FFCP PHASE1:Mm9::chr11:69469086..69469110,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1579|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69469086..69469110,+|id=chr11:69469086..69469110,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,6.26e-16,3;CL:0000351,6.26e-16,3;CL:0000068,2.04e-15,3;CL:0002202,2.04e-15,3;CL:0000069,2.04e-15,3;CL:0002632,2.04e-15,3;CL:0002368,2.04e-15,3;CL:0000307,2.04e-15,3;CL:0000377,2.04e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.09e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000161,3.03e-20,5;UBERON:0000358,6.26e-16,3;UBERON:0000307,6.26e-16,3;UBERON:0007010,6.26e-16,3;UBERON:0000162,1.04e-15,3;UBERON:0001353,1.04e-15,3;UBERON:0000163,1.04e-15,3;UBERON:0006866,1.04e-15,3;UBERON:0001046,1.04e-15,3;UBERON:0000164,1.04e-15,3;UBERON:0000931,1.04e-15,3;UBERON:0003126,2.04e-15,3;UBERON:0001005,2.04e-15,3;UBERON:0007196,2.04e-15,3;UBERON:0001558,2.04e-15,3;UBERON:0001255,1.55e-12,1;UBERON:0001556,1.55e-12,1;UBERON:0000996,3.34e-12,1;UBERON:0001723,7.11e-12,1;UBERON:0001033,7.11e-12,1;UBERON:0010056,7.11e-12,1;UBERON:0004122,8.04e-10,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,1.77351905832569,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.599162557619291,0.457500602818626,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0.16488625294148,0.807322133479528,0.241251699712623,0.835606408021955,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.756037385752609,0.627264888043406,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.299033092087958,0.165458490457098,0,0,0,0,0,0.314578033277133,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0.443971906748129,8.16396095146229,3.18980771091749,4.056981474676,0,0,1.92931541171159,0.501572104035363,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0|short_description=p@chr11:69469086..69469110,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1579 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69469086..69469110,+ | |||
|id=chr11:69469086..69469110,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.26e-16,3;CL:0000351,6.26e-16,3;CL:0000068,2.04e-15,3;CL:0002202,2.04e-15,3;CL:0000069,2.04e-15,3;CL:0002632,2.04e-15,3;CL:0002368,2.04e-15,3;CL:0000307,2.04e-15,3;CL:0000377,2.04e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.09e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,3.03e-20,5;UBERON:0000358,6.26e-16,3;UBERON:0000307,6.26e-16,3;UBERON:0007010,6.26e-16,3;UBERON:0000162,1.04e-15,3;UBERON:0001353,1.04e-15,3;UBERON:0000163,1.04e-15,3;UBERON:0006866,1.04e-15,3;UBERON:0001046,1.04e-15,3;UBERON:0000164,1.04e-15,3;UBERON:0000931,1.04e-15,3;UBERON:0003126,2.04e-15,3;UBERON:0001005,2.04e-15,3;UBERON:0007196,2.04e-15,3;UBERON:0001558,2.04e-15,3;UBERON:0001255,1.55e-12,1;UBERON:0001556,1.55e-12,1;UBERON:0000996,3.34e-12,1;UBERON:0001723,7.11e-12,1;UBERON:0001033,7.11e-12,1;UBERON:0010056,7.11e-12,1;UBERON:0004122,8.04e-10,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,1.77351905832569,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.599162557619291,0.457500602818626,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0.16488625294148,0.807322133479528,0.241251699712623,0.835606408021955,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.756037385752609,0.627264888043406,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0,0,0.56369293868419,0.299033092087958,0.165458490457098,0,0,0,0,0,0.314578033277133,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0.443971906748129,8.16396095146229,3.18980771091749,4.056981474676,0,0,1.92931541171159,0.501572104035363,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:69469086..69469110,+ | |||
}} |
Revision as of 20:38, 12 September 2013
Short description: | p@chr11:69469086..69469110, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69469086..69469110, + |
Coexpression cluster: | MCL_coexpression_mm9:1579 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.26e-16 | 3 |
trophoblast cell | 6.26e-16 | 3 |
duct epithelial cell | 2.04e-15 | 3 |
epithelial cell of tracheobronchial tree | 2.04e-15 | 3 |
branched duct epithelial cell | 2.04e-15 | 3 |
epithelial cell of lower respiratory tract | 2.04e-15 | 3 |
respiratory epithelial cell | 2.04e-15 | 3 |
tracheal epithelial cell | 2.04e-15 | 3 |
tracheoblast | 2.04e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
orifice | 3.03e-20 | 5 |
blastocyst | 6.26e-16 | 3 |
blastula | 6.26e-16 | 3 |
cleaving embryo | 6.26e-16 | 3 |
cloaca | 1.04e-15 | 3 |
anal region | 1.04e-15 | 3 |
embryonic cloaca | 1.04e-15 | 3 |
terminal part of digestive tract | 1.04e-15 | 3 |
hindgut | 1.04e-15 | 3 |
primitive urogenital sinus | 1.04e-15 | 3 |
proctodeum | 1.04e-15 | 3 |
trachea | 2.04e-15 | 3 |
respiratory airway | 2.04e-15 | 3 |
tracheobronchial tree | 2.04e-15 | 3 |
lower respiratory tract | 2.04e-15 | 3 |
urinary bladder | 1.55e-12 | 1 |
lower urinary tract | 1.55e-12 | 1 |
vagina | 3.34e-12 | 1 |
tongue | 7.11e-12 | 1 |
gustatory system | 7.11e-12 | 1 |
future tongue | 7.11e-12 | 1 |
genitourinary system | 8.04e-10 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.