FFCP PHASE1:Mm9::chr11:4847359..4847394,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11764|HGNC=|MCL_coexpression_id=1|UniProt=Q8CC13|association_with_transcript=-129bp_to_NM_001243043,uc007hvn.1_5end|description=CAGE_peak_6_at_Ap1b1_5end|id=chr11:4847359..4847394,+|ontology_enrichment_celltype=CL:0000117!3.65e-10!23;CL:0000337!3.65e-10!23;CL:0000540!2.86e-08!33;CL:0000047!2.86e-08!33;CL:0000031!2.86e-08!33;CL:0000404!2.86e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-08,23;CL:0000337,1.08e-08,23;CL:0002610,2.39e-07,3;CL:0002614,5.38e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.47e-24!52;UBERON:0005068!1.47e-24!52;UBERON:0006241!1.47e-24!52;UBERON:0007135!1.47e-24!52;UBERON:0007811!1.62e-24!86;UBERON:0000073!1.68e-23!75;UBERON:0001016!1.68e-23!75;UBERON:0002346!1.89e-23!71;UBERON:0003075!1.89e-23!71;UBERON:0007284!1.89e-23!71;UBERON:0000955!2.46e-23!50;UBERON:0006238!2.46e-23!50;UBERON:0001017!2.96e-23!73;UBERON:0005743!2.96e-23!73;UBERON:0000033!4.13e-23!63;UBERON:0002616!1.45e-22!49;UBERON:0000153!4.34e-21!94;UBERON:0004121!3.06e-20!102;UBERON:0000924!3.06e-20!102;UBERON:0006601!3.06e-20!102;UBERON:0003056!6.85e-19!49;UBERON:0003080!9.30e-19!40;UBERON:0002780!7.13e-18!39;UBERON:0001890!7.13e-18!39;UBERON:0006240!7.13e-18!39;UBERON:0002020!7.80e-18!34;UBERON:0002791!2.91e-14!29;UBERON:0003528!2.91e-14!29;UBERON:0001893!2.91e-14!29;UBERON:0002619!6.94e-10!17;UBERON:0002021!7.12e-10!10;UBERON:0000411!7.12e-10!10;UBERON:0001950!7.12e-10!10;UBERON:0000956!2.20e-09!21;UBERON:0001869!2.20e-09!21;UBERON:0000203!2.20e-09!21;UBERON:0000064!4.09e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-39,54;UBERON:0001049,5.53e-35,52;UBERON:0005068,5.53e-35,52;UBERON:0006241,5.53e-35,52;UBERON:0007135,5.53e-35,52;UBERON:0001017,2.36e-30,73;UBERON:0001016,2.56e-29,75;UBERON:0002346,7.02e-29,64;UBERON:0003075,7.02e-29,64;UBERON:0007284,7.02e-29,64;UBERON:0002020,2.33e-28,34;UBERON:0000955,2.71e-27,47;UBERON:0006238,2.71e-27,47;UBERON:0002616,8.47e-26,46;UBERON:0010371,2.50e-24,73;UBERON:0004121,7.88e-23,95;UBERON:0000924,7.88e-23,95;UBERON:0006601,7.88e-23,95;UBERON:0003080,1.77e-21,40;UBERON:0002021,3.27e-21,10;UBERON:0000411,3.27e-21,10;UBERON:0001950,3.27e-21,10;UBERON:0003528,1.14e-20,29;UBERON:0002791,1.14e-20,29;UBERON:0001893,1.14e-20,29;UBERON:0002780,7.93e-20,39;UBERON:0001890,7.93e-20,39;UBERON:0006240,7.93e-20,39;UBERON:0003056,3.82e-18,49;UBERON:0010314,1.20e-17,92;UBERON:0002619,1.01e-16,17;UBERON:0000956,1.58e-15,21;UBERON:0001869,1.58e-15,21;UBERON:0000203,1.58e-15,21;UBERON:0003076,1.71e-14,12;UBERON:0003057,1.71e-14,12;UBERON:0000025,1.07e-11,114;UBERON:0002240,2.48e-11,6;UBERON:0005174,2.48e-11,6;UBERON:0001137,2.48e-11,6;UBERON:0004111,2.01e-10,122;UBERON:0001948,1.23e-09,5;UBERON:0002315,1.23e-09,5;UBERON:0002950,4.24e-09,4;UBERON:0001891,4.24e-09,4;UBERON:0009616,4.24e-09,4;UBERON:0010286,4.24e-09,4;UBERON:0011216,9.40e-09,194;UBERON:0000483,3.65e-08,174;UBERON:0000119,5.64e-08,176;UBERON:0004684,2.39e-07,3;UBERON:0002275,2.39e-07,3;UBERON:0002038,5.38e-07,3;UBERON:0009663,5.38e-07,3;UBERON:0009661,5.38e-07,3;UBERON:0000125,5.38e-07,3;UBERON:0002308,5.38e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,1.267098499365,0.70219357896598,1.71217968225505,1.59544317990673,1.02720437958723,0.699363219351979,0,0.607425802169478,0,0.315462165358238,0.137114433605739,0.84877930359606,1.78590909317247,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0,0.405017814995072,0,5.14171771926846,6.62605622854841,0.122490799214954,0.383381884072945,0.919218786610021,9.91042928994498,9.44886301830389,6.91229399653096,0.395658863190582,0.457438218012048,0.52091337055676,9.21303896704557,8.4414391504752,3.81995619442025,3.83017161115768,2.98980529678116,2.05039390407831,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,12.2828324311955,8.6925114535539,1.88481528169297,14.7750672163435,10.7400492078739,9.14267396062064,8.4365456795234,0,0,0,0.210441855886474,0,0,0,0.452114453507145,0.544291993210623,0.2562274405697,0.374806898238915,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7717461423095,2.46971069710283,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,6.68106613575558,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,6.10510501201433,0,0,0,0,0,0,0.604647113929502,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0,0.532020700926821,0.713475270408282,0.329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| ||
|EntrezGene=11764 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8CC13 | |||
|association_with_transcript=-129bp_to_NM_001243043,uc007hvn.1_5end | |||
|description=CAGE_peak_6_at_Ap1b1_5end | |||
|id=chr11:4847359..4847394,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.65e-10!23;CL:0000337!3.65e-10!23;CL:0000540!2.86e-08!33;CL:0000047!2.86e-08!33;CL:0000031!2.86e-08!33;CL:0000404!2.86e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-08,23;CL:0000337,1.08e-08,23;CL:0002610,2.39e-07,3;CL:0002614,5.38e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-24!52;UBERON:0005068!1.47e-24!52;UBERON:0006241!1.47e-24!52;UBERON:0007135!1.47e-24!52;UBERON:0007811!1.62e-24!86;UBERON:0000073!1.68e-23!75;UBERON:0001016!1.68e-23!75;UBERON:0002346!1.89e-23!71;UBERON:0003075!1.89e-23!71;UBERON:0007284!1.89e-23!71;UBERON:0000955!2.46e-23!50;UBERON:0006238!2.46e-23!50;UBERON:0001017!2.96e-23!73;UBERON:0005743!2.96e-23!73;UBERON:0000033!4.13e-23!63;UBERON:0002616!1.45e-22!49;UBERON:0000153!4.34e-21!94;UBERON:0004121!3.06e-20!102;UBERON:0000924!3.06e-20!102;UBERON:0006601!3.06e-20!102;UBERON:0003056!6.85e-19!49;UBERON:0003080!9.30e-19!40;UBERON:0002780!7.13e-18!39;UBERON:0001890!7.13e-18!39;UBERON:0006240!7.13e-18!39;UBERON:0002020!7.80e-18!34;UBERON:0002791!2.91e-14!29;UBERON:0003528!2.91e-14!29;UBERON:0001893!2.91e-14!29;UBERON:0002619!6.94e-10!17;UBERON:0002021!7.12e-10!10;UBERON:0000411!7.12e-10!10;UBERON:0001950!7.12e-10!10;UBERON:0000956!2.20e-09!21;UBERON:0001869!2.20e-09!21;UBERON:0000203!2.20e-09!21;UBERON:0000064!4.09e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-39,54;UBERON:0001049,5.53e-35,52;UBERON:0005068,5.53e-35,52;UBERON:0006241,5.53e-35,52;UBERON:0007135,5.53e-35,52;UBERON:0001017,2.36e-30,73;UBERON:0001016,2.56e-29,75;UBERON:0002346,7.02e-29,64;UBERON:0003075,7.02e-29,64;UBERON:0007284,7.02e-29,64;UBERON:0002020,2.33e-28,34;UBERON:0000955,2.71e-27,47;UBERON:0006238,2.71e-27,47;UBERON:0002616,8.47e-26,46;UBERON:0010371,2.50e-24,73;UBERON:0004121,7.88e-23,95;UBERON:0000924,7.88e-23,95;UBERON:0006601,7.88e-23,95;UBERON:0003080,1.77e-21,40;UBERON:0002021,3.27e-21,10;UBERON:0000411,3.27e-21,10;UBERON:0001950,3.27e-21,10;UBERON:0003528,1.14e-20,29;UBERON:0002791,1.14e-20,29;UBERON:0001893,1.14e-20,29;UBERON:0002780,7.93e-20,39;UBERON:0001890,7.93e-20,39;UBERON:0006240,7.93e-20,39;UBERON:0003056,3.82e-18,49;UBERON:0010314,1.20e-17,92;UBERON:0002619,1.01e-16,17;UBERON:0000956,1.58e-15,21;UBERON:0001869,1.58e-15,21;UBERON:0000203,1.58e-15,21;UBERON:0003076,1.71e-14,12;UBERON:0003057,1.71e-14,12;UBERON:0000025,1.07e-11,114;UBERON:0002240,2.48e-11,6;UBERON:0005174,2.48e-11,6;UBERON:0001137,2.48e-11,6;UBERON:0004111,2.01e-10,122;UBERON:0001948,1.23e-09,5;UBERON:0002315,1.23e-09,5;UBERON:0002950,4.24e-09,4;UBERON:0001891,4.24e-09,4;UBERON:0009616,4.24e-09,4;UBERON:0010286,4.24e-09,4;UBERON:0011216,9.40e-09,194;UBERON:0000483,3.65e-08,174;UBERON:0000119,5.64e-08,176;UBERON:0004684,2.39e-07,3;UBERON:0002275,2.39e-07,3;UBERON:0002038,5.38e-07,3;UBERON:0009663,5.38e-07,3;UBERON:0009661,5.38e-07,3;UBERON:0000125,5.38e-07,3;UBERON:0002308,5.38e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,1.267098499365,0.70219357896598,1.71217968225505,1.59544317990673,1.02720437958723,0.699363219351979,0,0.607425802169478,0,0.315462165358238,0.137114433605739,0.84877930359606,1.78590909317247,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0,0.405017814995072,0,5.14171771926846,6.62605622854841,0.122490799214954,0.383381884072945,0.919218786610021,9.91042928994498,9.44886301830389,6.91229399653096,0.395658863190582,0.457438218012048,0.52091337055676,9.21303896704557,8.4414391504752,3.81995619442025,3.83017161115768,2.98980529678116,2.05039390407831,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,12.2828324311955,8.6925114535539,1.88481528169297,14.7750672163435,10.7400492078739,9.14267396062064,8.4365456795234,0,0,0,0.210441855886474,0,0,0,0.452114453507145,0.544291993210623,0.2562274405697,0.374806898238915,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7717461423095,2.46971069710283,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,6.68106613575558,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,6.10510501201433,0,0,0,0,0,0,0.604647113929502,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,6.48988557036784,0.341741761595705,0,0,0,0.136694227721025,0.457556346413045,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.524296722128554,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0.443068581523732,0.100966449948148,0.15241361331,0.504130925684203,0.194915761479505,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,9.03602948187307,8.28585425712918,6.30185064783336,8.59265911718438,12.3314853558716,11.3309084608455,8.10027000278167,12.158672487054,10.8754178156209,18.1216109113137,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,0.644613162144895,0,0.441182838239031,0 | |||
|short_description=p6@Ap1b1 | |||
}} |
Revision as of 19:46, 12 September 2013
Short description: | p6@Ap1b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ap1b1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -129bp_to_NM_001243043, uc007hvn.1_5end |
EntrezGene: | Ap1b1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-08 | 23 |
raphe nuclei neuron | 2.39e-07 | 3 |
neuron of the substantia nigra | 5.38e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.