FFCP PHASE1:Mm9::chr11:105797608..105797615,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13056|HGNC=|MCL_coexpression_id=9|UniProt=|association_with_transcript=-117bp_to_ENSMUST00000146607_5end|description=CAGE_peak_14_at_Cyb561_5end|id=chr11:105797608..105797615,-|ontology_enrichment_celltype=CL:0002604!5.57e-15!2;CL:0002605!5.57e-15!2|ontology_enrichment_celltype_v019_2=CL:0002605,9.50e-23,2;CL:0002604,9.50e-23,2;CL:0000128,1.52e-08,6;CL:0000126,1.52e-08,6;CL:0000127,1.52e-08,6;CL:0002453,9.78e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!1.95e-10!3;UBERON:0006555!1.95e-10!3;UBERON:0005103!1.95e-10!3;UBERON:0000083!1.95e-10!3;UBERON:0009201!1.95e-10!3;UBERON:0004819!1.95e-10!3;UBERON:0006553!1.95e-10!3;UBERON:0003074!1.95e-10!3;UBERON:0003060!1.95e-10!3;UBERON:0006834!4.80e-08!1;UBERON:0000080!4.82e-08!4;UBERON:0005904!4.82e-08!4;UBERON:0006947!4.82e-08!4;UBERON:0002120!4.82e-08!4;UBERON:0004054!4.82e-08!4;UBERON:0004875!4.82e-08!4;UBERON:0004876!4.82e-08!4;UBERON:0005721!4.82e-08!4;UBERON:0005754!4.82e-08!4;UBERON:0007297!4.82e-08!4;UBERON:0004175!1.45e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001301,8.02e-16,3;UBERON:0006555,8.02e-16,3;UBERON:0005103,8.02e-16,3;UBERON:0000083,8.02e-16,3;UBERON:0009201,8.02e-16,3;UBERON:0004819,8.02e-16,3;UBERON:0006553,8.02e-16,3;UBERON:0003074,8.02e-16,3;UBERON:0003060,8.02e-16,3;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0000058,1.41e-07,7;UBERON:0001954,1.64e-07,7;UBERON:0003022,1.64e-07,7;UBERON:0002421,1.64e-07,7;UBERON:0000349,1.64e-07,7;UBERON:0002600,1.64e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,6.57079171927554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p14@Cyb561}} | ||
|EntrezGene=13056 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt= | |||
|association_with_transcript=-117bp_to_ENSMUST00000146607_5end | |||
|description=CAGE_peak_14_at_Cyb561_5end | |||
|id=chr11:105797608..105797615,- | |||
|ontology_enrichment_celltype=CL:0002604!5.57e-15!2;CL:0002605!5.57e-15!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.50e-23,2;CL:0002604,9.50e-23,2;CL:0000128,1.52e-08,6;CL:0000126,1.52e-08,6;CL:0000127,1.52e-08,6;CL:0002453,9.78e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.95e-10!3;UBERON:0006555!1.95e-10!3;UBERON:0005103!1.95e-10!3;UBERON:0000083!1.95e-10!3;UBERON:0009201!1.95e-10!3;UBERON:0004819!1.95e-10!3;UBERON:0006553!1.95e-10!3;UBERON:0003074!1.95e-10!3;UBERON:0003060!1.95e-10!3;UBERON:0006834!4.80e-08!1;UBERON:0000080!4.82e-08!4;UBERON:0005904!4.82e-08!4;UBERON:0006947!4.82e-08!4;UBERON:0002120!4.82e-08!4;UBERON:0004054!4.82e-08!4;UBERON:0004875!4.82e-08!4;UBERON:0004876!4.82e-08!4;UBERON:0005721!4.82e-08!4;UBERON:0005754!4.82e-08!4;UBERON:0007297!4.82e-08!4;UBERON:0004175!1.45e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,8.02e-16,3;UBERON:0006555,8.02e-16,3;UBERON:0005103,8.02e-16,3;UBERON:0000083,8.02e-16,3;UBERON:0009201,8.02e-16,3;UBERON:0004819,8.02e-16,3;UBERON:0006553,8.02e-16,3;UBERON:0003074,8.02e-16,3;UBERON:0003060,8.02e-16,3;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0000058,1.41e-07,7;UBERON:0001954,1.64e-07,7;UBERON:0003022,1.64e-07,7;UBERON:0002421,1.64e-07,7;UBERON:0000349,1.64e-07,7;UBERON:0002600,1.64e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,6.57079171927554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p14@Cyb561 | |||
}} |
Revision as of 18:29, 12 September 2013
Short description: | p14@Cyb561 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Cyb561_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -117bp_to_ENSMUST00000146607_5end |
EntrezGene: | Cyb561 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.50e-23 | 2 |
astrocyte of the hippocampus | 9.50e-23 | 2 |
oligodendrocyte | 1.52e-08 | 6 |
macroglial cell | 1.52e-08 | 6 |
astrocyte | 1.52e-08 | 6 |
oligodendrocyte precursor cell | 9.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epididymis | 8.02e-16 | 3 |
excretory tube | 8.02e-16 | 3 |
mesonephric epithelium | 8.02e-16 | 3 |
mesonephric tubule | 8.02e-16 | 3 |
nephric duct | 8.02e-16 | 3 |
kidney epithelium | 8.02e-16 | 3 |
renal duct | 8.02e-16 | 3 |
mesonephric duct | 8.02e-16 | 3 |
pronephric duct | 8.02e-16 | 3 |
mesonephros | 3.12e-12 | 4 |
duct of male reproductive system | 3.12e-12 | 4 |
male genital duct | 3.12e-12 | 4 |
pronephros | 3.12e-12 | 4 |
internal male genitalia | 3.12e-12 | 4 |
nephrogenic cord | 3.12e-12 | 4 |
urogenital ridge | 3.12e-12 | 4 |
pronephric mesoderm | 3.12e-12 | 4 |
rostral part of nephrogenic cord | 3.12e-12 | 4 |
presumptive pronephric mesoderm | 3.12e-12 | 4 |
duct | 1.41e-07 | 7 |
Ammon's horn | 1.64e-07 | 7 |
lobe parts of cerebral cortex | 1.64e-07 | 7 |
hippocampal formation | 1.64e-07 | 7 |
limbic system | 1.64e-07 | 7 |
limbic lobe | 1.64e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.