FFCP PHASE1:Mm9::chr11:53328816..53328818,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:53328816..53328818,+|id=chr11:53328816..53328818,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,5.64e-30,3;CL:0002540,5.64e-30,3;CL:0002194,1.39e-22,4;CL:0000766,1.39e-22,4;CL:0000234,1.39e-22,4;CL:0000576,1.39e-22,4;CL:0000235,1.39e-22,4;CL:0000864,1.39e-22,4;CL:0002009,1.39e-22,4;CL:0000040,1.39e-22,4;CL:0000559,1.39e-22,4;CL:0000473,2.07e-13,7;CL:0000557,2.07e-13,7;CL:0000878,3.12e-12,2;CL:0000129,3.12e-12,2;CL:0002476,5.17e-12,2;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000839,1.05e-07,13;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.70e-22,16;UBERON:0001474,1.26e-16,22;UBERON:0004765,1.26e-16,22;UBERON:0001434,1.26e-16,22;UBERON:0002204,1.03e-11,32;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,4.04954872776629,0,5.6838409195688,0.898800331555214,5.37905627450176,0,0,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,3.01582567878545,0,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0|short_description=p@chr11:53328816..53328818,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:53328816..53328818,+ | |||
|id=chr11:53328816..53328818,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,5.64e-30,3;CL:0002540,5.64e-30,3;CL:0002194,1.39e-22,4;CL:0000766,1.39e-22,4;CL:0000234,1.39e-22,4;CL:0000576,1.39e-22,4;CL:0000235,1.39e-22,4;CL:0000864,1.39e-22,4;CL:0002009,1.39e-22,4;CL:0000040,1.39e-22,4;CL:0000559,1.39e-22,4;CL:0000473,2.07e-13,7;CL:0000557,2.07e-13,7;CL:0000878,3.12e-12,2;CL:0000129,3.12e-12,2;CL:0002476,5.17e-12,2;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000839,1.05e-07,13;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.70e-22,16;UBERON:0001474,1.26e-16,22;UBERON:0004765,1.26e-16,22;UBERON:0001434,1.26e-16,22;UBERON:0002204,1.03e-11,32;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,4.04954872776629,0,5.6838409195688,0.898800331555214,5.37905627450176,0,0,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,3.01582567878545,0,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr11:53328816..53328818,+ | |||
}} |
Revision as of 19:57, 12 September 2013
Short description: | p@chr11:53328816..53328818, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:53328816..53328818, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 5.64e-30 | 3 |
mesenchymal stem cell of the bone marrow | 5.64e-30 | 3 |
monopoietic cell | 1.39e-22 | 4 |
myeloid leukocyte | 1.39e-22 | 4 |
phagocyte | 1.39e-22 | 4 |
monocyte | 1.39e-22 | 4 |
macrophage | 1.39e-22 | 4 |
tissue-resident macrophage | 1.39e-22 | 4 |
macrophage dendritic cell progenitor | 1.39e-22 | 4 |
monoblast | 1.39e-22 | 4 |
promonocyte | 1.39e-22 | 4 |
defensive cell | 2.07e-13 | 7 |
granulocyte monocyte progenitor cell | 2.07e-13 | 7 |
central nervous system macrophage | 3.12e-12 | 2 |
microglial cell | 3.12e-12 | 2 |
bone marrow macrophage | 5.17e-12 | 2 |
connective tissue cell | 2.15e-08 | 46 |
mesenchymal cell | 2.15e-08 | 46 |
myeloid lineage restricted progenitor cell | 1.05e-07 | 13 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.70e-22 | 16 |
bone element | 1.26e-16 | 22 |
skeletal element | 1.26e-16 | 22 |
skeletal system | 1.26e-16 | 22 |
musculoskeletal system | 1.03e-11 | 32 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
connective tissue | 2.15e-08 | 46 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.