FFCP PHASE1:Mm9::chr10:126516020..126516021,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216439|HGNC=|MCL_coexpression_id=2|UniProt=Q3UHD9|association_with_transcript=57bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end|description=CAGE_peak_7_at_Agap2_5end|id=chr10:126516020..126516021,+|ontology_enrichment_celltype=CL:0000117!6.74e-15!23;CL:0000337!6.74e-15!23;CL:0000540!1.27e-10!33;CL:0000047!1.27e-10!33;CL:0000031!1.27e-10!33;CL:0000404!1.27e-10!33;CL:0000393!9.12e-09!39;CL:0000211!9.12e-09!39;CL:0002319!1.84e-08!43;CL:0000221!4.08e-08!44;CL:0000133!4.08e-08!44;CL:0000055!5.85e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.37e-13,23;CL:0000337,1.37e-13,23;CL:0000540,7.14e-09,33;CL:0000047,7.14e-09,33;CL:0000031,7.14e-09,33;CL:0000404,7.14e-09,33;CL:0000393,3.29e-07,39;CL:0000211,3.29e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.78e-30!52;UBERON:0005068!2.78e-30!52;UBERON:0006241!2.78e-30!52;UBERON:0007135!2.78e-30!52;UBERON:0001017!3.34e-30!73;UBERON:0005743!3.34e-30!73;UBERON:0000073!6.12e-29!75;UBERON:0001016!6.12e-29!75;UBERON:0000955!2.00e-27!50;UBERON:0006238!2.00e-27!50;UBERON:0002616!3.08e-26!49;UBERON:0002020!2.89e-25!34;UBERON:0003080!8.59e-23!40;UBERON:0002346!1.87e-22!71;UBERON:0003075!1.87e-22!71;UBERON:0007284!1.87e-22!71;UBERON:0000033!2.92e-22!63;UBERON:0002780!6.76e-22!39;UBERON:0001890!6.76e-22!39;UBERON:0006240!6.76e-22!39;UBERON:0002791!1.71e-20!29;UBERON:0003528!1.71e-20!29;UBERON:0001893!1.71e-20!29;UBERON:0004121!2.74e-20!102;UBERON:0000924!2.74e-20!102;UBERON:0006601!2.74e-20!102;UBERON:0003056!1.09e-18!49;UBERON:0000956!1.87e-16!21;UBERON:0001869!1.87e-16!21;UBERON:0000203!1.87e-16!21;UBERON:0007811!2.19e-13!86;UBERON:0002619!7.58e-13!17;UBERON:0002021!1.06e-12!10;UBERON:0000411!1.06e-12!10;UBERON:0001950!1.06e-12!10;UBERON:0000153!3.89e-11!94;UBERON:0000025!9.16e-09!114;UBERON:0004111!6.41e-08!122;UBERON:0003076!7.76e-08!12;UBERON:0003057!7.76e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.36e-33,34;UBERON:0000073,6.05e-32,54;UBERON:0003528,9.36e-32,29;UBERON:0002791,9.36e-32,29;UBERON:0001893,9.36e-32,29;UBERON:0001017,5.43e-29,73;UBERON:0002780,1.57e-28,39;UBERON:0001890,1.57e-28,39;UBERON:0006240,1.57e-28,39;UBERON:0000955,1.83e-28,47;UBERON:0006238,1.83e-28,47;UBERON:0001016,4.34e-28,75;UBERON:0003080,1.02e-27,40;UBERON:0001049,1.55e-27,52;UBERON:0005068,1.55e-27,52;UBERON:0006241,1.55e-27,52;UBERON:0007135,1.55e-27,52;UBERON:0002616,3.35e-26,46;UBERON:0002021,1.99e-25,10;UBERON:0000411,1.99e-25,10;UBERON:0001950,1.99e-25,10;UBERON:0000956,2.08e-23,21;UBERON:0001869,2.08e-23,21;UBERON:0000203,2.08e-23,21;UBERON:0003056,7.11e-22,49;UBERON:0002346,1.58e-21,64;UBERON:0003075,1.58e-21,64;UBERON:0007284,1.58e-21,64;UBERON:0002619,2.40e-21,17;UBERON:0004121,3.83e-21,95;UBERON:0000924,3.83e-21,95;UBERON:0006601,3.83e-21,95;UBERON:0010371,2.59e-18,73;UBERON:0010314,1.39e-13,92;UBERON:0000025,4.51e-10,114;UBERON:0000369,9.63e-10,5;UBERON:0002435,9.63e-10,5;UBERON:0000204,9.63e-10,5;UBERON:0010082,9.63e-10,5;UBERON:0002420,2.85e-09,8;UBERON:0007245,2.85e-09,8;UBERON:0010009,2.85e-09,8;UBERON:0010011,2.85e-09,8;UBERON:0000454,2.85e-09,8;UBERON:0004111,4.15e-09,122;UBERON:0011216,9.78e-08,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.675029691658453,0.420649922702764,0.856952953211411,1.10434270475807,0,1.15014565221884,0.919218786610021,0,2.42605942361857,3.22573719838111,1.05509030184155,0.914876436024097,2.08365348222704,0,0,2.13917546887534,0.589257170947335,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,1.46612694769419,0,0,0,0,0.898743836428936,1.37250180845588,1.38219787324151,1.91206752211504,2.55715457330331,2.28566849015516,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,4.41608891984667,0.92614151141356,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,3.53453448063988,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,3.3885110557024,4.60325236507177,5.15605962095457,7.38968684077857,1.37016503954128,3.0215755895588,1.35004500046361,2.2516060161211,0.906284817968409,3.10656187051092,0,0,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0,0.468207537349412,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0|short_description=p7@Agap2}} | ||
|EntrezGene=216439 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q3UHD9 | |||
|association_with_transcript=57bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end | |||
|description=CAGE_peak_7_at_Agap2_5end | |||
|id=chr10:126516020..126516021,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.74e-15!23;CL:0000337!6.74e-15!23;CL:0000540!1.27e-10!33;CL:0000047!1.27e-10!33;CL:0000031!1.27e-10!33;CL:0000404!1.27e-10!33;CL:0000393!9.12e-09!39;CL:0000211!9.12e-09!39;CL:0002319!1.84e-08!43;CL:0000221!4.08e-08!44;CL:0000133!4.08e-08!44;CL:0000055!5.85e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.37e-13,23;CL:0000337,1.37e-13,23;CL:0000540,7.14e-09,33;CL:0000047,7.14e-09,33;CL:0000031,7.14e-09,33;CL:0000404,7.14e-09,33;CL:0000393,3.29e-07,39;CL:0000211,3.29e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.78e-30!52;UBERON:0005068!2.78e-30!52;UBERON:0006241!2.78e-30!52;UBERON:0007135!2.78e-30!52;UBERON:0001017!3.34e-30!73;UBERON:0005743!3.34e-30!73;UBERON:0000073!6.12e-29!75;UBERON:0001016!6.12e-29!75;UBERON:0000955!2.00e-27!50;UBERON:0006238!2.00e-27!50;UBERON:0002616!3.08e-26!49;UBERON:0002020!2.89e-25!34;UBERON:0003080!8.59e-23!40;UBERON:0002346!1.87e-22!71;UBERON:0003075!1.87e-22!71;UBERON:0007284!1.87e-22!71;UBERON:0000033!2.92e-22!63;UBERON:0002780!6.76e-22!39;UBERON:0001890!6.76e-22!39;UBERON:0006240!6.76e-22!39;UBERON:0002791!1.71e-20!29;UBERON:0003528!1.71e-20!29;UBERON:0001893!1.71e-20!29;UBERON:0004121!2.74e-20!102;UBERON:0000924!2.74e-20!102;UBERON:0006601!2.74e-20!102;UBERON:0003056!1.09e-18!49;UBERON:0000956!1.87e-16!21;UBERON:0001869!1.87e-16!21;UBERON:0000203!1.87e-16!21;UBERON:0007811!2.19e-13!86;UBERON:0002619!7.58e-13!17;UBERON:0002021!1.06e-12!10;UBERON:0000411!1.06e-12!10;UBERON:0001950!1.06e-12!10;UBERON:0000153!3.89e-11!94;UBERON:0000025!9.16e-09!114;UBERON:0004111!6.41e-08!122;UBERON:0003076!7.76e-08!12;UBERON:0003057!7.76e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.36e-33,34;UBERON:0000073,6.05e-32,54;UBERON:0003528,9.36e-32,29;UBERON:0002791,9.36e-32,29;UBERON:0001893,9.36e-32,29;UBERON:0001017,5.43e-29,73;UBERON:0002780,1.57e-28,39;UBERON:0001890,1.57e-28,39;UBERON:0006240,1.57e-28,39;UBERON:0000955,1.83e-28,47;UBERON:0006238,1.83e-28,47;UBERON:0001016,4.34e-28,75;UBERON:0003080,1.02e-27,40;UBERON:0001049,1.55e-27,52;UBERON:0005068,1.55e-27,52;UBERON:0006241,1.55e-27,52;UBERON:0007135,1.55e-27,52;UBERON:0002616,3.35e-26,46;UBERON:0002021,1.99e-25,10;UBERON:0000411,1.99e-25,10;UBERON:0001950,1.99e-25,10;UBERON:0000956,2.08e-23,21;UBERON:0001869,2.08e-23,21;UBERON:0000203,2.08e-23,21;UBERON:0003056,7.11e-22,49;UBERON:0002346,1.58e-21,64;UBERON:0003075,1.58e-21,64;UBERON:0007284,1.58e-21,64;UBERON:0002619,2.40e-21,17;UBERON:0004121,3.83e-21,95;UBERON:0000924,3.83e-21,95;UBERON:0006601,3.83e-21,95;UBERON:0010371,2.59e-18,73;UBERON:0010314,1.39e-13,92;UBERON:0000025,4.51e-10,114;UBERON:0000369,9.63e-10,5;UBERON:0002435,9.63e-10,5;UBERON:0000204,9.63e-10,5;UBERON:0010082,9.63e-10,5;UBERON:0002420,2.85e-09,8;UBERON:0007245,2.85e-09,8;UBERON:0010009,2.85e-09,8;UBERON:0010011,2.85e-09,8;UBERON:0000454,2.85e-09,8;UBERON:0004111,4.15e-09,122;UBERON:0011216,9.78e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.675029691658453,0.420649922702764,0.856952953211411,1.10434270475807,0,1.15014565221884,0.919218786610021,0,2.42605942361857,3.22573719838111,1.05509030184155,0.914876436024097,2.08365348222704,0,0,2.13917546887534,0.589257170947335,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,1.46612694769419,0,0,0,0,0.898743836428936,1.37250180845588,1.38219787324151,1.91206752211504,2.55715457330331,2.28566849015516,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,4.41608891984667,0.92614151141356,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,3.53453448063988,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,3.3885110557024,4.60325236507177,5.15605962095457,7.38968684077857,1.37016503954128,3.0215755895588,1.35004500046361,2.2516060161211,0.906284817968409,3.10656187051092,0,0,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0,0.468207537349412,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p7@Agap2 | |||
}} |
Revision as of 15:58, 12 September 2013
Short description: | p7@Agap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Agap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 57bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end |
EntrezGene: | Agap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.37e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.37e-13 | 23 |
neuron | 7.14e-09 | 33 |
neuronal stem cell | 7.14e-09 | 33 |
neuroblast | 7.14e-09 | 33 |
electrically signaling cell | 7.14e-09 | 33 |
electrically responsive cell | 3.29e-07 | 39 |
electrically active cell | 3.29e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.