FFCP PHASE1:Mm9::chr11:21471789..21471800,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=17449|HGNC=|MCL_coexpression_id=1250|UniProt=P14152|association_with_transcript=136bp_to_NM_008618,uc007idv.2_5end|description=CAGE_peak_2_at_Mdh1_5end|id=chr11:21471789..21471800,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.69e-08!43;UBERON:0000481!2.67e-07!230;UBERON:0003914!3.04e-07!47;UBERON:0003103!6.98e-07!43;UBERON:0007023!7.48e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.98e-09,31;UBERON:0003914,3.04e-07,47;UBERON:0003103,6.98e-07,43;UBERON:0007023,7.48e-07,51|phase1_expression=25.3035178425574,132.959630310597,105.104824298983,109.492044493072,114.705122157714,44.8237656004746,57.2350969459038,21.1762250444185,7.88416844049334,9.36258105287974,5.30775701499065,6.06268408364557,13.8672591244277,19.4073293370174,2.99798785634096,6.47920855647443,3.49780939064073,18.2968055907778,16.7279608999001,17.3999757237192,66.5888961882876,24.1277011418151,26.9035782813103,117.914415598741,108.969408506906,186.625388337382,144.736030709449,123.034073863643,257.481733363387,209.437037830502,103.548148476027,1.27006134691926,2.46025915033828,0,62.103098246524,77.2991100916989,68.8050730604184,9.62622750694888,10.1573594788094,13.088093599345,7.05877785637217,9.56263678941824,9.22469670759192,18.6327290603854,18.6533553443907,14.3166466686112,2.34717403304412,11.5553332881637,14.2796018777407,25.0814569805826,8.39918529752175,7.18762821824858,15.268217151254,15.9579671242496,11.4271891708438,7.20326420900652,2.29226751951005,36.6127185516984,18.613114399083,23.2756030879694,24.0855933332348,4.40497891689872,13.3394219416671,2.2497492932035,2.96659908770092,2.8419204597844,3.29560121570245,2.30530983192933,6.53244557543409,5.94026128659439,5.04779907243317,44.5615535669934,51.2415015007743,9.30930074033651,9.10531974673246,11.0306254393203,105.711245759413,140.839133907962,142.239649795281,17.2771036926554,22.780423257,14.5855743755893,158.017577434782,135.063026407603,118.571440274805,31.2306300602088,41.1454157509407,25.1639251864156,4.61929779332423,6.95258352982427,9.27566363845369,220.268512507235,76.8367607089758,157.593331958243,197.532030904091,177.866674177642,151.118196061765,6.47635225796619,4.93593408745451,5.65343319216544,30.9855523508697,1.28326477414318,0,0,16.0203370348298,11.9079136773296,13.6491600153991,145.013527243206,12.6879562987114,27.4617957269926,14.052311468057,19.1813251336649,17.9880087859726,22.6083960828934,17.4031286560843,49.1356372099031,23.7307169024999,96.8815691363408,31.8459798701955,29.4415666904285,36.2180090275045,29.0925151881133,150.977326586679,91.0548278705912,90.2715306365991,185.461822081437,11.1428065790506,14.9975682748352,9.27612657633372,142.900269992201,123.982663363848,18.9738071690425,110.72609196248,103.564760218784,159.165642132623,130.92869929568,6.00852246716866,31.1017426525233,65.9606399511891,101.222532681394,13.7927669540466,16.5529515192101,11.1638520479317,16.4268251440929,6.87168641428411,11.4021211053516,12.2749259173245,65.451952796971,11.6406716183735,12.6701073712439,14.9558455539357,10.5213951565236,12.7901734643775,14.9748431604532,17.2856994582672,10.5488161413801,9.12877143507205,6.69104558498259,9.37739548005456,73.5296492501032,89.3544288527977,117.04033994966,92.330446878232,133.40614912474,145.93668879146,190.910368640085,183.23073315594,183.905414228292,199.940217644879,291.889751132631,312.60132960882,392.400766249592,411.217365940138,401.948224187313,75.0735116373934,7.40913209130848,359.495635886372,117.680502165277,15.1434657880016,12.3085436086032,25.0002874964861,54.8579186975492,71.6057301180482,91.498526160141,123.852085063118,97.1723832871664,82.1866132776881,66.8493746058267,63.5582924008332,97.0724961346559,146.973873914792,163.494985341835,18.587454293402,24.1064361606528,45.0830942692322,53.9676018790083,68.0773229958366,56.1787917321452,83.3457559297711,192.483632965401,247.115997622324,252.840788875769,147.040503035226,12.346537822991,9.82794975566015,12.8171404059367,11.1573066763677,29.9059678092997,40.4855104332458,47.4698626793838,55.7745180106122,77.7008799322271,50.3188722845741,66.6132296326621,79.569606644213,129.825543264815,169.351158364685,214.687367006698,16.2582807346612,22.7389694124582,13.5260930446881,13.2401166904647,10.3263709246941,13.4005005953453,12.8543566078447,8.00047956216975,12.6108115284953,7.9727288273559,7.01600982092943,15.0754249538479,18.6499780415167,15.3328002096402,7.53956419696361,3.80733978673097,94.910504692674,52.7039185442039,175.642345446644,161.283280750872,9.01642199571715,133.304649563909,12.9358369960665,9.37052986311932,10.7711698866399,4.30143836314594,6.90675889655422,4.52922449262132,7.2865926301481,10.8134667427185,9.48690667071656,73.9039027770156,14.0520684356186,9.43747699436453,6.51547837414304,14.1874305756381,37.1686387351896,20.1507928008635,23.8835610002153,40.5500921475181,24.8053590019849,23.3650712437385,28.9439688348408,19.6308213917853,24.5983191085458,37.6083741943621,50.6009321159994,45.3796390292022,43.2358299307311,17.4659261210371,21.60290019172,19.5046701878749,31.0345408873979,24.6148968290857,25.0114511315224,20.3991515906782,12.6722722354404,16.3110694565142,65.4969342223237,19.4565778470946,13.5630118424561,17.6113740790215,17.6671069124642,20.8458942676228,101.726811983818,122.009848722915,7.34744787430767,8.87463532241857,5.00025223898222,5.65105371014073,5.33107488111998,8.00723606222829,12.7483822495391,12.7355821614529,10.9177979305495,115.515144779829,9.33191181064349,16.6721963044016,31.2135434975006,31.3632444021703,50.2233896616208,45.4492847316846,44.8808264588574,124.857584326382,102.784673820392,89.4728610845173,1.69107881605257,10.6156747691225,13.567596217482,7.97249872210595,13.1743019947286,6.25137664315879,5.8678619322877,7.94246747548096,6.71099804324549,4.83168241652012,15.5536203379247,18.9606672376907,23.516124973659,23.4180982335806,24.9447980117366,19.5139098277555,21.8549490259391,13.4618903462365,19.0519490055205,17.9720280907703,15.85101578424,12.7040993272419,12.9618981383871,15.6825301873737,14.4927358705145,140.799568225046,6.21560669447381,7.98453323824334,11.4161539127573,18.9325802151547,19.1436124960206,17.3994043053902,17.5782070844834,64.2012293165265,84.1480245499429,92.9856977744497,76.1951032874397,74.7561343195041,95.9115527678899,95.935024968492,137.029567547057,124.288652089885,139.567861967135,113.389508273649,13.2847804907746,11.1726964552289,13.8294220660849,9.96737539980005,17.1882793354945,33.2756750294526,59.3398763230313,52.1268694814402,60.6537306128531,46.2435897527749,55.7654459758527,51.872243881171,48.5063008693991,47.3786127796033,41.9853278065533,44.7716069806089,42.9930849255414,42.8258469429425,48.2140503939869,55.4939928906678,59.3163806626769,56.25983055251,54.6018874979365,59.5920308192547,50.6308466634479,48.9918579692807,50.8539764586308,57.0861273820119,49.161089212202,46.0136662759345,48.5217224127872,46.0015932693881,35.1938697125933,48.8051049735793,34.3373767546432,22.4829520144151,55.9096544184526,37.8173055125005,41.1269913948013,50.9566178166081,73.2702360560532|short_description=p2@Mdh1}} | ||
|EntrezGene=17449 | |||
|HGNC= | |||
|MCL_coexpression_id=1250 | |||
|UniProt=P14152 | |||
|association_with_transcript=136bp_to_NM_008618,uc007idv.2_5end | |||
|description=CAGE_peak_2_at_Mdh1_5end | |||
|id=chr11:21471789..21471800,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.69e-08!43;UBERON:0000481!2.67e-07!230;UBERON:0003914!3.04e-07!47;UBERON:0003103!6.98e-07!43;UBERON:0007023!7.48e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.98e-09,31;UBERON:0003914,3.04e-07,47;UBERON:0003103,6.98e-07,43;UBERON:0007023,7.48e-07,51 | |||
|phase1_expression=25.3035178425574,132.959630310597,105.104824298983,109.492044493072,114.705122157714,44.8237656004746,57.2350969459038,21.1762250444185,7.88416844049334,9.36258105287974,5.30775701499065,6.06268408364557,13.8672591244277,19.4073293370174,2.99798785634096,6.47920855647443,3.49780939064073,18.2968055907778,16.7279608999001,17.3999757237192,66.5888961882876,24.1277011418151,26.9035782813103,117.914415598741,108.969408506906,186.625388337382,144.736030709449,123.034073863643,257.481733363387,209.437037830502,103.548148476027,1.27006134691926,2.46025915033828,0,62.103098246524,77.2991100916989,68.8050730604184,9.62622750694888,10.1573594788094,13.088093599345,7.05877785637217,9.56263678941824,9.22469670759192,18.6327290603854,18.6533553443907,14.3166466686112,2.34717403304412,11.5553332881637,14.2796018777407,25.0814569805826,8.39918529752175,7.18762821824858,15.268217151254,15.9579671242496,11.4271891708438,7.20326420900652,2.29226751951005,36.6127185516984,18.613114399083,23.2756030879694,24.0855933332348,4.40497891689872,13.3394219416671,2.2497492932035,2.96659908770092,2.8419204597844,3.29560121570245,2.30530983192933,6.53244557543409,5.94026128659439,5.04779907243317,44.5615535669934,51.2415015007743,9.30930074033651,9.10531974673246,11.0306254393203,105.711245759413,140.839133907962,142.239649795281,17.2771036926554,22.780423257,14.5855743755893,158.017577434782,135.063026407603,118.571440274805,31.2306300602088,41.1454157509407,25.1639251864156,4.61929779332423,6.95258352982427,9.27566363845369,220.268512507235,76.8367607089758,157.593331958243,197.532030904091,177.866674177642,151.118196061765,6.47635225796619,4.93593408745451,5.65343319216544,30.9855523508697,1.28326477414318,0,0,16.0203370348298,11.9079136773296,13.6491600153991,145.013527243206,12.6879562987114,27.4617957269926,14.052311468057,19.1813251336649,17.9880087859726,22.6083960828934,17.4031286560843,49.1356372099031,23.7307169024999,96.8815691363408,31.8459798701955,29.4415666904285,36.2180090275045,29.0925151881133,150.977326586679,91.0548278705912,90.2715306365991,185.461822081437,11.1428065790506,14.9975682748352,9.27612657633372,142.900269992201,123.982663363848,18.9738071690425,110.72609196248,103.564760218784,159.165642132623,130.92869929568,6.00852246716866,31.1017426525233,65.9606399511891,101.222532681394,13.7927669540466,16.5529515192101,11.1638520479317,16.4268251440929,6.87168641428411,11.4021211053516,12.2749259173245,65.451952796971,11.6406716183735,12.6701073712439,14.9558455539357,10.5213951565236,12.7901734643775,14.9748431604532,17.2856994582672,10.5488161413801,9.12877143507205,6.69104558498259,9.37739548005456,73.5296492501032,89.3544288527977,117.04033994966,92.330446878232,133.40614912474,145.93668879146,190.910368640085,183.23073315594,183.905414228292,199.940217644879,291.889751132631,312.60132960882,392.400766249592,411.217365940138,401.948224187313,75.0735116373934,7.40913209130848,359.495635886372,117.680502165277,15.1434657880016,12.3085436086032,25.0002874964861,54.8579186975492,71.6057301180482,91.498526160141,123.852085063118,97.1723832871664,82.1866132776881,66.8493746058267,63.5582924008332,97.0724961346559,146.973873914792,163.494985341835,18.587454293402,24.1064361606528,45.0830942692322,53.9676018790083,68.0773229958366,56.1787917321452,83.3457559297711,192.483632965401,247.115997622324,252.840788875769,147.040503035226,12.346537822991,9.82794975566015,12.8171404059367,11.1573066763677,29.9059678092997,40.4855104332458,47.4698626793838,55.7745180106122,77.7008799322271,50.3188722845741,66.6132296326621,79.569606644213,129.825543264815,169.351158364685,214.687367006698,16.2582807346612,22.7389694124582,13.5260930446881,13.2401166904647,10.3263709246941,13.4005005953453,12.8543566078447,8.00047956216975,12.6108115284953,7.9727288273559,7.01600982092943,15.0754249538479,18.6499780415167,15.3328002096402,7.53956419696361,3.80733978673097,94.910504692674,52.7039185442039,175.642345446644,161.283280750872,9.01642199571715,133.304649563909,12.9358369960665,9.37052986311932,10.7711698866399,4.30143836314594,6.90675889655422,4.52922449262132,7.2865926301481,10.8134667427185,9.48690667071656,73.9039027770156,14.0520684356186,9.43747699436453,6.51547837414304,14.1874305756381,37.1686387351896,20.1507928008635,23.8835610002153,40.5500921475181,24.8053590019849,23.3650712437385,28.9439688348408,19.6308213917853,24.5983191085458,37.6083741943621,50.6009321159994,45.3796390292022,43.2358299307311,17.4659261210371,21.60290019172,19.5046701878749,31.0345408873979,24.6148968290857,25.0114511315224,20.3991515906782,12.6722722354404,16.3110694565142,65.4969342223237,19.4565778470946,13.5630118424561,17.6113740790215,17.6671069124642,20.8458942676228,101.726811983818,122.009848722915,7.34744787430767,8.87463532241857,5.00025223898222,5.65105371014073,5.33107488111998,8.00723606222829,12.7483822495391,12.7355821614529,10.9177979305495,115.515144779829,9.33191181064349,16.6721963044016,31.2135434975006,31.3632444021703,50.2233896616208,45.4492847316846,44.8808264588574,124.857584326382,102.784673820392,89.4728610845173,1.69107881605257,10.6156747691225,13.567596217482,7.97249872210595,13.1743019947286,6.25137664315879,5.8678619322877,7.94246747548096,6.71099804324549,4.83168241652012,15.5536203379247,18.9606672376907,23.516124973659,23.4180982335806,24.9447980117366,19.5139098277555,21.8549490259391,13.4618903462365,19.0519490055205,17.9720280907703,15.85101578424,12.7040993272419,12.9618981383871,15.6825301873737,14.4927358705145,140.799568225046,6.21560669447381,7.98453323824334,11.4161539127573,18.9325802151547,19.1436124960206,17.3994043053902,17.5782070844834,64.2012293165265,84.1480245499429,92.9856977744497,76.1951032874397,74.7561343195041,95.9115527678899,95.935024968492,137.029567547057,124.288652089885,139.567861967135,113.389508273649,13.2847804907746,11.1726964552289,13.8294220660849,9.96737539980005,17.1882793354945,33.2756750294526,59.3398763230313,52.1268694814402,60.6537306128531,46.2435897527749,55.7654459758527,51.872243881171,48.5063008693991,47.3786127796033,41.9853278065533,44.7716069806089,42.9930849255414,42.8258469429425,48.2140503939869,55.4939928906678,59.3163806626769,56.25983055251,54.6018874979365,59.5920308192547,50.6308466634479,48.9918579692807,50.8539764586308,57.0861273820119,49.161089212202,46.0136662759345,48.5217224127872,46.0015932693881,35.1938697125933,48.8051049735793,34.3373767546432,22.4829520144151,55.9096544184526,37.8173055125005,41.1269913948013,50.9566178166081,73.2702360560532 | |||
|short_description=p2@Mdh1 | |||
}} | |||
Revision as of 19:14, 12 September 2013
| Short description: | p2@Mdh1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Mdh1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1250 |
| Association with transcript: | 136bp_to_NM_008618, uc007idv.2_5end |
| EntrezGene: | Mdh1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 5.98e-09 | 31 |
| epithelial tube | 3.04e-07 | 47 |
| compound organ | 6.98e-07 | 43 |
| adult organism | 7.48e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
