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FFCP PHASE1:Mm9::chr11:51103240..51103256,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=237759|HGNC=|UniProt=Q8K4G2|association_with_transcript=-165bp_to_ENSMUST00000102765,NM_153393,uc007itv.2_5end|description=CAGE_peak_2_at_Col23a1_5end|id=chr11:51103240..51103256,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,2.59e-08,2;CL:0000197,7.82e-08,2;CL:0002491,7.82e-08,2;CL:0000098,7.82e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.98e-07!14;UBERON:0000117!2.98e-07!14;UBERON:0000171!2.98e-07!14;UBERON:0000170!2.98e-07!14;UBERON:0005597!2.98e-07!14;UBERON:0000118!2.98e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.31e-14,6;UBERON:0005174,1.31e-14,6;UBERON:0001137,1.31e-14,6;UBERON:0001948,6.89e-12,5;UBERON:0002315,6.89e-12,5;UBERON:0003076,3.27e-10,12;UBERON:0003057,3.27e-10,12;UBERON:0002256,2.59e-08,2;UBERON:0002048,5.80e-08,14;UBERON:0000117,5.80e-08,14;UBERON:0000171,5.80e-08,14;UBERON:0000170,5.80e-08,14;UBERON:0005597,5.80e-08,14;UBERON:0000118,5.80e-08,14;UBERON:0004766,7.82e-08,2;UBERON:0008193,7.82e-08,2;UBERON:0005913,7.82e-08,2;UBERON:0011158,7.82e-08,2;UBERON:0005744,7.82e-08,2;UBERON:0003457,7.82e-08,2;UBERON:0008001,7.82e-08,2;UBERON:0007497,7.82e-08,2;UBERON:0009955,7.82e-08,2;UBERON:0003067,7.82e-08,2;UBERON:0002546,7.82e-08,2;UBERON:0007914,7.82e-08,2;UBERON:0005253,7.82e-08,2;UBERON:0002227,7.82e-08,2;UBERON:0001846,7.82e-08,2;UBERON:0004339,7.82e-08,2;UBERON:0002105,7.82e-08,2;UBERON:0001678,7.82e-08,2;UBERON:0003128,7.82e-08,2;UBERON:0001694,7.82e-08,2;UBERON:0004681,7.82e-08,2;UBERON:0001839,7.82e-08,2;UBERON:0001690,7.82e-08,2;UBERON:0001844,7.82e-08,2;UBERON:0001849,7.82e-08,2;UBERON:0002499,7.82e-08,2;UBERON:0001855,7.82e-08,2;UBERON:0011137,7.82e-08,2;UBERON:0001703,7.82e-08,2;UBERON:0010323,7.82e-08,2;UBERON:0003129,7.82e-08,2;UBERON:0003069,7.82e-08,2;UBERON:0003051,7.82e-08,2;UBERON:0004637,7.82e-08,2;UBERON:0004761,7.82e-08,2;UBERON:0010113,7.82e-08,2;UBERON:0009123,7.82e-08,2;UBERON:0010351,7.82e-08,2;UBERON:0009617,7.82e-08,2;UBERON:0005641,7.82e-08,2;UBERON:0010349,7.82e-08,2|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.912392380975631,0,7.04152209913235,0,0.878744730937887,0.58328969722285,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,2.28520787523043,2.42955395046775,0,0,0,0,0,0,0.131886287730194,0.365950574409639,0,0,1.12552522006336,0.61119299110724,2.65165726926301,1.42371680799103,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,1.15307748628029,0.753613202763113,0.823120949949934,0.251333182659351,0,0.289198713839823,0,0.647067399789637,0.220841518460394,0,1.86391761218122,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0.248813941220186,0.505445516867349,0.841767423545896,0.520481771850815,0.689706313300419,0.540186389416048,0.452114453507145,1.08858398642125,1.5373646434182,1.03071897015702,0.258703370739016,0.431135985865684,0.756424320671277,0.527853372491847,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.583826711835847,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,0,0.205809224758569,0,0,1.06644125267617,1.39342003116263,0.77320476793256,0.80673409849337,0.667134131534611,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.189667900953082,0.456994050438915,2.25415471346161,0.610953983535943,0,0.140271639780637,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21703828199926,0.189491411770485,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,1.19021820443007,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,1.3109065177259,1.20879487306127,1.01254341007058,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.28528526568723,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.857348140126369,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,0.291480836629851,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0,0.495920734352016,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,1.29092962510329,0.781226309063701,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.682934423016537,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0,1.23625770240992,0.735994600671987,0.342869252385415,0.177475806159338,0,0.726732083161643,0.282328141245992,0.846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0,0.701794825336225,0.214871054048298,0.191288332068843,0.882365676478062,0|short_description=p2@Col23a1}}
|EntrezGene=237759
|HGNC=
|UniProt=Q8K4G2
|association_with_transcript=-165bp_to_ENSMUST00000102765,NM_153393,uc007itv.2_5end
|description=CAGE_peak_2_at_Col23a1_5end
|id=chr11:51103240..51103256,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002611,2.59e-08,2;CL:0000197,7.82e-08,2;CL:0002491,7.82e-08,2;CL:0000098,7.82e-08,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!2.98e-07!14;UBERON:0000117!2.98e-07!14;UBERON:0000171!2.98e-07!14;UBERON:0000170!2.98e-07!14;UBERON:0005597!2.98e-07!14;UBERON:0000118!2.98e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.31e-14,6;UBERON:0005174,1.31e-14,6;UBERON:0001137,1.31e-14,6;UBERON:0001948,6.89e-12,5;UBERON:0002315,6.89e-12,5;UBERON:0003076,3.27e-10,12;UBERON:0003057,3.27e-10,12;UBERON:0002256,2.59e-08,2;UBERON:0002048,5.80e-08,14;UBERON:0000117,5.80e-08,14;UBERON:0000171,5.80e-08,14;UBERON:0000170,5.80e-08,14;UBERON:0005597,5.80e-08,14;UBERON:0000118,5.80e-08,14;UBERON:0004766,7.82e-08,2;UBERON:0008193,7.82e-08,2;UBERON:0005913,7.82e-08,2;UBERON:0011158,7.82e-08,2;UBERON:0005744,7.82e-08,2;UBERON:0003457,7.82e-08,2;UBERON:0008001,7.82e-08,2;UBERON:0007497,7.82e-08,2;UBERON:0009955,7.82e-08,2;UBERON:0003067,7.82e-08,2;UBERON:0002546,7.82e-08,2;UBERON:0007914,7.82e-08,2;UBERON:0005253,7.82e-08,2;UBERON:0002227,7.82e-08,2;UBERON:0001846,7.82e-08,2;UBERON:0004339,7.82e-08,2;UBERON:0002105,7.82e-08,2;UBERON:0001678,7.82e-08,2;UBERON:0003128,7.82e-08,2;UBERON:0001694,7.82e-08,2;UBERON:0004681,7.82e-08,2;UBERON:0001839,7.82e-08,2;UBERON:0001690,7.82e-08,2;UBERON:0001844,7.82e-08,2;UBERON:0001849,7.82e-08,2;UBERON:0002499,7.82e-08,2;UBERON:0001855,7.82e-08,2;UBERON:0011137,7.82e-08,2;UBERON:0001703,7.82e-08,2;UBERON:0010323,7.82e-08,2;UBERON:0003129,7.82e-08,2;UBERON:0003069,7.82e-08,2;UBERON:0003051,7.82e-08,2;UBERON:0004637,7.82e-08,2;UBERON:0004761,7.82e-08,2;UBERON:0010113,7.82e-08,2;UBERON:0009123,7.82e-08,2;UBERON:0010351,7.82e-08,2;UBERON:0009617,7.82e-08,2;UBERON:0005641,7.82e-08,2;UBERON:0010349,7.82e-08,2
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.912392380975631,0,7.04152209913235,0,0.878744730937887,0.58328969722285,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,2.28520787523043,2.42955395046775,0,0,0,0,0,0,0.131886287730194,0.365950574409639,0,0,1.12552522006336,0.61119299110724,2.65165726926301,1.42371680799103,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,1.15307748628029,0.753613202763113,0.823120949949934,0.251333182659351,0,0.289198713839823,0,0.647067399789637,0.220841518460394,0,1.86391761218122,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.324482526135515,0.305518091550949,0.248813941220186,0.505445516867349,0.841767423545896,0.520481771850815,0.689706313300419,0.540186389416048,0.452114453507145,1.08858398642125,1.5373646434182,1.03071897015702,0.258703370739016,0.431135985865684,0.756424320671277,0.527853372491847,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.583826711835847,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,0,0.205809224758569,0,0,1.06644125267617,1.39342003116263,0.77320476793256,0.80673409849337,0.667134131534611,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.189667900953082,0.456994050438915,2.25415471346161,0.610953983535943,0,0.140271639780637,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21703828199926,0.189491411770485,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,1.19021820443007,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,1.3109065177259,1.20879487306127,1.01254341007058,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.28528526568723,0,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.258717367565509,0.857348140126369,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.361877549568935,0.358117032009409,0.328281799490123,0.291480836629851,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.790839983952838,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0,0.495920734352016,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,1.29092962510329,0.781226309063701,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.682934423016537,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0,1.23625770240992,0.735994600671987,0.342869252385415,0.177475806159338,0,0.726732083161643,0.282328141245992,0.846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0,0.701794825336225,0.214871054048298,0.191288332068843,0.882365676478062,0
|short_description=p2@Col23a1
}}

Revision as of 19:51, 12 September 2013

Short description:p2@Col23a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Col23a1_5end
Coexpression cluster:NA
Association with transcript: -165bp_to_ENSMUST00000102765, NM_153393, uc007itv.2_5end
EntrezGene:Col23a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Col23a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the dorsal spinal cord2.59e-082
receptor cell7.82e-082
auditory epithelial cell7.82e-082
sensory epithelial cell7.82e-082

Uber anatomy
Ontology termp-valuen
spinal cord1.31e-146
dorsal region element1.31e-146
dorsum1.31e-146
regional part of spinal cord6.89e-125
gray matter of spinal cord6.89e-125
posterior neural tube3.27e-1012
chordal neural plate3.27e-1012
dorsal horn of spinal cord2.59e-082
lung5.80e-0814
respiratory tube5.80e-0814
respiration organ5.80e-0814
pair of lungs5.80e-0814
lung primordium5.80e-0814
lung bud5.80e-0814
cranial bone7.82e-082
pneumatized bone7.82e-082
zone of bone organ7.82e-082
primary subdivision of skull7.82e-082
cranial conduit7.82e-082
head bone7.82e-082
irregular bone7.82e-082
developing epithelial placode7.82e-082
neurogenic placode7.82e-082
dorsolateral placode7.82e-082
cranial placode7.82e-082
head or neck bone7.82e-082
head mesenchyme7.82e-082
spiral organ of cochlea7.82e-082
internal ear7.82e-082
calvarium7.82e-082
vestibulo-auditory system7.82e-082
temporal bone7.82e-082
cranium7.82e-082
petrous part of temporal bone7.82e-082
vestibular system7.82e-082
bony labyrinth7.82e-082
ear7.82e-082
cochlea7.82e-082
membranous labyrinth7.82e-082
cochlear labyrinth7.82e-082
cochlear duct of membranous labyrinth7.82e-082
axial skeletal system7.82e-082
neurocranium7.82e-082
cranial skeletal system7.82e-082
skull7.82e-082
otic placode7.82e-082
ear vesicle7.82e-082
otic capsule7.82e-082
cartilaginous neurocranium7.82e-082
future membranous labyrinth7.82e-082
otic cup7.82e-082
otic capsule cartilage condensation7.82e-082
head paraxial mesoderm7.82e-082
otocyst epithelium7.82e-082
otic capsule pre-cartilage condensation7.82e-082







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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