FFCP PHASE1:Mm9::chr10:79277411..79277429,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=173|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79277411..79277429,+|id=chr10:79277411..79277429,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.25e-15!14;UBERON:0003918!2.25e-15!14;UBERON:0005095!2.25e-15!14;UBERON:0007687!2.25e-15!14;UBERON:0006554!4.56e-13!16;UBERON:0001008!4.04e-12!17;UBERON:0000489!6.67e-11!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.89e-56,14;UBERON:0003918,9.89e-56,14;UBERON:0011143,9.89e-56,14;UBERON:0005095,9.89e-56,14;UBERON:0007687,9.89e-56,14;UBERON:0006554,2.31e-43,18;UBERON:0001008,4.40e-41,19;UBERON:0000489,3.58e-37,21;UBERON:0003103,4.15e-18,43;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0009569,1.02e-11,66;UBERON:0005177,9.73e-10,79;UBERON:0002100,1.67e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,4.1726938209678,3.08470984046268,3.38123207019241,5.49858585182348,5.04276466635827,3.92760591385784,2.21327879934901,0.885660887877613,0.941992367048249,1.72756029490521,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890328018336276,0.325773918707152,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.883193520806384,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p@chr10:79277411..79277429,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:79277411..79277429,+ | |||
|id=chr10:79277411..79277429,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.25e-15!14;UBERON:0003918!2.25e-15!14;UBERON:0005095!2.25e-15!14;UBERON:0007687!2.25e-15!14;UBERON:0006554!4.56e-13!16;UBERON:0001008!4.04e-12!17;UBERON:0000489!6.67e-11!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.89e-56,14;UBERON:0003918,9.89e-56,14;UBERON:0011143,9.89e-56,14;UBERON:0005095,9.89e-56,14;UBERON:0007687,9.89e-56,14;UBERON:0006554,2.31e-43,18;UBERON:0001008,4.40e-41,19;UBERON:0000489,3.58e-37,21;UBERON:0003103,4.15e-18,43;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0009569,1.02e-11,66;UBERON:0005177,9.73e-10,79;UBERON:0002100,1.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,4.1726938209678,3.08470984046268,3.38123207019241,5.49858585182348,5.04276466635827,3.92760591385784,2.21327879934901,0.885660887877613,0.941992367048249,1.72756029490521,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890328018336276,0.325773918707152,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.883193520806384,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p@chr10:79277411..79277429,+ | |||
}} |
Revision as of 17:31, 12 September 2013
Short description: | p@chr10:79277411..79277429, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79277411..79277429, + |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 9.89e-56 | 14 |
kidney mesenchyme | 9.89e-56 | 14 |
upper urinary tract | 9.89e-56 | 14 |
kidney rudiment | 9.89e-56 | 14 |
kidney field | 9.89e-56 | 14 |
urinary system structure | 2.31e-43 | 18 |
renal system | 4.40e-41 | 19 |
cavitated compound organ | 3.58e-37 | 21 |
compound organ | 4.15e-18 | 43 |
abdomen element | 7.21e-16 | 49 |
abdominal segment element | 7.21e-16 | 49 |
abdominal segment of trunk | 7.21e-16 | 49 |
abdomen | 7.21e-16 | 49 |
mesenchyme | 1.06e-12 | 61 |
entire embryonic mesenchyme | 1.06e-12 | 61 |
subdivision of trunk | 1.02e-11 | 66 |
trunk region element | 9.73e-10 | 79 |
trunk | 1.67e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.