FFCP PHASE1:Mm9::chr10:79578978..79579011,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20869|HGNC=|MCL_coexpression_id=0|UniProt=D6RGT4|association_with_transcript=-80bp_to_ENSMUST00000105371,uc007gbt.1_5end|description=CAGE_peak_4_at_Stk11_5end|id=chr10:79578978..79579011,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.16e-20,3;CL:0002006,1.16e-20,3;CL:0002024,1.16e-20,3;CL:0000553,1.19e-10,6;CL:0000556,1.19e-10,6;CL:0002293,3.30e-10,3;CL:0000839,1.86e-08,13;CL:0000050,2.80e-07,9;CL:0000763,6.54e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-07,16|phase1_expression=0,0,0,0,0,0.503637815735669,0,0.129123323441576,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,1.66554880907831,2.42970320867791,2.09868563438444,0.157731082679119,0,0,6.29320347117916,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0.971020706062307,0.251793635951155,0,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,1.68533304158102,0,0,0,0,0,5.09610479413291,7.11066703153331,0,0.253359865475099,0,1.7127581957859,0,0,0.346970653532272,0,0.230615497256059,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0.505445516867349,0,0,0,0,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0.402619256281115,0,0.205809224758569,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0.333690211432188,0,0.449724224769707,0.811440485554012,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0,0.339490171550376,0,0,0,0.585400943573396,0,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,1.63171705145613,0.491764273019036,0,0,0.117211686592203,0.327869890753351,0,0.315508219416257,0,0.215423397732799,0,0,0,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0,0,0.119372344003136,0,0.291480836629851,0.18542530201051,0.341741761595705,0,0.370389054739423,0.376736914009382,0.956859594047176,0.457556346413045,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0.404593039154462,0.0826534557253359,0.26175594198403,0.129614973291793,0,117.248131246312,0.149516546043979,0,0.388902376688095,0.645799117388655,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,22.4673232368186,61.0623613266675,0,0.405450430580328,0,0,0.358053391334963,0.198681354781265,0,0,0.302899349844443,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.443971906748129,0,0.503653849092235,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.187283014939765,0.128050304809739,0,0.476293691283074,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0.532427418478012,0.715308569841963,0,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,1.22769312950907,0.309873682371932,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p4@Stk11}} | ||
|EntrezGene=20869 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=D6RGT4 | |||
|association_with_transcript=-80bp_to_ENSMUST00000105371,uc007gbt.1_5end | |||
|description=CAGE_peak_4_at_Stk11_5end | |||
|id=chr10:79578978..79579011,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.16e-20,3;CL:0002006,1.16e-20,3;CL:0002024,1.16e-20,3;CL:0000553,1.19e-10,6;CL:0000556,1.19e-10,6;CL:0002293,3.30e-10,3;CL:0000839,1.86e-08,13;CL:0000050,2.80e-07,9;CL:0000763,6.54e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-07,16 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0.129123323441576,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,1.66554880907831,2.42970320867791,2.09868563438444,0.157731082679119,0,0,6.29320347117916,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0.971020706062307,0.251793635951155,0,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.210324961351382,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,1.68533304158102,0,0,0,0,0,5.09610479413291,7.11066703153331,0,0.253359865475099,0,1.7127581957859,0,0,0.346970653532272,0,0.230615497256059,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0.505445516867349,0,0,0,0,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0.402619256281115,0,0.205809224758569,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0.333690211432188,0,0.449724224769707,0.811440485554012,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0,0.339490171550376,0,0,0,0.585400943573396,0,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,1.63171705145613,0.491764273019036,0,0,0.117211686592203,0.327869890753351,0,0.315508219416257,0,0.215423397732799,0,0,0,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0.220528398054962,0.49465875882444,0,0,0.119372344003136,0,0.291480836629851,0.18542530201051,0.341741761595705,0,0.370389054739423,0.376736914009382,0.956859594047176,0.457556346413045,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0.404593039154462,0.0826534557253359,0.26175594198403,0.129614973291793,0,117.248131246312,0.149516546043979,0,0.388902376688095,0.645799117388655,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,22.4673232368186,61.0623613266675,0,0.405450430580328,0,0,0.358053391334963,0.198681354781265,0,0,0.302899349844443,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.443971906748129,0,0.503653849092235,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.187283014939765,0.128050304809739,0,0.476293691283074,0.347652977834566,0,0.412085900803307,0.294397840268795,0,0.532427418478012,0.715308569841963,0,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,1.22769312950907,0.309873682371932,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p4@Stk11 | |||
}} |
Revision as of 17:34, 12 September 2013
Short description: | p4@Stk11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Stk11_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -80bp_to_ENSMUST00000105371, uc007gbt.1_5end |
EntrezGene: | Stk11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.16e-20 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.16e-20 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.16e-20 | 3 |
megakaryocyte progenitor cell | 1.19e-10 | 6 |
megakaryocyte | 1.19e-10 | 6 |
epithelial cell of thymus | 3.30e-10 | 3 |
myeloid lineage restricted progenitor cell | 1.86e-08 | 13 |
megakaryocyte-erythroid progenitor cell | 2.80e-07 | 9 |
myeloid cell | 6.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.