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FFCP PHASE1:Mm9::chr11:69651505..69651540,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=216856|HGNC=|MCL_coexpression_id=108|UniProt=Q69ZK9|association_with_transcript=-219bp_to_ENSMUST00000108634,uc007jrx.1_5end|description=CAGE_peak_3_at_Nlgn2_5end|id=chr11:69651505..69651540,-|ontology_enrichment_celltype=CL:0000540!1.95e-15!33;CL:0000047!1.95e-15!33;CL:0000031!1.95e-15!33;CL:0000404!1.95e-15!33;CL:0000221!3.02e-14!44;CL:0000133!3.02e-14!44;CL:0002319!3.70e-14!43;CL:0000393!6.87e-14!39;CL:0000211!6.87e-14!39;CL:0000055!2.66e-12!50;CL:0000117!2.65e-11!23;CL:0000337!2.65e-11!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.93e-17,33;CL:0000047,1.93e-17,33;CL:0000031,1.93e-17,33;CL:0000404,1.93e-17,33;CL:0000221,6.90e-16,44;CL:0000133,6.90e-16,44;CL:0002319,8.74e-16,43;CL:0000393,4.89e-15,39;CL:0000211,4.89e-15,39;CL:0000117,1.04e-12,23;CL:0000337,1.04e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.35e-23!73;UBERON:0005743!6.35e-23!73;UBERON:0000073!3.13e-22!75;UBERON:0001016!3.13e-22!75;UBERON:0004121!3.14e-21!102;UBERON:0000924!3.14e-21!102;UBERON:0006601!3.14e-21!102;UBERON:0002346!8.50e-19!71;UBERON:0003075!8.50e-19!71;UBERON:0007284!8.50e-19!71;UBERON:0001049!8.20e-16!52;UBERON:0005068!8.20e-16!52;UBERON:0006241!8.20e-16!52;UBERON:0007135!8.20e-16!52;UBERON:0000033!1.32e-15!63;UBERON:0000955!3.25e-14!50;UBERON:0006238!3.25e-14!50;UBERON:0002616!7.39e-14!49;UBERON:0003056!2.19e-13!49;UBERON:0003080!6.62e-11!40;UBERON:0002780!1.74e-10!39;UBERON:0001890!1.74e-10!39;UBERON:0006240!1.74e-10!39;UBERON:0002020!5.20e-09!34;UBERON:0000153!4.59e-08!94;UBERON:0002791!5.67e-07!29;UBERON:0003528!5.67e-07!29;UBERON:0001893!5.67e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.65e-24,73;UBERON:0001016,2.46e-23,75;UBERON:0004121,7.79e-22,95;UBERON:0000924,7.79e-22,95;UBERON:0006601,7.79e-22,95;UBERON:0002346,2.13e-20,64;UBERON:0003075,2.13e-20,64;UBERON:0007284,2.13e-20,64;UBERON:0010371,6.61e-18,73;UBERON:0000073,1.14e-16,54;UBERON:0001049,3.03e-16,52;UBERON:0005068,3.03e-16,52;UBERON:0006241,3.03e-16,52;UBERON:0007135,3.03e-16,52;UBERON:0000955,1.31e-13,47;UBERON:0006238,1.31e-13,47;UBERON:0002616,3.24e-13,46;UBERON:0003056,3.84e-13,49;UBERON:0010314,2.99e-11,92;UBERON:0003080,8.65e-11,40;UBERON:0002780,2.51e-10,39;UBERON:0001890,2.51e-10,39;UBERON:0006240,2.51e-10,39;UBERON:0002020,1.10e-08,34|phase1_expression=1.76163731815273,0,0,0,0,0.33575854382378,0,0,0.422366166455,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0,0.522399578277871,0,0,0,0,0.215471232685889,0,0,0,0,1.84519436275371,0,0,0.166234645358492,0.408338712524738,0,0,0,0.588231488031014,0,0,1.76255545165808,1.21652317463417,1.10128051297009,5.47673941043627,1.30815093828268,1.5378032791413,2.13872888981712,0.979904951377538,0,0,0,0,1.28629718017973,0.85960031981627,0.515672092277442,6.27181028664753,6.87688273053643,6.33831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0,0,1.79760066311043,1.92109152660777,4.87341177849845,4.99521971827255,4.41682418837902,3.42781181284564,1.98781686856452,4.16468717330844,5.17565543498476,6.43453150627015,2.20231761998777,1.53224805702225,3.84016333140609,5.93488294785872,5.30628332893976,6.25096044668112,1.11673199600552,1.12552522006336,2.59757021220577,3.83017161115768,4.12877874317399,5.03278503728312,0.227178579999552,1.43585964202892,1.73918693221007,0,0,0,0,0,0.561777680527007,2.04516387093669,1.55871602761721,1.41335829804136,1.69012103732017,3.84979432242953,0,0,0.649473123033642,0.506719730950197,0,0.22836775943812,0,0.29688427812965,1.56136794089522,0.913396434936424,1.61430848079241,1.80867168663147,1.41106448562846,0.251333182659351,0.247194967734374,0.578397427679647,0.884610551949874,1.45590164952668,0.662524555381181,0,0,2.63502717310392,3.14170060220183,0.255457055208591,0.11981512450592,0,0,3.2953940669061,0.915001205637253,3.76963056338593,1.21677024134594,1.79000820131231,2.49345653471472,2.43361894601636,1.62942982160506,0.746441823660558,0.252722758433675,0.420883711772948,4.42409506073193,1.37941262660084,4.86167750474443,6.48030716693575,5.17077393550092,4.35586648968489,4.02917415606834,0.776110112217047,3.23351989399263,4.53854592402766,3.87092473160687,4.16471891612392,2.78047249225598,1.74126083261083,1.85203922767149,2.18937693500343,0,0.51469581422943,0,1.65700618028402,0.938104239924385,0.900310307305074,0.946978942340841,0,0.925602677324269,0.697601834251224,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.729619285912702,1.16959989940266,0.219550115291051,0.536825675041487,0.630869845692382,4.11618449517138,0,0,4.05247676016945,2.55460339046482,2.44848176511977,1.4117846723634,1.77902435075896,0.951128130562796,0,0.164698954724011,0,0.397912944082302,0.974820435595601,0.898819408654221,0,0,1.70701110857774,2.05647322697512,1.1270773567308,1.22190796707189,2.13347735884388,0.841629838683823,1.07502113111237,0.442830443938806,0.784993639206874,0.246794327843601,0,0.83422552858047,0.393117990226406,0.449724224769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|EntrezGene=216856
|HGNC=
|MCL_coexpression_id=108
|UniProt=Q69ZK9
|association_with_transcript=-219bp_to_ENSMUST00000108634,uc007jrx.1_5end
|description=CAGE_peak_3_at_Nlgn2_5end
|id=chr11:69651505..69651540,-
|ontology_enrichment_celltype=CL:0000540!1.95e-15!33;CL:0000047!1.95e-15!33;CL:0000031!1.95e-15!33;CL:0000404!1.95e-15!33;CL:0000221!3.02e-14!44;CL:0000133!3.02e-14!44;CL:0002319!3.70e-14!43;CL:0000393!6.87e-14!39;CL:0000211!6.87e-14!39;CL:0000055!2.66e-12!50;CL:0000117!2.65e-11!23;CL:0000337!2.65e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.93e-17,33;CL:0000047,1.93e-17,33;CL:0000031,1.93e-17,33;CL:0000404,1.93e-17,33;CL:0000221,6.90e-16,44;CL:0000133,6.90e-16,44;CL:0002319,8.74e-16,43;CL:0000393,4.89e-15,39;CL:0000211,4.89e-15,39;CL:0000117,1.04e-12,23;CL:0000337,1.04e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.35e-23!73;UBERON:0005743!6.35e-23!73;UBERON:0000073!3.13e-22!75;UBERON:0001016!3.13e-22!75;UBERON:0004121!3.14e-21!102;UBERON:0000924!3.14e-21!102;UBERON:0006601!3.14e-21!102;UBERON:0002346!8.50e-19!71;UBERON:0003075!8.50e-19!71;UBERON:0007284!8.50e-19!71;UBERON:0001049!8.20e-16!52;UBERON:0005068!8.20e-16!52;UBERON:0006241!8.20e-16!52;UBERON:0007135!8.20e-16!52;UBERON:0000033!1.32e-15!63;UBERON:0000955!3.25e-14!50;UBERON:0006238!3.25e-14!50;UBERON:0002616!7.39e-14!49;UBERON:0003056!2.19e-13!49;UBERON:0003080!6.62e-11!40;UBERON:0002780!1.74e-10!39;UBERON:0001890!1.74e-10!39;UBERON:0006240!1.74e-10!39;UBERON:0002020!5.20e-09!34;UBERON:0000153!4.59e-08!94;UBERON:0002791!5.67e-07!29;UBERON:0003528!5.67e-07!29;UBERON:0001893!5.67e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.65e-24,73;UBERON:0001016,2.46e-23,75;UBERON:0004121,7.79e-22,95;UBERON:0000924,7.79e-22,95;UBERON:0006601,7.79e-22,95;UBERON:0002346,2.13e-20,64;UBERON:0003075,2.13e-20,64;UBERON:0007284,2.13e-20,64;UBERON:0010371,6.61e-18,73;UBERON:0000073,1.14e-16,54;UBERON:0001049,3.03e-16,52;UBERON:0005068,3.03e-16,52;UBERON:0006241,3.03e-16,52;UBERON:0007135,3.03e-16,52;UBERON:0000955,1.31e-13,47;UBERON:0006238,1.31e-13,47;UBERON:0002616,3.24e-13,46;UBERON:0003056,3.84e-13,49;UBERON:0010314,2.99e-11,92;UBERON:0003080,8.65e-11,40;UBERON:0002780,2.51e-10,39;UBERON:0001890,2.51e-10,39;UBERON:0006240,2.51e-10,39;UBERON:0002020,1.10e-08,34
|phase1_expression=1.76163731815273,0,0,0,0,0.33575854382378,0,0,0.422366166455,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0,0.522399578277871,0,0,0,0,0.215471232685889,0,0,0,0,1.84519436275371,0,0,0.166234645358492,0.408338712524738,0,0,0,0.588231488031014,0,0,1.76255545165808,1.21652317463417,1.10128051297009,5.47673941043627,1.30815093828268,1.5378032791413,2.13872888981712,0.979904951377538,0,0,0,0,1.28629718017973,0.85960031981627,0.515672092277442,6.27181028664753,6.87688273053643,6.33831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0,0,1.79760066311043,1.92109152660777,4.87341177849845,4.99521971827255,4.41682418837902,3.42781181284564,1.98781686856452,4.16468717330844,5.17565543498476,6.43453150627015,2.20231761998777,1.53224805702225,3.84016333140609,5.93488294785872,5.30628332893976,6.25096044668112,1.11673199600552,1.12552522006336,2.59757021220577,3.83017161115768,4.12877874317399,5.03278503728312,0.227178579999552,1.43585964202892,1.73918693221007,0,0,0,0,0,0.561777680527007,2.04516387093669,1.55871602761721,1.41335829804136,1.69012103732017,3.84979432242953,0,0,0.649473123033642,0.506719730950197,0,0.22836775943812,0,0.29688427812965,1.56136794089522,0.913396434936424,1.61430848079241,1.80867168663147,1.41106448562846,0.251333182659351,0.247194967734374,0.578397427679647,0.884610551949874,1.45590164952668,0.662524555381181,0,0,2.63502717310392,3.14170060220183,0.255457055208591,0.11981512450592,0,0,3.2953940669061,0.915001205637253,3.76963056338593,1.21677024134594,1.79000820131231,2.49345653471472,2.43361894601636,1.62942982160506,0.746441823660558,0.252722758433675,0.420883711772948,4.42409506073193,1.37941262660084,4.86167750474443,6.48030716693575,5.17077393550092,4.35586648968489,4.02917415606834,0.776110112217047,3.23351989399263,4.53854592402766,3.87092473160687,4.16471891612392,2.78047249225598,1.74126083261083,1.85203922767149,2.18937693500343,0,0.51469581422943,0,1.65700618028402,0.938104239924385,0.900310307305074,0.946978942340841,0,0.925602677324269,0.697601834251224,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.729619285912702,1.16959989940266,0.219550115291051,0.536825675041487,0.630869845692382,4.11618449517138,0,0,4.05247676016945,2.55460339046482,2.44848176511977,1.4117846723634,1.77902435075896,0.951128130562796,0,0.164698954724011,0,0.397912944082302,0.974820435595601,0.898819408654221,0,0,1.70701110857774,2.05647322697512,1.1270773567308,1.22190796707189,2.13347735884388,0.841629838683823,1.07502113111237,0.442830443938806,0.784993639206874,0.246794327843601,0,0.83422552858047,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,1.01850340712568,0.575392274901621,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.923765950833023,1.32643988239339,2.77040459951444,1.52770577197669,1.17345124144251,2.51259386162724,1.6663054862021,0.975668239288994,0.945810864637146,1.10732344824387,1.59454768657487,1.14704320301017,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0.551873492609465,3.85321415970701,3.16471553798949,0.655739781506702,0,2.52406575533005,3.51394869866975,3.87762115919038,1.67278158566786,5.34716817797746,4.81230102341015,3.23848561339915,2.92255857911312,6.7198922250909,2.57057053137446,1.27746076687442,1.95872164033981,2.44330439030364,1.97964147567043,0,0.728341908464944,0.302323556964751,0.943025398779491,0.885905678642318,3.68922177532713,1.03371317267288,0.727067458955011,1.06949213515416,0,0,0,2.38307724027652,4.68158844481407,4.65691261617916,3.42939256050548,2.6601035046341,3.92411398724555,2.30368628842969,1.8267896946876,0.23467170806371,0.42366414172764,0,0.98931751764888,1.13025098687134,1.44751019827574,1.19372344003136,0.656563598980245,0.291480836629851,3.15223013417866,0.170870880797853,0.82554747185289,1.29636169158798,0.565105371014073,0.136694227721025,0.228778173206523,0.679913719975421,0.69975726161829,0.276399947608848,0,3.79603192297362,2.23651413839534,1.51207477150522,1.67270636811575,0.87345025498471,0.944050424693745,0.661227645802687,0.785267825952089,0.518459893167171,0,0.56369293868419,3.28936401296753,1.32366792365678,1.16670713006429,1.03327858782185,1.18269287843545,1.5256441023948,0.781226309063701,1.04859344425711,0.483168241652012,0,0,1.01362607645082,0.410843828659309,0,0.537080087002444,0.596044064343795,0.120195449519969,0.738447635872886,0.100966449948148,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0.226730383615211,0.443971906748129,0.358855426437903,0.167884616364078,0.772758376128762,1.31377732815827,1.83151624267265,0.857473516316263,0,3.3885110557024,0.920650473014354,0.572895513439397,1.89038500578056,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.35942722695261,0.51776031175182,1.86817225651518,8.37952234142165,2.73173769206615,1.94485373654635,1.46729213839588,1.47074806760011,0.888986911206461,2.47242068686673,1.92551525755089,1.26348605881899,1.77435509923168,2.45214243801899,2.34103768674706,2.68905640100451,2.69946704091382,2.85776214769844,2.31768651889711,1.54327376370964,2.06042950401653,1.61918812147837,3.42869252385415,2.48466128623072,2.38436189947321,1.45346416632329,1.69396884747595,2.28459441307527,1.64635175585495,1.31534855718921,1.7654534799962,1.68342681497322,2.25406534435931,2.26560309463796,2.45538625901814,1.54936841185966,3.2794123866794,4.24677982494508,2.57324769289949,1.50409737833809,2.48674831689496,1.32354851471709,1.62307484934295
|short_description=p3@Nlgn2
}}

Revision as of 20:39, 12 September 2013

Short description:p3@Nlgn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nlgn2_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: -219bp_to_ENSMUST00000108634, uc007jrx.1_5end
EntrezGene:Nlgn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nlgn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.18
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C65.17
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.93e-1733
neuronal stem cell1.93e-1733
neuroblast1.93e-1733
electrically signaling cell1.93e-1733
ectodermal cell6.90e-1644
neurectodermal cell6.90e-1644
neural cell8.74e-1643
electrically responsive cell4.89e-1539
electrically active cell4.89e-1539
CNS neuron (sensu Vertebrata)1.04e-1223
neuroblast (sensu Vertebrata)1.04e-1223







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