FFCP PHASE1:Mm9::chr11:107577770..107577828,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12299|HGNC=|MCL_coexpression_id=14|UniProt=O70578,Q4KL26|association_with_transcript=0bp_to_NM_007582,uc007may.1_5end|description=CAGE_peak_1_at_Cacng1_5end|id=chr11:107577770..107577828,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.50e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.25e-11,22;UBERON:0000026,9.49e-09,12;UBERON:0004708,9.49e-09,12;UBERON:0002101,9.49e-09,12;UBERON:0004357,9.49e-09,12;UBERON:0004347,9.49e-09,12;UBERON:0005732,9.49e-09,12;UBERON:0005733,9.49e-09,12;UBERON:0010707,7.84e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42371680799103,0,0.37863096666592,0.151143120213571,0,0,0,0,0,0,83.5644299783924,0,0,0,0,0,0,0,0,0,0,11.7609396110632,0.258937883647172,0,1.38788261412909,5.1759131313064,7.37969591219387,1.05505848386836,6.11461277105665,0.502666365318702,0.247194967734374,0.578397427679647,52.1920225650426,207.223334782631,130.075654373172,96.4901753739092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,27.9915683872709,0,2.10441855886474,0.650602214813519,2.06911893990126,2.88099407688559,4.9732589885786,7.0757959117381,8.07116437794554,5.34099829990454,6.98499100995342,0,3.78212160335639,3.69497360744293,9.42541649438572,5.83899223373756,41.0937556496157,15.2278780941878,0,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.644337306610467,0,0.22237804384487,0.570676878337677,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.758671603812327,0.685491075658373,0,0.814605311381257,0.193952487167626,0.210407459670956,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.811440485554012,0.241177159752417,1.52775511068852,0,0.972811360650212,4.11842119782122,5.75072826109418,0.744281895337007,2.49630138491648,0.757736633841335,1.07638448113147,0,0,0.37898282354097,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,1.95133647857799,4.57141917907954,2.43611158613652,1.43509291791738,5.24362607090362,6.73471429276993,0,0,0,1.47529281905711,0.551873492609465,0,0,0,509.23386017122,0,0,0,0,0,0,0,0,0,0,0.425820255624806,3.73937767701236,4.0721739838394,0,0,0.242780636154981,0.302323556964751,0,3.83892460745005,0,1.03371317267288,0,16.0423820273125,0,0,0,0,0,0,0,0.354680467284547,0.891844088010353,0,0,0.23467170806371,0,2.20528398054962,16.488625294148,71.851669879678,20.6873332503575,10.8628833042854,8.69946768648825,0,3.70850604021019,0,0,0.370389054739423,0,0,0.228778173206523,0,0,0,7.63736494412091,0,0.609958401380546,0,0.209088296014469,0.218362563746178,0.809186078308924,2.31429676030941,5.75863072364865,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,54.7257011889944,0,0,0.513554785824136,0.649604114888975,0.716106782669926,1.78813219303138,0.600977247599844,2.06765338044408,0.706765149637033,0.15241361331,0.201652370273681,0.487289403698762,0,0,151.455896254961,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,3.99024873401031,5.63420898988643,26.2555254433758,3.14419743941973,12.501358574601,90.676664943059,89.2131797844412,103.015066278973,85.4116575761635,89.2247135613644,87.5226224031394,70.9802626621709,74.7173528564824,68.175901650313,73.3492284575933,58.2898159502623,58.0656753595752,63.8733146245125,76.8378363101554,85.3744438439684,71.522749882213,70.3386760344597,86.4811178962355,74.5346292889418,76.2377617104005,76.6468206336917,77.6055648741636,68.3094692644685,100.444466626735,72.7232661101187,63.8309045793651,55.2461908279081,65.2284101392917,62.694648568871,89.4321869017846,85.8529002994649,114.311400753695,246.188083372601,196.767545854608,214.47774794889|short_description=p1@Cacng1}} | ||
|EntrezGene=12299 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|UniProt=O70578,Q4KL26 | |||
|association_with_transcript=0bp_to_NM_007582,uc007may.1_5end | |||
|description=CAGE_peak_1_at_Cacng1_5end | |||
|id=chr11:107577770..107577828,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.50e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.25e-11,22;UBERON:0000026,9.49e-09,12;UBERON:0004708,9.49e-09,12;UBERON:0002101,9.49e-09,12;UBERON:0004357,9.49e-09,12;UBERON:0004347,9.49e-09,12;UBERON:0005732,9.49e-09,12;UBERON:0005733,9.49e-09,12;UBERON:0010707,7.84e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42371680799103,0,0.37863096666592,0.151143120213571,0,0,0,0,0,0,83.5644299783924,0,0,0,0,0,0,0,0,0,0,11.7609396110632,0.258937883647172,0,1.38788261412909,5.1759131313064,7.37969591219387,1.05505848386836,6.11461277105665,0.502666365318702,0.247194967734374,0.578397427679647,52.1920225650426,207.223334782631,130.075654373172,96.4901753739092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12023300235348,27.9915683872709,0,2.10441855886474,0.650602214813519,2.06911893990126,2.88099407688559,4.9732589885786,7.0757959117381,8.07116437794554,5.34099829990454,6.98499100995342,0,3.78212160335639,3.69497360744293,9.42541649438572,5.83899223373756,41.0937556496157,15.2278780941878,0,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.644337306610467,0,0.22237804384487,0.570676878337677,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.758671603812327,0.685491075658373,0,0.814605311381257,0.193952487167626,0.210407459670956,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.811440485554012,0.241177159752417,1.52775511068852,0,0.972811360650212,4.11842119782122,5.75072826109418,0.744281895337007,2.49630138491648,0.757736633841335,1.07638448113147,0,0,0.37898282354097,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,1.95133647857799,4.57141917907954,2.43611158613652,1.43509291791738,5.24362607090362,6.73471429276993,0,0,0,1.47529281905711,0.551873492609465,0,0,0,509.23386017122,0,0,0,0,0,0,0,0,0,0,0.425820255624806,3.73937767701236,4.0721739838394,0,0,0.242780636154981,0.302323556964751,0,3.83892460745005,0,1.03371317267288,0,16.0423820273125,0,0,0,0,0,0,0,0.354680467284547,0.891844088010353,0,0,0.23467170806371,0,2.20528398054962,16.488625294148,71.851669879678,20.6873332503575,10.8628833042854,8.69946768648825,0,3.70850604021019,0,0,0.370389054739423,0,0,0.228778173206523,0,0,0,7.63736494412091,0,0.609958401380546,0,0.209088296014469,0.218362563746178,0.809186078308924,2.31429676030941,5.75863072364865,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,54.7257011889944,0,0,0.513554785824136,0.649604114888975,0.716106782669926,1.78813219303138,0.600977247599844,2.06765338044408,0.706765149637033,0.15241361331,0.201652370273681,0.487289403698762,0,0,151.455896254961,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,3.99024873401031,5.63420898988643,26.2555254433758,3.14419743941973,12.501358574601,90.676664943059,89.2131797844412,103.015066278973,85.4116575761635,89.2247135613644,87.5226224031394,70.9802626621709,74.7173528564824,68.175901650313,73.3492284575933,58.2898159502623,58.0656753595752,63.8733146245125,76.8378363101554,85.3744438439684,71.522749882213,70.3386760344597,86.4811178962355,74.5346292889418,76.2377617104005,76.6468206336917,77.6055648741636,68.3094692644685,100.444466626735,72.7232661101187,63.8309045793651,55.2461908279081,65.2284101392917,62.694648568871,89.4321869017846,85.8529002994649,114.311400753695,246.188083372601,196.767545854608,214.47774794889 | |||
|short_description=p1@Cacng1 | |||
}} |
Revision as of 18:36, 12 September 2013
Short description: | p1@Cacng1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacng1_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 0bp_to_NM_007582, uc007may.1_5end |
EntrezGene: | Cacng1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 5.25e-11 | 22 |
appendage | 9.49e-09 | 12 |
paired limb/fin | 9.49e-09 | 12 |
limb | 9.49e-09 | 12 |
paired limb/fin bud | 9.49e-09 | 12 |
limb bud | 9.49e-09 | 12 |
limb/fin field | 9.49e-09 | 12 |
limb field | 9.49e-09 | 12 |
appendage girdle complex | 7.84e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.