FFCP PHASE1:Hg19::chr2:47601125..47601140,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4072|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11529|TSSclassifier=N|UniProt=|association_with_transcript=211bp_to_ENST00000490733_5end|coexpression_cluster_id=C1908|description=CAGE_peak_8_at_EPCAM_5end|id=chr2:47601125..47601140,+|ontology_enrichment_celltype=CL:0000066!9.45e-17!254;CL:0000039!8.77e-11!7;CL:0000586!8.77e-11!7;CL:0000223!1.62e-10!59;CL:0002322!5.85e-09!5;CL:0002076!6.24e-09!43;CL:0002251!3.40e-07!21|ontology_enrichment_celltype_v019=CL:0000313;1.23e-07;1!CL:0002553;4.33e-07;1|ontology_enrichment_celltype_v019_2=CL:0000313,1.27e-07,1;CL:0002553,3.21e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.70e-34!106;DOID:0050687!4.15e-25!143;DOID:162!2.88e-13!235;DOID:14566!1.27e-12!239;DOID:1749!3.29e-11!14;DOID:299!1.56e-10!25;DOID:3119!3.79e-08!14|ontology_enrichment_disease_v019=DOID:299;4.30e-08;25!DOID:2152;1.23e-07;1!DOID:120;1.62e-07;27!DOID:178;4.33e-07;1!DOID:326;4.33e-07;1!DOID:3978;4.33e-07;1!DOID:3394;4.33e-07;1!DOID:5844;4.33e-07;1!DOID:193;5.88e-07;29|ontology_enrichment_disease_v019_2=DOID:305,1.61e-09,106;DOID:299,3.93e-08,25;DOID:2152,1.27e-07,1;DOID:120,1.72e-07,27;DOID:0050687,2.42e-07,143;DOID:193,6.19e-07,29;DOID:178,6.20e-07,1;DOID:326,6.20e-07,1;DOID:3978,6.20e-07,1;DOID:3394,6.20e-07,1;DOID:5844,6.20e-07,1|ontology_enrichment_uberon=UBERON:0001007!1.93e-16!155;UBERON:0001555!1.93e-16!155;UBERON:0007026!1.93e-16!155;UBERON:0004119!1.57e-14!169;UBERON:0000925!1.57e-14!169;UBERON:0006595!1.57e-14!169;UBERON:0004921!5.50e-14!129;UBERON:0004185!5.50e-14!129;UBERON:0005911!1.63e-11!82;UBERON:0005409!8.91e-11!35;UBERON:0000160!2.81e-10!27;UBERON:0005153!4.00e-09!37;UBERON:0000466!9.59e-09!126;UBERON:0000077!1.03e-08!130;UBERON:0000464!5.18e-08!104;UBERON:0002048!8.50e-08!22;UBERON:0000117!8.50e-08!22;UBERON:0000171!8.50e-08!22;UBERON:0000170!8.50e-08!22;UBERON:0005597!8.50e-08!22;UBERON:0000118!8.50e-08!22;UBERON:0002294!1.33e-07!7;UBERON:0001173!1.33e-07!7;UBERON:0004912!1.33e-07!7;UBERON:0000344!5.91e-07!12|ontology_enrichment_uberon_v019=UBERON:0005409;8.03e-12;22!UBERON:0002108;1.66e-11;4!UBERON:0000160;1.89e-11;17!UBERON:0004921;2.63e-08;33!UBERON:0004911;1.23e-07;1!UBERON:0002171;4.33e-07;1!UBERON:0006518;4.33e-07;1!UBERON:0008949;4.33e-07;1!UBERON:0000101;4.33e-07;1!UBERON:0002167;4.33e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-11,17;UBERON:0002108,1.39e-11,4;UBERON:0005409,1.55e-10,25;UBERON:0004911,1.27e-07,1;UBERON:0002171,5.50e-07,1;UBERON:0006518,5.50e-07,1;UBERON:0008949,5.50e-07,1;UBERON:0000101,5.50e-07,1;UBERON:0002167,5.50e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.487894824518382,0.927708378250397,0.69716365721711,1.24393266018445,1.51392510525377,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14234568938218,0.200506470303285,0.920809889358963,0,0,0,0,0.462092022626489,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.422250816255987,0.19924798825107,0,1.25966373927138,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.682760689712998,1.01701460117107,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.179515288819544,2.93347904189422,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,2.44849212238722,0.141353071433941,0,1.99052386215701,0.619202951523374,3.05515072466813,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,3.62972148145992,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,5.72747136505932,0.0979923974143777,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0.0801588202515337,0.640358984218058,0,1.87317542300338,0.114536596165916,0.514784993585894,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0.551482276150566,0.906574442192831,0.26961417541674,0,0,0,0,0.321506296930038,0.687697182986169,4.56984371832104,0,0.77380195455795,0,0,0.157611414598396,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0.353909170043221,0,0.577628330751691,0,0,0,0,0,1.56302802246618,0.785720083444267,0,0.887136517302272,0.0675375846183947,0,0,0,0,0,0,0,3.32182311862948,0,0,1.21393120847326,0,0,0,0,0,0,0,0.556157009460346,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,4.3623618401139,0.98150233615243,0.975343399858155,0,0,0,0.485710993059139,2.10545517115895,2.58636007709779,0.118920090777569,0.45178432815584,0,1.66059127923341,1.54348316215889,7.86814417814246,7.05475944542284,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.320965466756673,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0.218531143927391,0,0.509944148709909,0.26721740526556,0.551369397209069,2.25636785363138,0,0,0,0,0,0.476128862927481,0,0,0,0.381882949668989,1.0105859447911,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0.718601616852695,0,0,0,0,0,0|short_description=p8@EPCAM}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4072 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=211bp_to_ENST00000490733_5end | |||
|coexpression_cluster_id=C1908 | |||
|description=CAGE_peak_8_at_EPCAM_5end | |||
|id=chr2:47601125..47601140,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.45e-17!254;CL:0000039!8.77e-11!7;CL:0000586!8.77e-11!7;CL:0000223!1.62e-10!59;CL:0002322!5.85e-09!5;CL:0002076!6.24e-09!43;CL:0002251!3.40e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.23e-07;1!CL:0002553;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.27e-07,1;CL:0002553,3.21e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.70e-34!106;DOID:0050687!4.15e-25!143;DOID:162!2.88e-13!235;DOID:14566!1.27e-12!239;DOID:1749!3.29e-11!14;DOID:299!1.56e-10!25;DOID:3119!3.79e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.30e-08;25!DOID:2152;1.23e-07;1!DOID:120;1.62e-07;27!DOID:178;4.33e-07;1!DOID:326;4.33e-07;1!DOID:3978;4.33e-07;1!DOID:3394;4.33e-07;1!DOID:5844;4.33e-07;1!DOID:193;5.88e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.61e-09,106;DOID:299,3.93e-08,25;DOID:2152,1.27e-07,1;DOID:120,1.72e-07,27;DOID:0050687,2.42e-07,143;DOID:193,6.19e-07,29;DOID:178,6.20e-07,1;DOID:326,6.20e-07,1;DOID:3978,6.20e-07,1;DOID:3394,6.20e-07,1;DOID:5844,6.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.93e-16!155;UBERON:0001555!1.93e-16!155;UBERON:0007026!1.93e-16!155;UBERON:0004119!1.57e-14!169;UBERON:0000925!1.57e-14!169;UBERON:0006595!1.57e-14!169;UBERON:0004921!5.50e-14!129;UBERON:0004185!5.50e-14!129;UBERON:0005911!1.63e-11!82;UBERON:0005409!8.91e-11!35;UBERON:0000160!2.81e-10!27;UBERON:0005153!4.00e-09!37;UBERON:0000466!9.59e-09!126;UBERON:0000077!1.03e-08!130;UBERON:0000464!5.18e-08!104;UBERON:0002048!8.50e-08!22;UBERON:0000117!8.50e-08!22;UBERON:0000171!8.50e-08!22;UBERON:0000170!8.50e-08!22;UBERON:0005597!8.50e-08!22;UBERON:0000118!8.50e-08!22;UBERON:0002294!1.33e-07!7;UBERON:0001173!1.33e-07!7;UBERON:0004912!1.33e-07!7;UBERON:0000344!5.91e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.03e-12;22!UBERON:0002108;1.66e-11;4!UBERON:0000160;1.89e-11;17!UBERON:0004921;2.63e-08;33!UBERON:0004911;1.23e-07;1!UBERON:0002171;4.33e-07;1!UBERON:0006518;4.33e-07;1!UBERON:0008949;4.33e-07;1!UBERON:0000101;4.33e-07;1!UBERON:0002167;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-11,17;UBERON:0002108,1.39e-11,4;UBERON:0005409,1.55e-10,25;UBERON:0004911,1.27e-07,1;UBERON:0002171,5.50e-07,1;UBERON:0006518,5.50e-07,1;UBERON:0008949,5.50e-07,1;UBERON:0000101,5.50e-07,1;UBERON:0002167,5.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.487894824518382,0.927708378250397,0.69716365721711,1.24393266018445,1.51392510525377,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14234568938218,0.200506470303285,0.920809889358963,0,0,0,0,0.462092022626489,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.422250816255987,0.19924798825107,0,1.25966373927138,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.682760689712998,1.01701460117107,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.179515288819544,2.93347904189422,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,2.44849212238722,0.141353071433941,0,1.99052386215701,0.619202951523374,3.05515072466813,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,3.62972148145992,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,5.72747136505932,0.0979923974143777,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0.0801588202515337,0.640358984218058,0,1.87317542300338,0.114536596165916,0.514784993585894,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0.551482276150566,0.906574442192831,0.26961417541674,0,0,0,0,0.321506296930038,0.687697182986169,4.56984371832104,0,0.77380195455795,0,0,0.157611414598396,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0.353909170043221,0,0.577628330751691,0,0,0,0,0,1.56302802246618,0.785720083444267,0,0.887136517302272,0.0675375846183947,0,0,0,0,0,0,0,3.32182311862948,0,0,1.21393120847326,0,0,0,0,0,0,0,0.556157009460346,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,4.3623618401139,0.98150233615243,0.975343399858155,0,0,0,0.485710993059139,2.10545517115895,2.58636007709779,0.118920090777569,0.45178432815584,0,1.66059127923341,1.54348316215889,7.86814417814246,7.05475944542284,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.320965466756673,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0.218531143927391,0,0.509944148709909,0.26721740526556,0.551369397209069,2.25636785363138,0,0,0,0,0,0.476128862927481,0,0,0,0.381882949668989,1.0105859447911,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0.718601616852695,0,0,0,0,0,0 | |||
|short_description=p8@EPCAM | |||
}} |
Revision as of 18:51, 12 September 2013
Short description: | p8@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_EPCAM_5end |
Coexpression cluster: | C1908_smallcell_endometrioid_small_colon_temporal_iPS_duodenum |
Association with transcript: | 211bp_to_ENST00000490733_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.27e-07 | 1 |
lung fibroblast | 3.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.31e-11 | 17 |
small intestine | 1.39e-11 | 4 |
gastrointestinal system | 1.55e-10 | 25 |
epithelium of female gonad | 1.27e-07 | 1 |
lower lobe of right lung | 5.50e-07 | 1 |
right lung lobe | 5.50e-07 | 1 |
lower lobe of lung | 5.50e-07 | 1 |
lobe of lung | 5.50e-07 | 1 |
right lung | 5.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.61e-09 | 106 |
adenocarcinoma | 3.93e-08 | 25 |
ovary epithelial cancer | 1.27e-07 | 1 |
female reproductive organ cancer | 1.72e-07 | 27 |
cell type cancer | 2.42e-07 | 143 |
reproductive organ cancer | 6.19e-07 | 29 |
vascular disease | 6.20e-07 | 1 |
ischemia | 6.20e-07 | 1 |
extrinsic cardiomyopathy | 6.20e-07 | 1 |
myocardial ischemia | 6.20e-07 | 1 |
myocardial infarction | 6.20e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.