FFCP PHASE1:Mm9::chr11:69479077..69479088,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69479077..69479088,-|id=chr11:69479077..69479088,-|ontology_enrichment_celltype=CL:0002194!3.33e-07!4;CL:0000766!3.33e-07!4;CL:0000576!3.33e-07!4;CL:0000235!3.33e-07!4;CL:0002009!3.33e-07!4;CL:0000040!3.33e-07!4;CL:0000559!3.33e-07!4|ontology_enrichment_celltype_v019_2=CL:0002194,5.95e-39,4;CL:0000766,5.95e-39,4;CL:0000234,5.95e-39,4;CL:0000576,5.95e-39,4;CL:0000235,5.95e-39,4;CL:0000864,5.95e-39,4;CL:0002009,5.95e-39,4;CL:0000040,5.95e-39,4;CL:0000559,5.95e-39,4;CL:0002092,1.16e-30,3;CL:0002540,1.16e-30,3;CL:0000473,1.64e-22,7;CL:0000557,1.64e-22,7;CL:0002476,2.00e-20,2;CL:0000878,3.13e-20,2;CL:0000129,3.13e-20,2;CL:0000839,2.46e-12,13;CL:0002320,2.39e-10,46;CL:0000134,2.39e-10,46;CL:0000763,4.28e-10,16;CL:0000738,1.60e-09,17;CL:0002087,1.60e-09,17;CL:0000219,8.80e-09,54;CL:0000049,1.48e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.29e-09!32;UBERON:0001474!5.31e-09!22;UBERON:0004765!5.31e-09!22;UBERON:0001434!5.31e-09!22;UBERON:0007823!2.72e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.55e-30,16;UBERON:0001474,3.67e-28,22;UBERON:0004765,3.67e-28,22;UBERON:0001434,3.67e-28,22;UBERON:0002204,2.45e-19,32;UBERON:0002390,1.40e-10,45;UBERON:0003061,1.40e-10,45;UBERON:0002384,2.39e-10,46;UBERON:0002193,6.59e-10,48;UBERON:0002405,6.59e-10,48;UBERON:0003081,6.19e-07,87|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0,0,22.0475430733943,26.6993917893083,20.6039233334369,5.69240209984969,4.2264013585371,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,1.76922110389975,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,18.0949540727127,4.89515115436839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.847328283455281,0,0,0,0.120625849856312,0.238744688006273,0,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr11:69479077..69479088,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69479077..69479088,- | |||
|id=chr11:69479077..69479088,- | |||
|ontology_enrichment_celltype=CL:0002194!3.33e-07!4;CL:0000766!3.33e-07!4;CL:0000576!3.33e-07!4;CL:0000235!3.33e-07!4;CL:0002009!3.33e-07!4;CL:0000040!3.33e-07!4;CL:0000559!3.33e-07!4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.95e-39,4;CL:0000766,5.95e-39,4;CL:0000234,5.95e-39,4;CL:0000576,5.95e-39,4;CL:0000235,5.95e-39,4;CL:0000864,5.95e-39,4;CL:0002009,5.95e-39,4;CL:0000040,5.95e-39,4;CL:0000559,5.95e-39,4;CL:0002092,1.16e-30,3;CL:0002540,1.16e-30,3;CL:0000473,1.64e-22,7;CL:0000557,1.64e-22,7;CL:0002476,2.00e-20,2;CL:0000878,3.13e-20,2;CL:0000129,3.13e-20,2;CL:0000839,2.46e-12,13;CL:0002320,2.39e-10,46;CL:0000134,2.39e-10,46;CL:0000763,4.28e-10,16;CL:0000738,1.60e-09,17;CL:0002087,1.60e-09,17;CL:0000219,8.80e-09,54;CL:0000049,1.48e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.29e-09!32;UBERON:0001474!5.31e-09!22;UBERON:0004765!5.31e-09!22;UBERON:0001434!5.31e-09!22;UBERON:0007823!2.72e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.55e-30,16;UBERON:0001474,3.67e-28,22;UBERON:0004765,3.67e-28,22;UBERON:0001434,3.67e-28,22;UBERON:0002204,2.45e-19,32;UBERON:0002390,1.40e-10,45;UBERON:0003061,1.40e-10,45;UBERON:0002384,2.39e-10,46;UBERON:0002193,6.59e-10,48;UBERON:0002405,6.59e-10,48;UBERON:0003081,6.19e-07,87 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0,0,22.0475430733943,26.6993917893083,20.6039233334369,5.69240209984969,4.2264013585371,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,1.76922110389975,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,18.0949540727127,4.89515115436839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.847328283455281,0,0,0,0.120625849856312,0.238744688006273,0,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr11:69479077..69479088,- | |||
}} |
Revision as of 20:38, 12 September 2013
Short description: | p@chr11:69479077..69479088, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69479077..69479088, - |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.95e-39 | 4 |
myeloid leukocyte | 5.95e-39 | 4 |
phagocyte | 5.95e-39 | 4 |
monocyte | 5.95e-39 | 4 |
macrophage | 5.95e-39 | 4 |
tissue-resident macrophage | 5.95e-39 | 4 |
macrophage dendritic cell progenitor | 5.95e-39 | 4 |
monoblast | 5.95e-39 | 4 |
promonocyte | 5.95e-39 | 4 |
bone marrow cell | 1.16e-30 | 3 |
mesenchymal stem cell of the bone marrow | 1.16e-30 | 3 |
defensive cell | 1.64e-22 | 7 |
granulocyte monocyte progenitor cell | 1.64e-22 | 7 |
bone marrow macrophage | 2.00e-20 | 2 |
central nervous system macrophage | 3.13e-20 | 2 |
microglial cell | 3.13e-20 | 2 |
myeloid lineage restricted progenitor cell | 2.46e-12 | 13 |
connective tissue cell | 2.39e-10 | 46 |
mesenchymal cell | 2.39e-10 | 46 |
myeloid cell | 4.28e-10 | 16 |
leukocyte | 1.60e-09 | 17 |
nongranular leukocyte | 1.60e-09 | 17 |
motile cell | 8.80e-09 | 54 |
common myeloid progenitor | 1.48e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.55e-30 | 16 |
bone element | 3.67e-28 | 22 |
skeletal element | 3.67e-28 | 22 |
skeletal system | 3.67e-28 | 22 |
musculoskeletal system | 2.45e-19 | 32 |
hematopoietic system | 1.40e-10 | 45 |
blood island | 1.40e-10 | 45 |
connective tissue | 2.39e-10 | 46 |
hemolymphoid system | 6.59e-10 | 48 |
immune system | 6.59e-10 | 48 |
lateral plate mesoderm | 6.19e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.