FFCP PHASE1:Mm9::chr11:59700717..59700721,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:59700717..59700721,+|id=chr11:59700717..59700721,+|ontology_enrichment_celltype=CL:0000473!2.56e-25!3;CL:0000627!2.56e-25!3;CL:0000682!2.56e-25!3;CL:0000239!6.43e-22!6;CL:0000677!6.43e-22!6;CL:0000212!6.43e-22!6;CL:0000584!6.43e-22!6;CL:0000075!7.55e-19!7;CL:0000066!1.15e-15!25;CL:0002563!9.55e-15!9;CL:0002251!9.55e-15!9;CL:0002076!5.68e-09!15;CL:0000223!8.68e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,7.89e-34,3;CL:0000239,2.03e-29,6;CL:0000677,2.03e-29,6;CL:0000584,2.03e-29,6;CL:0000075,2.63e-25,7;CL:0000066,1.57e-21,25;CL:0002563,8.21e-20,9;CL:0002251,8.21e-20,9;CL:0000473,5.81e-15,7;CL:0002076,4.38e-12,15;CL:0000223,3.63e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.31e-25!15;UBERON:0001962!1.72e-16!2;UBERON:0001961!1.72e-16!2;UBERON:0001744!1.72e-16!2;UBERON:0004923!6.47e-16!24;UBERON:0001242!1.57e-15!13;UBERON:0000060!1.57e-15!13;UBERON:0001262!1.57e-15!13;UBERON:0004786!1.57e-15!13;UBERON:0003350!9.55e-15!9;UBERON:0004808!9.55e-15!9;UBERON:0001277!9.55e-15!9;UBERON:0000485!3.97e-12!11;UBERON:0002465!2.51e-11!3;UBERON:0003199!3.65e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.21e-20,9;UBERON:0004808,8.21e-20,9;UBERON:0001277,8.21e-20,9;UBERON:0000344,2.69e-18,15;UBERON:0000485,2.63e-16,11;UBERON:0001242,7.12e-14,13;UBERON:0001262,7.12e-14,13;UBERON:0004786,7.12e-14,13;UBERON:0003199,7.11e-12,1;UBERON:0004923,1.53e-11,24|phase1_expression=0,3.14077866875425,5.45999087267443,0,0,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.14704640533585,4.01962374880514,3.4460959692726,4.74036711908956,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:59700717..59700721,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:59700717..59700721,+ | |||
|id=chr11:59700717..59700721,+ | |||
|ontology_enrichment_celltype=CL:0000473!2.56e-25!3;CL:0000627!2.56e-25!3;CL:0000682!2.56e-25!3;CL:0000239!6.43e-22!6;CL:0000677!6.43e-22!6;CL:0000212!6.43e-22!6;CL:0000584!6.43e-22!6;CL:0000075!7.55e-19!7;CL:0000066!1.15e-15!25;CL:0002563!9.55e-15!9;CL:0002251!9.55e-15!9;CL:0002076!5.68e-09!15;CL:0000223!8.68e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.89e-34,3;CL:0000239,2.03e-29,6;CL:0000677,2.03e-29,6;CL:0000584,2.03e-29,6;CL:0000075,2.63e-25,7;CL:0000066,1.57e-21,25;CL:0002563,8.21e-20,9;CL:0002251,8.21e-20,9;CL:0000473,5.81e-15,7;CL:0002076,4.38e-12,15;CL:0000223,3.63e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.31e-25!15;UBERON:0001962!1.72e-16!2;UBERON:0001961!1.72e-16!2;UBERON:0001744!1.72e-16!2;UBERON:0004923!6.47e-16!24;UBERON:0001242!1.57e-15!13;UBERON:0000060!1.57e-15!13;UBERON:0001262!1.57e-15!13;UBERON:0004786!1.57e-15!13;UBERON:0003350!9.55e-15!9;UBERON:0004808!9.55e-15!9;UBERON:0001277!9.55e-15!9;UBERON:0000485!3.97e-12!11;UBERON:0002465!2.51e-11!3;UBERON:0003199!3.65e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.21e-20,9;UBERON:0004808,8.21e-20,9;UBERON:0001277,8.21e-20,9;UBERON:0000344,2.69e-18,15;UBERON:0000485,2.63e-16,11;UBERON:0001242,7.12e-14,13;UBERON:0001262,7.12e-14,13;UBERON:0004786,7.12e-14,13;UBERON:0003199,7.11e-12,1;UBERON:0004923,1.53e-11,24 | |||
|phase1_expression=0,3.14077866875425,5.45999087267443,0,0,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.14704640533585,4.01962374880514,3.4460959692726,4.74036711908956,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:59700717..59700721,+ | |||
}} |
Revision as of 20:11, 12 September 2013
Short description: | p@chr11:59700717..59700721, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:59700717..59700721, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.89e-34 | 3 |
brush border epithelial cell | 2.03e-29 | 6 |
gut absorptive cell | 2.03e-29 | 6 |
enterocyte | 2.03e-29 | 6 |
columnar/cuboidal epithelial cell | 2.63e-25 | 7 |
epithelial cell | 1.57e-21 | 25 |
intestinal epithelial cell | 8.21e-20 | 9 |
epithelial cell of alimentary canal | 8.21e-20 | 9 |
defensive cell | 5.81e-15 | 7 |
endo-epithelial cell | 4.38e-12 | 15 |
endodermal cell | 3.63e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.21e-20 | 9 |
gastrointestinal system epithelium | 8.21e-20 | 9 |
intestinal epithelium | 8.21e-20 | 9 |
mucosa | 2.69e-18 | 15 |
simple columnar epithelium | 2.63e-16 | 11 |
intestinal mucosa | 7.12e-14 | 13 |
wall of intestine | 7.12e-14 | 13 |
gastrointestinal system mucosa | 7.12e-14 | 13 |
egg chamber | 7.11e-12 | 1 |
organ component layer | 1.53e-11 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.