FFCP PHASE1:Mm9::chr10:7552113..7552123,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=237256|HGNC=|MCL_coexpression_id=553|UniProt=E9QNR7,E9Q3F1,Q8BIY3|association_with_transcript=-144bp_to_ENSMUST00000039484,ENSMUST00000163689,NM_172785,uc007eiq.2_5end|description=CAGE_peak_4_at_Zc3h12d_5end|id=chr10:7552113..7552123,+|ontology_enrichment_celltype=CL:0000791!1.38e-10!9;CL:0000789!1.38e-10!9;CL:0002420!1.38e-10!9;CL:0002419!1.38e-10!9;CL:0000790!1.38e-10!9;CL:0000624!1.14e-09!8;CL:0000838!2.10e-09!12;CL:0002031!4.07e-09!25;CL:0000542!1.77e-08!13;CL:0000051!1.77e-08!13;CL:0000084!2.96e-08!11;CL:0000827!2.96e-08!11;CL:0000893!3.03e-07!6;CL:0002489!3.03e-07!6;CL:0000898!3.03e-07!6;CL:0000809!3.03e-07!6;CL:0000810!3.03e-07!6;CL:0000895!3.03e-07!6;CL:0000808!3.03e-07!6;CL:0000894!3.03e-07!6;CL:0000806!3.03e-07!6;CL:0000807!3.03e-07!6;CL:0000805!3.03e-07!6;CL:0002425!3.03e-07!6;CL:0002436!3.03e-07!6;CL:0002427!3.03e-07!6;CL:0002428!3.03e-07!6;CL:0002429!3.03e-07!6;CL:0002433!3.03e-07!6;CL:0002431!3.03e-07!6;CL:0002432!3.03e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,2.71e-14,6;CL:0000556,2.71e-14,6;CL:0000050,9.79e-10,9;CL:0000839,6.60e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.10e-12!70;UBERON:0000344!7.09e-10!15;UBERON:0004923!8.82e-10!24;UBERON:0001007!1.56e-09!128;UBERON:0001555!1.56e-09!128;UBERON:0007026!1.56e-09!128;UBERON:0003929!2.00e-09!55;UBERON:0004119!3.40e-09!130;UBERON:0000925!3.40e-09!130;UBERON:0006595!3.40e-09!130;UBERON:0002193!3.89e-09!48;UBERON:0005057!1.50e-08!51;UBERON:0004921!1.73e-08!126;UBERON:0004185!1.73e-08!126;UBERON:0001242!4.19e-08!13;UBERON:0000060!4.19e-08!13;UBERON:0001262!4.19e-08!13;UBERON:0004786!4.19e-08!13;UBERON:0005911!4.30e-08!69;UBERON:0000490!1.86e-07!66;UBERON:0002390!4.36e-07!45;UBERON:0003061!4.36e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.04e-10,1;UBERON:0001097,3.04e-10,1;UBERON:0003968,3.04e-10,1;UBERON:0001467,3.04e-10,1|phase1_expression=0,0.348975407639361,0.454999239389536,1.20985684522732,0.500895729946347,0,0.467225281191051,0.903863264091034,0.140788722151667,0.468129052643987,0.513653904676515,1.03703806693937,0.171200729931206,0.611942816932982,0.666219523631325,0.607425802169478,0,2.36596624018678,2.74228867211478,2.97072756258621,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,1.39398891278057,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0,0.505157755894224,0.538192240565737,1.4473305640901,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0,0.185194527369712,0.376736914009382,0.546776910884101,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p4@Zc3h12d}} | ||
|EntrezGene=237256 | |||
|HGNC= | |||
|MCL_coexpression_id=553 | |||
|UniProt=E9QNR7,E9Q3F1,Q8BIY3 | |||
|association_with_transcript=-144bp_to_ENSMUST00000039484,ENSMUST00000163689,NM_172785,uc007eiq.2_5end | |||
|description=CAGE_peak_4_at_Zc3h12d_5end | |||
|id=chr10:7552113..7552123,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.38e-10!9;CL:0000789!1.38e-10!9;CL:0002420!1.38e-10!9;CL:0002419!1.38e-10!9;CL:0000790!1.38e-10!9;CL:0000624!1.14e-09!8;CL:0000838!2.10e-09!12;CL:0002031!4.07e-09!25;CL:0000542!1.77e-08!13;CL:0000051!1.77e-08!13;CL:0000084!2.96e-08!11;CL:0000827!2.96e-08!11;CL:0000893!3.03e-07!6;CL:0002489!3.03e-07!6;CL:0000898!3.03e-07!6;CL:0000809!3.03e-07!6;CL:0000810!3.03e-07!6;CL:0000895!3.03e-07!6;CL:0000808!3.03e-07!6;CL:0000894!3.03e-07!6;CL:0000806!3.03e-07!6;CL:0000807!3.03e-07!6;CL:0000805!3.03e-07!6;CL:0002425!3.03e-07!6;CL:0002436!3.03e-07!6;CL:0002427!3.03e-07!6;CL:0002428!3.03e-07!6;CL:0002429!3.03e-07!6;CL:0002433!3.03e-07!6;CL:0002431!3.03e-07!6;CL:0002432!3.03e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.71e-14,6;CL:0000556,2.71e-14,6;CL:0000050,9.79e-10,9;CL:0000839,6.60e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.10e-12!70;UBERON:0000344!7.09e-10!15;UBERON:0004923!8.82e-10!24;UBERON:0001007!1.56e-09!128;UBERON:0001555!1.56e-09!128;UBERON:0007026!1.56e-09!128;UBERON:0003929!2.00e-09!55;UBERON:0004119!3.40e-09!130;UBERON:0000925!3.40e-09!130;UBERON:0006595!3.40e-09!130;UBERON:0002193!3.89e-09!48;UBERON:0005057!1.50e-08!51;UBERON:0004921!1.73e-08!126;UBERON:0004185!1.73e-08!126;UBERON:0001242!4.19e-08!13;UBERON:0000060!4.19e-08!13;UBERON:0001262!4.19e-08!13;UBERON:0004786!4.19e-08!13;UBERON:0005911!4.30e-08!69;UBERON:0000490!1.86e-07!66;UBERON:0002390!4.36e-07!45;UBERON:0003061!4.36e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.04e-10,1;UBERON:0001097,3.04e-10,1;UBERON:0003968,3.04e-10,1;UBERON:0001467,3.04e-10,1 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,1.20985684522732,0.500895729946347,0,0.467225281191051,0.903863264091034,0.140788722151667,0.468129052643987,0.513653904676515,1.03703806693937,0.171200729931206,0.611942816932982,0.666219523631325,0.607425802169478,0,2.36596624018678,2.74228867211478,2.97072756258621,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0,0.408338712524738,0,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,1.39398891278057,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0,0.505157755894224,0.538192240565737,1.4473305640901,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0,0.185194527369712,0.376736914009382,0.546776910884101,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Zc3h12d | |||
}} |
Revision as of 17:23, 12 September 2013
Short description: | p4@Zc3h12d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zc3h12d_5end |
Coexpression cluster: | MCL_coexpression_mm9:553 |
Association with transcript: | -144bp_to_ENSMUST00000039484, ENSMUST00000163689, NM_172785, uc007eiq.2_5end |
EntrezGene: | Zc3h12d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.71e-14 | 6 |
megakaryocyte | 2.71e-14 | 6 |
megakaryocyte-erythroid progenitor cell | 9.79e-10 | 9 |
myeloid lineage restricted progenitor cell | 6.60e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.04e-10 | 1 |
axillary lymph node | 3.04e-10 | 1 |
peripheral lymph node | 3.04e-10 | 1 |
shoulder | 3.04e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.