3YTI7 | |||
|association_with_transcript=0bp_to_ENST00000418793_5end | |||
|coexpression_cluster_id=C4274 | |||
|description=CAGE_peak_2_at_SEMA5B_5end | |||
|id=chr3:122746538..122746562,- | |||
|ontology_enrichment_celltype=CL:0000047!2.14e-10!8;CL:0000540!4.59e-08!6;CL:0000031!4.59e-08!6;CL:0000404!4.59e-08!6;CL:0002319!7.70e-08!25;CL:0000133!3.08e-07!59;CL:0002322!7.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.29e-13;6!CL:0000404;1.29e-13;6!CL:0002322;1.97e-11;5!CL:0002321;8.48e-09;15!CL:0002319;2.46e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.57e-18,8;CL:0000540,1.02e-13,6;CL:0000031,1.02e-13,6;CL:0000404,1.02e-13,6;CL:0002322,1.66e-11,5;CL:0002319,2.36e-08,25;CL:0000133,6.82e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.29e-13;6!UBERON:0006601;7.99e-07;82 | |||
|ontology_enrichment_disease=DOID:3095!1.67e-10!22;DOID:2994!1.67e-10!22;DOID:171!6.22e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.80e-08;10!DOID:3095;4.83e-07;22!DOID:2994;4.83e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.82e-08,10;DOID:3095,6.14e-07,22;DOID:2994,6.14e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.97e-36!94;UBERON:0001016!9.97e-36!94;UBERON:0001017!7.61e-35!82;UBERON:0005743!9.14e-34!86;UBERON:0001893!2.30e-32!34;UBERON:0002020!1.12e-31!34;UBERON:0003528!1.12e-31!34;UBERON:0002791!2.75e-31!33;UBERON:0001869!5.27e-31!32;UBERON:0007023!1.03e-30!115;UBERON:0001049!7.20e-29!57;UBERON:0005068!7.20e-29!57;UBERON:0006241!7.20e-29!57;UBERON:0007135!7.20e-29!57;UBERON:0002780!1.70e-28!41;UBERON:0001890!1.70e-28!41;UBERON:0006240!1.70e-28!41;UBERON:0003080!1.64e-27!42;UBERON:0002346!7.39e-25!90;UBERON:0000955!1.48e-24!69;UBERON:0006238!1.48e-24!69;UBERON:0000956!1.66e-24!25;UBERON:0000203!1.66e-24!25;UBERON:0002616!2.68e-24!59;UBERON:0000924!6.65e-24!173;UBERON:0006601!6.65e-24!173;UBERON:0003075!9.26e-22!86;UBERON:0007284!9.26e-22!86;UBERON:0002619!2.22e-21!22;UBERON:0004121!2.54e-21!169;UBERON:0001950!9.27e-20!20;UBERON:0003056!3.91e-19!61;UBERON:0000153!5.87e-17!129;UBERON:0007811!5.87e-17!129;UBERON:0000033!1.55e-15!123;UBERON:0000922!7.02e-11!612;UBERON:0000468!1.90e-09!659;UBERON:0002308!1.41e-08!9;UBERON:0000125!1.41e-08!9;UBERON:0002050!6.82e-08!605;UBERON:0005423!6.82e-08!605;UBERON:0000923!1.70e-07!604;UBERON:0005291!1.70e-07!604;UBERON:0006598!1.70e-07!604;UBERON:0002532!1.70e-07!604;UBERON:0009663!2.10e-07!7;UBERON:0000025!2.90e-07!194;UBERON:0002420!3.22e-07!9;UBERON:0007245!3.22e-07!9;UBERON:0010009!3.22e-07!9;UBERON:0010011!3.22e-07!9;UBERON:0000454!3.22e-07!9;UBERON:0000200!3.99e-07!6;UBERON:0001871!4.62e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.82e-34;32!UBERON:0001893;1.63e-32;34!UBERON:0000956;5.09e-32;25!UBERON:0000203;5.09e-32;25!UBERON:0002791;5.17e-32;32!UBERON:0002619;2.44e-29;22!UBERON:0001950;2.72e-29;20!UBERON:0003528;8.76e-29;34!UBERON:0002020;8.76e-29;34!UBERON:0002780;2.13e-27;41!UBERON:0001890;2.13e-27;41!UBERON:0000922;2.35e-21;49!UBERON:0000073;8.38e-17;53!UBERON:0002616;8.38e-17;53!UBERON:0001017;8.99e-13;75!UBERON:0000955;2.68e-12;68!UBERON:0001016;1.11e-11;83!UBERON:0002021;3.84e-11;5!UBERON:0000200;1.62e-08;6!UBERON:0002050;4.57e-08;5!UBERON:0005423;4.57e-08;5!UBERON:0001871;6.28e-08;6!UBERON:0001872;3.29e-07;5 | |||
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|short_description=p2@SEMA5B | |||
}} |
Revision as of 21:11, 12 September 2013
Short description: | p2@SEMA5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SEMA5B_5end |
Coexpression cluster: | C4274_neuroectodermal_neuroepithelioma_neuroblastoma_Astrocyte_peripheral_Neural_parietal |
Association with transcript: | 0bp_to_ENST00000418793_5end |
EntrezGene: | SEMA5B |
HGNC: | 10737 |
UniProt: | D3YTI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.57e-18 | 8 |
neuron | 1.02e-13 | 6 |
neuroblast | 1.02e-13 | 6 |
electrically signaling cell | 1.02e-13 | 6 |
embryonic stem cell | 1.66e-11 | 5 |
neural cell | 2.36e-08 | 25 |
neurectodermal cell | 6.82e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.82e-08 | 10 |
germ cell and embryonal cancer | 6.14e-07 | 22 |
germ cell cancer | 6.14e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.