FFCP PHASE1:Hg19::chr2:241375069..241375136,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |||
|TSSclassifier=S | |||
|UniProt=P35052 | |||
|association_with_transcript=0bp_to_ENST00000264039,NM_002081,uc002vyw.3_5end | |||
|coexpression_cluster_id=C1899 | |||
|description=CAGE_peak_1_at_GPC1_5end | |||
|id=chr2:241375069..241375136,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-29!180;CL:0000220!1.21e-22!246;CL:0002321!2.43e-22!248;CL:0000057!6.80e-17!75;CL:0000183!8.30e-12!59;CL:0000680!4.82e-11!57;CL:0000056!4.82e-11!57;CL:0000355!4.82e-11!57;CL:0000222!7.38e-11!119;CL:0000187!2.24e-10!54;CL:0000393!4.44e-10!60;CL:0000211!4.44e-10!60;CL:0000066!9.42e-10!254;CL:0000548!8.02e-08!679;CL:0000004!8.02e-08!679;CL:0000255!8.02e-08!679;CL:0002076!2.55e-07!43;CL:0000012!4.04e-07!682;CL:0000144!5.03e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000057;3.33e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.08e-22,250;CL:0000057,3.70e-17,76;CL:0000680,1.58e-11,58;CL:0000056,1.58e-11,58;CL:0000355,1.58e-11,58;CL:0000222,2.86e-11,121;CL:0000187,7.47e-11,55;CL:0000393,1.55e-10,61;CL:0000211,1.55e-10,61;CL:0000066,3.54e-09,253;CL:0000192,4.46e-07,43;CL:0000514,4.46e-07,43;CL:0002076,5.40e-07,42;CL:0000076,6.06e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@GPC1 | |||
}} |
Revision as of 17:45, 12 September 2013
Short description: | p1@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GPC1_5end |
Coexpression cluster: | C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes |
Association with transcript: | 0bp_to_ENST00000264039, NM_002081, uc002vyw.3_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.08e-22 | 250 |
fibroblast | 3.70e-17 | 76 |
muscle precursor cell | 1.58e-11 | 58 |
myoblast | 1.58e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-11 | 58 |
mesodermal cell | 2.86e-11 | 121 |
muscle cell | 7.47e-11 | 55 |
electrically responsive cell | 1.55e-10 | 61 |
electrically active cell | 1.55e-10 | 61 |
epithelial cell | 3.54e-09 | 253 |
smooth muscle cell | 4.46e-07 | 43 |
smooth muscle myoblast | 4.46e-07 | 43 |
endo-epithelial cell | 5.40e-07 | 42 |
squamous epithelial cell | 6.06e-07 | 63 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.