FFCP PHASE1:Mm9::chr10:126415498..126415501,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=451|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126415498..126415501,-|id=chr10:126415498..126415501,-|ontology_enrichment_celltype=CL:0002563!3.12e-07!9;CL:0002251!3.12e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-16,25;CL:0002563,2.79e-15,9;CL:0002251,2.79e-15,9;CL:0002076,8.28e-15,15;CL:0000223,2.30e-12,20;CL:0000075,2.49e-12,7;CL:0000239,2.92e-11,6;CL:0000677,2.92e-11,6;CL:0000584,2.92e-11,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!5.67e-08!11;UBERON:0003350!3.12e-07!9;UBERON:0004808!3.12e-07!9;UBERON:0001277!3.12e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.79e-15,9;UBERON:0004808,2.79e-15,9;UBERON:0001277,2.79e-15,9;UBERON:0000485,1.22e-14,11;UBERON:0001242,2.45e-14,13;UBERON:0001262,2.45e-14,13;UBERON:0004786,2.45e-14,13;UBERON:0000344,4.98e-12,15;UBERON:0004923,1.18e-07,24|phase1_expression=0.960893082628764,20.5895490507223,10.0099832665698,13.9133537201142,20.5367249278002,3.86122325397347,3.27057696833736,0.903863264091034,0.985521055061667,1.17032263160997,0,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0.319984845586813,0.22940928106717,7.46501553349526,2.15380998079537,4.30942465371778,0.570070258369122,0,1.10865255327652,1.90509202037889,3.07532393792285,0,3.46621943701529,1.16364251750945,10.0042984568561,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,3.02152363141385,2.43304634926835,4.22157529971868,1.56478268869608,0.436050312760893,0.878744730937887,0.58328969722285,0.279972843250725,0,0,0.725362142011344,0,0,0.286533439938757,1.03134418455488,0,0,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,1.53687322128622,0.311068836925433,0.270011876663381,0,0.856952953211411,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0.131886287730194,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0.151143120213571,17.6817338108023,0,0,0,0,0.448026887097336,0,2.38602451609281,2.33807404142582,2.47337702157238,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0.125666591329675,0.988779870937496,0.578397427679647,0,0.647067399789637,0.883366073841574,0,0,0,1.46612694769419,0,0.239630249011841,0.599902730993408,0.508280908292259,0.299581278809645,0.915001205637253,0.376963056338593,0.347648640384553,0.255715457330331,0.41557608911912,0.811206315338788,1.52759045775474,0.497627882440372,0.252722758433675,0,0.260240885925407,0.919608417733892,1.44049703844279,0.60281927134286,1.36072998302656,0.768682321709099,0.937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,1.05570674498369,0.43839146485515,1.66828349535359,0.696504333044333,0.823128545631774,1.19420560091096,0,1.02939162845886,0.568326998791185,0.414251545071004,0,0.540186184383045,0,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0.402619256281115,0.630869845692382,0.720332286654991,2.31293148088659,2.11560453330835,0.639864751605702,0.928946687441754,0.515469845288373,0.605050573870028,0.22237804384487,0.760902504450237,0.949058123089023,0.658795818896044,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0.864552199498777,0.796565093017469,1.13800740571849,0.114248512609729,0,0.407302655690628,0.581857461502877,0.49095073923223,0.442655759869801,0.147610147979602,0.941992367048249,0.370191491765402,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.469380496577004,0.670025029767263,1.6663054862021,1.17080188714679,0.315270288212382,0.8858587585951,0.159454768657487,0.81931657357869,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.275936746304732,0,0,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0.955875191810208,0,0.283076530788832,0.404810701674894,0,0.790575555893047,0.321321316421807,0.283880170416537,1.6025904330053,1.14020871547503,0.824850614862677,0,0.728341908464944,1.51161778482376,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.857348140126369,0.177340233642274,0,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.49465875882444,0.645857706783622,0.542816324353403,0,0.492422699235184,0,0.556275906031529,0.170870880797853,1.23832120777933,0.740778109478847,0.376736914009382,0,0,1.35982743995084,1.95932033253121,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0.826534557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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=451 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126415498..126415501,- | |||
|id=chr10:126415498..126415501,- | |||
|ontology_enrichment_celltype=CL:0002563!3.12e-07!9;CL:0002251!3.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-16,25;CL:0002563,2.79e-15,9;CL:0002251,2.79e-15,9;CL:0002076,8.28e-15,15;CL:0000223,2.30e-12,20;CL:0000075,2.49e-12,7;CL:0000239,2.92e-11,6;CL:0000677,2.92e-11,6;CL:0000584,2.92e-11,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!5.67e-08!11;UBERON:0003350!3.12e-07!9;UBERON:0004808!3.12e-07!9;UBERON:0001277!3.12e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.79e-15,9;UBERON:0004808,2.79e-15,9;UBERON:0001277,2.79e-15,9;UBERON:0000485,1.22e-14,11;UBERON:0001242,2.45e-14,13;UBERON:0001262,2.45e-14,13;UBERON:0004786,2.45e-14,13;UBERON:0000344,4.98e-12,15;UBERON:0004923,1.18e-07,24 | |||
|phase1_expression=0.960893082628764,20.5895490507223,10.0099832665698,13.9133537201142,20.5367249278002,3.86122325397347,3.27057696833736,0.903863264091034,0.985521055061667,1.17032263160997,0,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0.319984845586813,0.22940928106717,7.46501553349526,2.15380998079537,4.30942465371778,0.570070258369122,0,1.10865255327652,1.90509202037889,3.07532393792285,0,3.46621943701529,1.16364251750945,10.0042984568561,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,3.02152363141385,2.43304634926835,4.22157529971868,1.56478268869608,0.436050312760893,0.878744730937887,0.58328969722285,0.279972843250725,0,0,0.725362142011344,0,0,0.286533439938757,1.03134418455488,0,0,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,1.53687322128622,0.311068836925433,0.270011876663381,0,0.856952953211411,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0.131886287730194,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0.151143120213571,17.6817338108023,0,0,0,0,0.448026887097336,0,2.38602451609281,2.33807404142582,2.47337702157238,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0.125666591329675,0.988779870937496,0.578397427679647,0,0.647067399789637,0.883366073841574,0,0,0,1.46612694769419,0,0.239630249011841,0.599902730993408,0.508280908292259,0.299581278809645,0.915001205637253,0.376963056338593,0.347648640384553,0.255715457330331,0.41557608911912,0.811206315338788,1.52759045775474,0.497627882440372,0.252722758433675,0,0.260240885925407,0.919608417733892,1.44049703844279,0.60281927134286,1.36072998302656,0.768682321709099,0.937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,1.05570674498369,0.43839146485515,1.66828349535359,0.696504333044333,0.823128545631774,1.19420560091096,0,1.02939162845886,0.568326998791185,0.414251545071004,0,0.540186184383045,0,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0.402619256281115,0.630869845692382,0.720332286654991,2.31293148088659,2.11560453330835,0.639864751605702,0.928946687441754,0.515469845288373,0.605050573870028,0.22237804384487,0.760902504450237,0.949058123089023,0.658795818896044,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0.864552199498777,0.796565093017469,1.13800740571849,0.114248512609729,0,0.407302655690628,0.581857461502877,0.49095073923223,0.442655759869801,0.147610147979602,0.941992367048249,0.370191491765402,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.469380496577004,0.670025029767263,1.6663054862021,1.17080188714679,0.315270288212382,0.8858587585951,0.159454768657487,0.81931657357869,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0.275936746304732,0,0,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0.955875191810208,0,0.283076530788832,0.404810701674894,0,0.790575555893047,0.321321316421807,0.283880170416537,1.6025904330053,1.14020871547503,0.824850614862677,0,0.728341908464944,1.51161778482376,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.857348140126369,0.177340233642274,0,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.49465875882444,0.645857706783622,0.542816324353403,0,0.492422699235184,0,0.556275906031529,0.170870880797853,1.23832120777933,0.740778109478847,0.376736914009382,0,0,1.35982743995084,1.95932033253121,0.414599921413271,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0.826534557253359,0.523511883968059,1.55537967950151,0.621339313086926,0,0.747582730219894,0.330916980914195,0.777804753376191,0.904118764344118,1.01373675294467,0.469428954583016,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.584384510907845,0.226730383615211,0.443971906748129,0.179427713218951,0.335769232728157,0.386379188064381,0.750729901804728,1.09890974560359,0.428736758158132,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,3.42541259885321,2.2661816921691,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.207574695168353,0,0.512200817262403,1.21553358534147,0,0.183843508450014,0,0.824140228955577,0.962757628775446,0.252697211763798,0.25347929989024,0.37725268277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| |||
|short_description=p@chr10:126415498..126415501,- | |||
}} |
Revision as of 15:58, 12 September 2013
Short description: | p@chr10:126415498..126415501, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126415498..126415501, - |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-16 | 25 |
intestinal epithelial cell | 2.79e-15 | 9 |
epithelial cell of alimentary canal | 2.79e-15 | 9 |
endo-epithelial cell | 8.28e-15 | 15 |
endodermal cell | 2.30e-12 | 20 |
columnar/cuboidal epithelial cell | 2.49e-12 | 7 |
brush border epithelial cell | 2.92e-11 | 6 |
gut absorptive cell | 2.92e-11 | 6 |
enterocyte | 2.92e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.79e-15 | 9 |
gastrointestinal system epithelium | 2.79e-15 | 9 |
intestinal epithelium | 2.79e-15 | 9 |
simple columnar epithelium | 1.22e-14 | 11 |
intestinal mucosa | 2.45e-14 | 13 |
wall of intestine | 2.45e-14 | 13 |
gastrointestinal system mucosa | 2.45e-14 | 13 |
mucosa | 4.98e-12 | 15 |
organ component layer | 1.18e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.