FFCP PHASE1:Hg19::chr2:43452821..43452851,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C767|description=CAGE_peak_at_chr2:43452821..43452851,+|id=chr2:43452821..43452851,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000624;5.16e-11;6!CL:0000094;5.71e-10;8!CL:0000791;3.86e-07;18!CL:0000789;3.86e-07;18!CL:0002419;3.86e-07;18!CL:0000623;4.89e-07;3!CL:0000081;6.36e-07;11!CL:0000226;7.47e-07;3!CL:0000842;7.47e-07;3|ontology_enrichment_celltype_v019_2=CL:0000624,1.91e-11,6;CL:0000094,3.84e-10,8;CL:0000037,1.18e-08,168;CL:0000988,1.11e-07,177;CL:0000738,1.30e-07,136;CL:0002032,1.83e-07,161;CL:0000837,1.83e-07,161;CL:0000791,2.62e-07,18;CL:0000789,2.62e-07,18;CL:0002420,2.62e-07,18;CL:0002419,2.62e-07,18;CL:0000790,2.62e-07,18;CL:0000081,4.83e-07,11;CL:0000623,5.93e-07,3;CL:0000825,5.93e-07,3;CL:0000226,7.04e-07,3;CL:0000842,7.04e-07,3|ontology_enrichment_development_v019=CL:0000790;3.86e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004905;1.50e-10;8!UBERON:0000982;1.50e-10;8!UBERON:0004770;1.50e-10;8!UBERON:0000178;3.71e-09;15!UBERON:0000179;3.71e-09;15!UBERON:0000463;3.71e-09;15!UBERON:0011135;5.25e-09;5!UBERON:0002216;5.25e-09;5!UBERON:0011134;5.25e-09;5!UBERON:0002209;5.25e-09;5!UBERON:0002213;5.25e-09;5!UBERON:0007844;5.25e-09;5!UBERON:0011138;5.25e-09;5!UBERON:0001130;5.25e-09;5!UBERON:0001066;5.25e-09;5!UBERON:0001468;5.25e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.46e-10,8;UBERON:0000982,1.46e-10,8;UBERON:0004770,1.46e-10,8;UBERON:0000178,2.68e-09,15;UBERON:0000179,2.68e-09,15;UBERON:0000463,2.68e-09,15;UBERON:0011135,5.87e-09,5;UBERON:0002216,5.87e-09,5;UBERON:0011134,5.87e-09,5;UBERON:0002209,5.87e-09,5;UBERON:0002213,5.87e-09,5;UBERON:0005856,5.87e-09,5;UBERON:0005866,5.87e-09,5;UBERON:0005863,5.87e-09,5;UBERON:0007844,5.87e-09,5;UBERON:0011138,5.87e-09,5;UBERON:0001130,5.87e-09,5;UBERON:0001066,5.87e-09,5;UBERON:0001468,5.87e-09,5|phase1_expression=1.63510541343501,0.642301571672949,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0.522371256399677,0,0.697801167972428,1.31064823278103,1.05506791291381,1.36142988256051,4.63956326019082,0,0,0,0,0,0.408001382488506,1.25381888591235,0.286235987131057,0.136874425072884,0,0.458480434487708,0.164201178899891,0.236132343941038,1.57345710739562,1.15148819429164,1.85779347979291,0.919421224478927,0.6024118375565,0.739508020333575,0.154934401160603,0,0.587200878669695,0.553995408531877,1.80490002723128,2.17010870715852,0.671746422719773,0.647787332037959,0.257575567634187,1.45398238779565,0.755751887377619,2.42584061187816,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0,0.639337125799041,0.659702600373432,0.598390972864896,0.426224750532694,0,0.56738522469114,0,1.25624332628372,0,0,0.605399502633369,0,0,0.633765858935825,0.850417199860174,0.628975936525128,1.79725809834392,2.55300717830561,0,0,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.70763890732835,2.93618594685469,4.58727873750275,2.64342657158052,0,1.31692042387539,4.13090517239049,7.46720449223413,10.2800749499755,0.167186495390678,1.62961133316795,0.946895611469467,5.84480185223734,0.557052284425868,1.47302953737419,0.886135578334485,0.541607727530031,0.768547918354051,0.520237390239513,1.47994114143309,0.552700035571697,0.289803085735052,2.96573126324121,3.47803076516627,6.27213142829861,0.566546713487831,1.91610246800961,0.68725489096526,1.26509846009751,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,2.21767417547206,12.5696892018248,7.09639579025715,0,0.670700859703636,0.511450247374121,2.1686349143074,0,0.724232594804119,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.589405839739707,0,0.741568885568859,0,0.348259474598534,0.531831842075461,4.5313218618015,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0.436094052142534,1.98788780678127,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,1.15235184896,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0.647491777472526,1.12360645361799,1.02077085627447,0.737005903870608,0.206651562351531,0,0.989067717114227,0.910161361938026,0,0.505008341862199,1.00094815897571,0,0.438977620880838,0.612975591598039,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0.460249493211497,0.161646056818812,0,0,0.339121184620975,0.386521706326594,0,0.286804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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C767 | |||
|description=CAGE_peak_at_chr2:43452821..43452851,+ | |||
|id=chr2:43452821..43452851,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.16e-11;6!CL:0000094;5.71e-10;8!CL:0000791;3.86e-07;18!CL:0000789;3.86e-07;18!CL:0002419;3.86e-07;18!CL:0000623;4.89e-07;3!CL:0000081;6.36e-07;11!CL:0000226;7.47e-07;3!CL:0000842;7.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.91e-11,6;CL:0000094,3.84e-10,8;CL:0000037,1.18e-08,168;CL:0000988,1.11e-07,177;CL:0000738,1.30e-07,136;CL:0002032,1.83e-07,161;CL:0000837,1.83e-07,161;CL:0000791,2.62e-07,18;CL:0000789,2.62e-07,18;CL:0002420,2.62e-07,18;CL:0002419,2.62e-07,18;CL:0000790,2.62e-07,18;CL:0000081,4.83e-07,11;CL:0000623,5.93e-07,3;CL:0000825,5.93e-07,3;CL:0000226,7.04e-07,3;CL:0000842,7.04e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.86e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.50e-10;8!UBERON:0000982;1.50e-10;8!UBERON:0004770;1.50e-10;8!UBERON:0000178;3.71e-09;15!UBERON:0000179;3.71e-09;15!UBERON:0000463;3.71e-09;15!UBERON:0011135;5.25e-09;5!UBERON:0002216;5.25e-09;5!UBERON:0011134;5.25e-09;5!UBERON:0002209;5.25e-09;5!UBERON:0002213;5.25e-09;5!UBERON:0007844;5.25e-09;5!UBERON:0011138;5.25e-09;5!UBERON:0001130;5.25e-09;5!UBERON:0001066;5.25e-09;5!UBERON:0001468;5.25e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.46e-10,8;UBERON:0000982,1.46e-10,8;UBERON:0004770,1.46e-10,8;UBERON:0000178,2.68e-09,15;UBERON:0000179,2.68e-09,15;UBERON:0000463,2.68e-09,15;UBERON:0011135,5.87e-09,5;UBERON:0002216,5.87e-09,5;UBERON:0011134,5.87e-09,5;UBERON:0002209,5.87e-09,5;UBERON:0002213,5.87e-09,5;UBERON:0005856,5.87e-09,5;UBERON:0005866,5.87e-09,5;UBERON:0005863,5.87e-09,5;UBERON:0007844,5.87e-09,5;UBERON:0011138,5.87e-09,5;UBERON:0001130,5.87e-09,5;UBERON:0001066,5.87e-09,5;UBERON:0001468,5.87e-09,5 | |||
|phase1_expression=1.63510541343501,0.642301571672949,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0.522371256399677,0,0.697801167972428,1.31064823278103,1.05506791291381,1.36142988256051,4.63956326019082,0,0,0,0,0,0.408001382488506,1.25381888591235,0.286235987131057,0.136874425072884,0,0.458480434487708,0.164201178899891,0.236132343941038,1.57345710739562,1.15148819429164,1.85779347979291,0.919421224478927,0.6024118375565,0.739508020333575,0.154934401160603,0,0.587200878669695,0.553995408531877,1.80490002723128,2.17010870715852,0.671746422719773,0.647787332037959,0.257575567634187,1.45398238779565,0.755751887377619,2.42584061187816,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0,0.639337125799041,0.659702600373432,0.598390972864896,0.426224750532694,0,0.56738522469114,0,1.25624332628372,0,0,0.605399502633369,0,0,0.633765858935825,0.850417199860174,0.628975936525128,1.79725809834392,2.55300717830561,0,0,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.70763890732835,2.93618594685469,4.58727873750275,2.64342657158052,0,1.31692042387539,4.13090517239049,7.46720449223413,10.2800749499755,0.167186495390678,1.62961133316795,0.946895611469467,5.84480185223734,0.557052284425868,1.47302953737419,0.886135578334485,0.541607727530031,0.768547918354051,0.520237390239513,1.47994114143309,0.552700035571697,0.289803085735052,2.96573126324121,3.47803076516627,6.27213142829861,0.566546713487831,1.91610246800961,0.68725489096526,1.26509846009751,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,2.21767417547206,12.5696892018248,7.09639579025715,0,0.670700859703636,0.511450247374121,2.1686349143074,0,0.724232594804119,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.589405839739707,0,0.741568885568859,0,0.348259474598534,0.531831842075461,4.5313218618015,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0.436094052142534,1.98788780678127,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,1.15235184896,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0.647491777472526,1.12360645361799,1.02077085627447,0.737005903870608,0.206651562351531,0,0.989067717114227,0.910161361938026,0,0.505008341862199,1.00094815897571,0,0.438977620880838,0.612975591598039,0.45071417671979,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0.460249493211497,0.161646056818812,0,0,0.339121184620975,0.386521706326594,0,0.286804595389004,0.243947412259191,0,0.580969714347592,0.10366105501537,0.504641701751257,0.36497735907583,0,1.92972281457866,0,3.71494342425583,1.44375896333917,0.118306800039844,0,0.241011029883482,0,0.435758888184812,0.474541238222193,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0.882926198829301,0.614942192715568,0,1.42675371031213,1.1240175325762,0.603173834469785,0.925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0.234004265139238,0.594524649154913,0,0,0.567100388969546,1.16426079513703,0.290633938513962,3.83382679165211,0,0.088048434013226,0.621984346622316,2.16179930125442,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.224262168690721,0.43596006883328,0.36669142910475,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.434343920002738,0.821905290201534,0,0.448340575974109,2.1673383622212,10.1344960183973,5.90377966886842,0.254094624222463,0,0,0,0,1.49801404789436,5.9832291840805,0.414415513436035,1.47229790062968,3.00102312635806,1.35632511849868,1.24782516918484,0.535286966391485,0.946214490203608,1.28855556491985,0.300946099727719,2.27407504055985,2.0694614258501,0.664225598535437,0.368738337083406,0.173767228936166,0.195801157462741,0.686286847621712,3.92859249633486,4.96142661882819,2.34800627167578,0.303127571446259,0,0.907170879989041,0,0.153461973288062,0.280660094433074,0.384417447767103,1.02341449813341,0.64341568457443,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0.813472649219715,0.725156697549733,0.802025881213139,0.276242966807689,0,0.182091168006717,0.786746489756545,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,1.54227252690289,0,0,0,0.831076008928724,0.447749509444357,0.219259876645935,0.522870902049801,0,0,0.650756789328606,0.309123034943167,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0.386682873168488,0.308097234229289,0.614014698904518,0.275673144969061,0.429680979473094,0.290033387828457,0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| |||
|short_description=p@chr2:43452821..43452851,+ | |||
}} |
Revision as of 18:41, 12 September 2013
Short description: | p@chr2:43452821..43452851, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:43452821..43452851, + |
Coexpression cluster: | C767_CD4_CD8_Neutrophils_Natural_Mast_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.91e-11 | 6 |
granulocyte | 3.84e-10 | 8 |
hematopoietic stem cell | 1.18e-08 | 168 |
hematopoietic cell | 1.11e-07 | 177 |
leukocyte | 1.30e-07 | 136 |
hematopoietic oligopotent progenitor cell | 1.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-07 | 161 |
mature alpha-beta T cell | 2.62e-07 | 18 |
alpha-beta T cell | 2.62e-07 | 18 |
immature T cell | 2.62e-07 | 18 |
mature T cell | 2.62e-07 | 18 |
immature alpha-beta T cell | 2.62e-07 | 18 |
blood cell | 4.83e-07 | 11 |
natural killer cell | 5.93e-07 | 3 |
pro-NK cell | 5.93e-07 | 3 |
single nucleate cell | 7.04e-07 | 3 |
mononuclear cell | 7.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.46e-10 | 8 |
skeletal joint | 1.46e-10 | 8 |
articular system | 1.46e-10 | 8 |
blood | 2.68e-09 | 15 |
haemolymphatic fluid | 2.68e-09 | 15 |
organism substance | 2.68e-09 | 15 |
intervertebral cartilage | 5.87e-09 | 5 |
symphysis | 5.87e-09 | 5 |
nonsynovial joint | 5.87e-09 | 5 |
fibrous joint | 5.87e-09 | 5 |
cartilaginous joint | 5.87e-09 | 5 |
developing mesenchymal condensation | 5.87e-09 | 5 |
pre-cartilage condensation | 5.87e-09 | 5 |
cartilaginous condensation | 5.87e-09 | 5 |
cartilage element | 5.87e-09 | 5 |
post-cranial axial skeletal system | 5.87e-09 | 5 |
vertebral column | 5.87e-09 | 5 |
intervertebral disk | 5.87e-09 | 5 |
intervertebral joint | 5.87e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.