FFCP PHASE1:Hg19::chr3:112930946..112930997,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=91653|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17173|TSSclassifier=S|UniProt=C9J9M5|association_with_transcript=-44bp_to_ENST00000462425_5end|description=CAGE_peak_6_at_BOC_5end|id=chr3:112930946..112930997,+|ontology_enrichment_celltype=CL:0000057!3.97e-09!75;CL:0000055!2.67e-08!180;CL:0002620!2.30e-07!23|ontology_enrichment_celltype_v019=CL:0002620;1.96e-09;23|ontology_enrichment_celltype_v019_2=CL:0002620,3.82e-09,23;CL:0000057,4.66e-08,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.17e-16!129;UBERON:0007811!2.17e-16!129;UBERON:0000033!3.73e-16!123;UBERON:0000475!3.06e-15!365;UBERON:0003102!2.22e-13!95;UBERON:0004121!3.53e-13!169;UBERON:0000924!1.99e-12!173;UBERON:0006601!1.99e-12!173;UBERON:0003075!1.84e-11!86;UBERON:0007284!1.84e-11!86;UBERON:0001049!1.09e-10!57;UBERON:0005068!1.09e-10!57;UBERON:0006241!1.09e-10!57;UBERON:0007135!1.09e-10!57;UBERON:0002616!1.42e-10!59;UBERON:0001017!1.44e-10!82;UBERON:0005743!1.83e-10!86;UBERON:0002346!2.03e-10!90;UBERON:0000062!2.58e-10!511;UBERON:0007023!4.02e-10!115;UBERON:0000955!2.47e-09!69;UBERON:0006238!2.47e-09!69;UBERON:0000073!2.97e-09!94;UBERON:0001016!2.97e-09!94;UBERON:0003056!7.58e-09!61;UBERON:0000481!9.42e-09!347;UBERON:0000468!1.19e-08!659;UBERON:0003080!1.34e-07!42;UBERON:0000467!2.39e-07!625;UBERON:0000064!3.15e-07!219;UBERON:0000480!3.25e-07!626;UBERON:0002780!3.32e-07!41;UBERON:0001890!3.32e-07!41;UBERON:0006240!3.32e-07!41;UBERON:0001444!7.18e-07!48|ontology_enrichment_uberon_v019=UBERON:0000488;4.32e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.92e-15,99;UBERON:0002199,2.21e-08,46;UBERON:0002416,2.21e-08,46;UBERON:0010314,3.32e-08,132;UBERON:0000153,4.72e-08,62;UBERON:0007811,4.72e-08,62;UBERON:0001444,7.20e-08,49;UBERON:0000033,7.74e-08,56;UBERON:0000488,3.71e-07,4;UBERON:0002097,6.33e-07,41|phase1_expression=0.726713517082227,1.07050261945492,1.69145284915165,0,0.893922188854576,0,0,1.89515962028049,0.522371256399677,0.737201809504527,0.697801167972428,0,0.527533956456907,0.74259811776028,1.98838425436749,0.672325146451775,0,0,0,2.21617904538218,3.4680117511523,1.88072832886853,1.14494394852423,1.50561867580173,0.87879847716362,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,2.89151321907653,2.00535164254356,3.76600949298142,0,12.1658717575659,2.45790524626576,2.21729397462564,2.63504357079378,0.327447688744282,4.73583874780305,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0.25326102332916,0.132409180813219,0,0,1.68203280042692,1.06748995729705,1.2333377420858,0,0.134710672069688,0.163461903113459,2.57307626996383,3.45705554687999,0,0,0,0.747243402759005,1.76151747965647,1.61872944368132,1.54495887372473,0,0,0.929932030581889,0,1.7308685049499,0,0.718618141816238,0.168336113954066,0.500474079487857,0,1.75591048352335,1.83892677479412,1.20190447125277,0.113432183160021,1.07633781413317,0.640672166455702,0.847727604638247,1.20036438433761,1.44273540933814,2.31876486041066,2.04728541964749,1.68776332241266,1.07180705677318,1.26216887122057,1.56484827691909,2.58633690910099,0.710019185033229,1.0075209822764,1.01736355386293,0.773043412653187,0.545492241181669,0.286804595389004,0.243947412259191,0.132529768321485,0.580969714347592,0.207322110030741,0.504641701751257,0.72995471815166,0,1.28648187638577,0,0,0,0,0.505754070234305,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0,3.60292401626904,0.98775256867763,0,0.603173834469785,1.574003567695,0,0,0,1.62302566965108,0.70445216541493,0,0,0,0,0,0,0,0,2.81201501960331,1.34385702559088,0.425325291727159,0.447792613514241,0.581267877027924,0,0,0,0.207328115540772,0,0,0.698476837213859,0.763976851116555,0,0,0.205654985406647,0,0,1.00917975910825,1.30788020649984,1.39342743059805,0.258543431515556,0,1.690605505112,0.797814349754612,0,0.257207374262142,0,0.799266537048298,0.285955987316295,1.62786481617433,0,1.95441710576241,1.06617584622764,0,0.904318131178758,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,1.01637849688985,0,1.54657762555539,0.335032530668698,0.637938751653163,0,0,0,2.94459580125936,0,0.813795071099207,0.623912584592421,0.892144943985809,0.788512075169673,2.10854546986884,0,2.27407504055985,0,0.664225598535437,2.02806085395873,0.260650843404249,1.95801157462741,1.02943027143257,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0.306923946576125,1.12264037773229,1.15325234330131,0.511707249066704,0.482561763430822,1.48418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7366,0.193766729508018,0.496597714366863,0,3.69153518013356,3.43599221228973,0.870866991587845,1.36893320434112,0.606168477131288,2.29511057256564,4.9899053481902,0.162806537221949,0,1.9307228228694,0,0,2.07810455110873,1.22068853494722,2.66302709674205,0.603821380773079,0|short_description=p6@BOC}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=91653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17173 | |||
|TSSclassifier=S | |||
|UniProt=C9J9M5 | |||
|association_with_transcript=-44bp_to_ENST00000462425_5end | |||
|description=CAGE_peak_6_at_BOC_5end | |||
|id=chr3:112930946..112930997,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.97e-09!75;CL:0000055!2.67e-08!180;CL:0002620!2.30e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.96e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.82e-09,23;CL:0000057,4.66e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.17e-16!129;UBERON:0007811!2.17e-16!129;UBERON:0000033!3.73e-16!123;UBERON:0000475!3.06e-15!365;UBERON:0003102!2.22e-13!95;UBERON:0004121!3.53e-13!169;UBERON:0000924!1.99e-12!173;UBERON:0006601!1.99e-12!173;UBERON:0003075!1.84e-11!86;UBERON:0007284!1.84e-11!86;UBERON:0001049!1.09e-10!57;UBERON:0005068!1.09e-10!57;UBERON:0006241!1.09e-10!57;UBERON:0007135!1.09e-10!57;UBERON:0002616!1.42e-10!59;UBERON:0001017!1.44e-10!82;UBERON:0005743!1.83e-10!86;UBERON:0002346!2.03e-10!90;UBERON:0000062!2.58e-10!511;UBERON:0007023!4.02e-10!115;UBERON:0000955!2.47e-09!69;UBERON:0006238!2.47e-09!69;UBERON:0000073!2.97e-09!94;UBERON:0001016!2.97e-09!94;UBERON:0003056!7.58e-09!61;UBERON:0000481!9.42e-09!347;UBERON:0000468!1.19e-08!659;UBERON:0003080!1.34e-07!42;UBERON:0000467!2.39e-07!625;UBERON:0000064!3.15e-07!219;UBERON:0000480!3.25e-07!626;UBERON:0002780!3.32e-07!41;UBERON:0001890!3.32e-07!41;UBERON:0006240!3.32e-07!41;UBERON:0001444!7.18e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.32e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.92e-15,99;UBERON:0002199,2.21e-08,46;UBERON:0002416,2.21e-08,46;UBERON:0010314,3.32e-08,132;UBERON:0000153,4.72e-08,62;UBERON:0007811,4.72e-08,62;UBERON:0001444,7.20e-08,49;UBERON:0000033,7.74e-08,56;UBERON:0000488,3.71e-07,4;UBERON:0002097,6.33e-07,41 | |||
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| |||
|short_description=p6@BOC | |||
}} |
Revision as of 20:49, 12 September 2013
Short description: | p6@BOC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_BOC_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000462425_5end |
EntrezGene: | BOC |
HGNC: | 17173 |
UniProt: | C9J9M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.82e-09 | 23 |
fibroblast | 4.66e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.92e-15 | 99 |
integument | 2.21e-08 | 46 |
integumental system | 2.21e-08 | 46 |
structure with developmental contribution from neural crest | 3.32e-08 | 132 |
anterior region of body | 4.72e-08 | 62 |
craniocervical region | 4.72e-08 | 62 |
subdivision of head | 7.20e-08 | 49 |
head | 7.74e-08 | 56 |
atypical epithelium | 3.71e-07 | 4 |
skin of body | 6.33e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.