FFCP PHASE1:Hg19::chr2:29353477..29353508,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26108|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000471165_5end|description=CAGE_peak_11_at_CLIP4_5end|id=chr2:29353477..29353508,+|ontology_enrichment_celltype=CL:0000077!1.22e-09!19;CL:0000066!1.91e-09!254;CL:0000076!3.16e-08!62;CL:0000082!4.27e-07!19|ontology_enrichment_celltype_v019=CL:0002553;1.82e-13;1!CL:0000319;3.33e-13;1!CL:0000082;2.93e-10;19!CL:0000159;3.09e-07;2|ontology_enrichment_celltype_v019_2=CL:0002553,1.82e-13,1;CL:0000319,3.33e-13,1;CL:0000082,2.79e-10,19;CL:0000159,3.09e-07,2|ontology_enrichment_development_v019=UBERON:0001041;8.52e-19;30!UBERON:0007123;3.58e-10;5!UBERON:0009497;7.67e-09;13!UBERON:0008947;8.79e-07;29|ontology_enrichment_disease=DOID:305!1.40e-23!106;DOID:0050687!6.58e-22!143;DOID:162!9.42e-17!235;DOID:14566!5.65e-16!239;DOID:1749!5.63e-12!14;DOID:0050615!5.29e-11!16;DOID:1324!1.13e-09!15|ontology_enrichment_disease_v019=DOID:0050615;2.23e-18;16!DOID:5662;2.46e-13;1!DOID:3030;3.33e-13;1!DOID:1324;6.21e-13;15!DOID:0050619;7.24e-13;1!DOID:1357;7.24e-13;1!DOID:6193;7.24e-13;1!DOID:1749;3.38e-08;14!DOID:3350;4.55e-07;2|ontology_enrichment_disease_v019_2=DOID:0050615,2.04e-18,16;DOID:5662,2.32e-13,1;DOID:3030,3.33e-13,1;DOID:1324,5.84e-13,15;DOID:0050619,6.82e-13,1;DOID:1357,6.82e-13,1;DOID:6193,9.73e-13,1;DOID:0050687,3.34e-12,143;DOID:305,4.84e-12,106;DOID:162,2.89e-09,235;DOID:14566,4.97e-09,239;DOID:1749,3.50e-08,14;DOID:7,1.66e-07,39;DOID:3350,5.28e-07,2|ontology_enrichment_uberon=UBERON:0005911!4.09e-08!82;UBERON:0005153!3.00e-07!37;UBERON:0004802!4.27e-07!19;UBERON:0000115!4.27e-07!19;UBERON:0003343!5.10e-07!4;UBERON:0004785!5.10e-07!4;UBERON:0002048!7.10e-07!22;UBERON:0000117!7.10e-07!22;UBERON:0000171!7.10e-07!22;UBERON:0000170!7.10e-07!22;UBERON:0005597!7.10e-07!22;UBERON:0000118!7.10e-07!22;UBERON:0000974!7.16e-07!10|ontology_enrichment_uberon_v019=UBERON:0001764;7.24e-13;1!UBERON:0001825;7.24e-13;1!UBERON:0003343;1.13e-12;4!UBERON:0004785;1.13e-12;4!UBERON:0004802;2.93e-10;19!UBERON:0000115;2.93e-10;19!UBERON:0002046;3.58e-10;5!UBERON:0002048;6.90e-09;22!UBERON:0004807;6.90e-09;22!UBERON:0000117;6.90e-09;22!UBERON:0000171;6.90e-09;22!UBERON:0000170;6.90e-09;22!UBERON:0000974;9.45e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.82e-13,1;UBERON:0001825,6.82e-13,1;UBERON:0003343,1.23e-12,4;UBERON:0004785,1.23e-12,4;UBERON:0005911,1.37e-10,82;UBERON:0004802,2.79e-10,19;UBERON:0000115,2.79e-10,19;UBERON:0002046,3.59e-10,5;UBERON:0004117,3.59e-10,5;UBERON:0007689,3.59e-10,5;UBERON:0007123,3.59e-10,5;UBERON:0003091,3.59e-10,5;UBERON:0002048,6.62e-09,22;UBERON:0000117,6.62e-09,22;UBERON:0000171,6.62e-09,22;UBERON:0000170,6.62e-09,22;UBERON:0005597,6.62e-09,22;UBERON:0000118,6.62e-09,22;UBERON:0001007,2.68e-08,145;UBERON:0001555,2.68e-08,145;UBERON:0007026,2.68e-08,145;UBERON:0004119,2.20e-07,160;UBERON:0000925,2.20e-07,160;UBERON:0006595,2.20e-07,160;UBERON:0001004,3.55e-07,74;UBERON:0004807,4.94e-07,28|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,7.51888933637558,0,0.690503839458535,0,0,0,0,0,0,0,0,0.455173793141999,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000471165_5end | |||
|description=CAGE_peak_11_at_CLIP4_5end | |||
|id=chr2:29353477..29353508,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.22e-09!19;CL:0000066!1.91e-09!254;CL:0000076!3.16e-08!62;CL:0000082!4.27e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.82e-13;1!CL:0000319;3.33e-13;1!CL:0000082;2.93e-10;19!CL:0000159;3.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.82e-13,1;CL:0000319,3.33e-13,1;CL:0000082,2.79e-10,19;CL:0000159,3.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.52e-19;30!UBERON:0007123;3.58e-10;5!UBERON:0009497;7.67e-09;13!UBERON:0008947;8.79e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.40e-23!106;DOID:0050687!6.58e-22!143;DOID:162!9.42e-17!235;DOID:14566!5.65e-16!239;DOID:1749!5.63e-12!14;DOID:0050615!5.29e-11!16;DOID:1324!1.13e-09!15 | |||
|ontology_enrichment_disease_v019=DOID:0050615;2.23e-18;16!DOID:5662;2.46e-13;1!DOID:3030;3.33e-13;1!DOID:1324;6.21e-13;15!DOID:0050619;7.24e-13;1!DOID:1357;7.24e-13;1!DOID:6193;7.24e-13;1!DOID:1749;3.38e-08;14!DOID:3350;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,2.04e-18,16;DOID:5662,2.32e-13,1;DOID:3030,3.33e-13,1;DOID:1324,5.84e-13,15;DOID:0050619,6.82e-13,1;DOID:1357,6.82e-13,1;DOID:6193,9.73e-13,1;DOID:0050687,3.34e-12,143;DOID:305,4.84e-12,106;DOID:162,2.89e-09,235;DOID:14566,4.97e-09,239;DOID:1749,3.50e-08,14;DOID:7,1.66e-07,39;DOID:3350,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005911!4.09e-08!82;UBERON:0005153!3.00e-07!37;UBERON:0004802!4.27e-07!19;UBERON:0000115!4.27e-07!19;UBERON:0003343!5.10e-07!4;UBERON:0004785!5.10e-07!4;UBERON:0002048!7.10e-07!22;UBERON:0000117!7.10e-07!22;UBERON:0000171!7.10e-07!22;UBERON:0000170!7.10e-07!22;UBERON:0005597!7.10e-07!22;UBERON:0000118!7.10e-07!22;UBERON:0000974!7.16e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;7.24e-13;1!UBERON:0001825;7.24e-13;1!UBERON:0003343;1.13e-12;4!UBERON:0004785;1.13e-12;4!UBERON:0004802;2.93e-10;19!UBERON:0000115;2.93e-10;19!UBERON:0002046;3.58e-10;5!UBERON:0002048;6.90e-09;22!UBERON:0004807;6.90e-09;22!UBERON:0000117;6.90e-09;22!UBERON:0000171;6.90e-09;22!UBERON:0000170;6.90e-09;22!UBERON:0000974;9.45e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.82e-13,1;UBERON:0001825,6.82e-13,1;UBERON:0003343,1.23e-12,4;UBERON:0004785,1.23e-12,4;UBERON:0005911,1.37e-10,82;UBERON:0004802,2.79e-10,19;UBERON:0000115,2.79e-10,19;UBERON:0002046,3.59e-10,5;UBERON:0004117,3.59e-10,5;UBERON:0007689,3.59e-10,5;UBERON:0007123,3.59e-10,5;UBERON:0003091,3.59e-10,5;UBERON:0002048,6.62e-09,22;UBERON:0000117,6.62e-09,22;UBERON:0000171,6.62e-09,22;UBERON:0000170,6.62e-09,22;UBERON:0005597,6.62e-09,22;UBERON:0000118,6.62e-09,22;UBERON:0001007,2.68e-08,145;UBERON:0001555,2.68e-08,145;UBERON:0007026,2.68e-08,145;UBERON:0004119,2.20e-07,160;UBERON:0000925,2.20e-07,160;UBERON:0006595,2.20e-07,160;UBERON:0001004,3.55e-07,74;UBERON:0004807,4.94e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,7.51888933637558,0,0.690503839458535,0,0,0,0,0,0,0,0,0.455173793141999,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,1.42304773014896,0.138674673013139,0.173559738335131,0.0979923974143777,0.522355239482415,0.34945333648406,1.0319161948297,0.967563312890852,0.730893170861856,0.410577285266046,0.0969890164884194,0.0882561266915003,0,0,0,0,0.391102765469606,0.561111741760736,0,0,0,0,0,0,0.621262677827163,0.235694034616795,0,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,2.26383207483922,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.314727528809989,0,0.896436696664224,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0.513260513652988,1.40963004463334,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,1.25643277000187,0,0,0,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0.521988583930423,0,0,0.489473409012935,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0.844712203265363,5.63731340893483,0.690860683462397,1.21543982470953,0,0,0,0,0.327609848846413,3.44082072255207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0057074828547,0,0,0,0,0,0,0,0,0,0,1.17777262201231,4.9547283806051,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,5.83059232087223,0,0,0.590969204419841,0,0.156986185701028,0,0.280272163313789,0,0.863710364874486,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.335566295393377,0.196300467230486,0.121917924982269,0,0.102662806856247,0,0,0,0,0,2.823652050974,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0,0,0,0,15.0853769375636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0.0645889098360061,0,0,1.52753179867596,1.0105859447911,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@CLIP4 | |||
}} |
Revision as of 18:15, 12 September 2013
Short description: | p11@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CLIP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471165_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.82e-13 | 1 |
mucus secreting cell | 3.33e-13 | 1 |
epithelial cell of lung | 2.79e-10 | 19 |
seromucus secreting cell | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.82e-13 | 1 |
paranasal sinus | 6.82e-13 | 1 |
mucosa of oral region | 1.23e-12 | 4 |
respiratory system mucosa | 1.23e-12 | 4 |
endo-epithelium | 1.37e-10 | 82 |
respiratory tract epithelium | 2.79e-10 | 19 |
lung epithelium | 2.79e-10 | 19 |
thyroid gland | 3.59e-10 | 5 |
pharyngeal pouch | 3.59e-10 | 5 |
thyroid diverticulum | 3.59e-10 | 5 |
pharyngeal pouch 2 | 3.59e-10 | 5 |
thyroid primordium | 3.59e-10 | 5 |
lung | 6.62e-09 | 22 |
respiratory tube | 6.62e-09 | 22 |
respiration organ | 6.62e-09 | 22 |
pair of lungs | 6.62e-09 | 22 |
lung primordium | 6.62e-09 | 22 |
lung bud | 6.62e-09 | 22 |
digestive system | 2.68e-08 | 145 |
digestive tract | 2.68e-08 | 145 |
primitive gut | 2.68e-08 | 145 |
endoderm-derived structure | 2.20e-07 | 160 |
endoderm | 2.20e-07 | 160 |
presumptive endoderm | 2.20e-07 | 160 |
respiratory system | 3.55e-07 | 74 |
respiratory system epithelium | 4.94e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 2.04e-18 | 16 |
pleomorphic carcinoma | 2.32e-13 | 1 |
mucinous adenocarcinoma | 3.33e-13 | 1 |
lung cancer | 5.84e-13 | 15 |
paranasal sinus cancer | 6.82e-13 | 1 |
maxillary sinus cancer | 6.82e-13 | 1 |
epithelioid sarcoma | 9.73e-13 | 1 |
cell type cancer | 3.34e-12 | 143 |
carcinoma | 4.84e-12 | 106 |
cancer | 2.89e-09 | 235 |
disease of cellular proliferation | 4.97e-09 | 239 |
squamous cell carcinoma | 3.50e-08 | 14 |
disease of anatomical entity | 1.66e-07 | 39 |
mesenchymal cell neoplasm | 5.28e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.