FFCP PHASE1:Hg19::chr2:33359634..33359645,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |||
|TSSclassifier=S | |||
|UniProt=E7EV71,Q14766,B7ZLY3 | |||
|association_with_transcript=-18bp_to_ENST00000390003,ENST00000418533,NM_000627,NM_001166264,NM_001166265,NM_001166266_5end | |||
|coexpression_cluster_id=C2697 | |||
|description=CAGE_peak_5_at_LTBP1_5end | |||
|id=chr2:33359634..33359645,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.42e-31!180;CL:0000680!1.05e-20!57;CL:0000056!1.05e-20!57;CL:0000355!1.05e-20!57;CL:0000187!6.95e-20!54;CL:0000057!8.53e-19!75;CL:0000192!1.62e-18!42;CL:0000514!1.62e-18!42;CL:0000183!3.37e-18!59;CL:0000359!2.29e-16!32;CL:0000393!3.24e-15!60;CL:0000211!3.24e-15!60;CL:0002620!1.01e-08!23;CL:0000222!2.79e-08!119;CL:0002539!8.10e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.99e-16;32!CL:0000192;8.64e-15;43!CL:0000187;9.14e-12;55!CL:0002620;2.13e-09;23!CL:0000057;2.73e-09;73!CL:0000393;3.51e-09;61!CL:0000211;3.51e-09;61!CL:0002539;6.51e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.63e-23,58;CL:0000056,3.63e-23,58;CL:0000355,3.63e-23,58;CL:0000187,3.41e-22,55;CL:0000057,6.50e-21,76;CL:0000192,2.91e-20,43;CL:0000514,2.91e-20,43;CL:0000393,6.50e-18,61;CL:0000211,6.50e-18,61;CL:0000359,1.86e-17,32;CL:0000222,1.06e-09,121;CL:0002620,1.96e-09,23;CL:0000723,2.60e-07,433;CL:0000048,2.78e-07,427;CL:0002539,6.51e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;8.64e-15;43!CL:0000355;1.17e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p5@LTBP1 | |||
}} |
Revision as of 18:21, 12 September 2013
Short description: | p5@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LTBP1_5end |
Coexpression cluster: | C2697_Chondrocyte_mesenchymal_Fibroblast_Smooth_Anulus_hepatic_aorta |
Association with transcript: | -18bp_to_ENST00000390003, ENST00000418533, NM_000627, NM_001166264, NM_001166265, NM_001166266_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | E7EV71Q14766B7ZLY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.63e-23 | 58 |
myoblast | 3.63e-23 | 58 |
multi-potent skeletal muscle stem cell | 3.63e-23 | 58 |
muscle cell | 3.41e-22 | 55 |
fibroblast | 6.50e-21 | 76 |
smooth muscle cell | 2.91e-20 | 43 |
smooth muscle myoblast | 2.91e-20 | 43 |
electrically responsive cell | 6.50e-18 | 61 |
electrically active cell | 6.50e-18 | 61 |
vascular associated smooth muscle cell | 1.86e-17 | 32 |
mesodermal cell | 1.06e-09 | 121 |
skin fibroblast | 1.96e-09 | 23 |
somatic stem cell | 2.60e-07 | 433 |
multi fate stem cell | 2.78e-07 | 427 |
aortic smooth muscle cell | 6.51e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.