FFCP PHASE1:Hg19::chr2:182322766..182322767,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3676|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6140|TSSclassifier=S|UniProt=|association_with_transcript=-200bp_to_ENST00000478440_5end|coexpression_cluster_id=C4156|description=CAGE_peak_22_at_ITGA4_5end|id=chr2:182322766..182322767,+|ontology_enrichment_celltype=CL:0000037!7.30e-20!172;CL:0000566!7.30e-20!172;CL:0000791!1.73e-19!18;CL:0000789!1.73e-19!18;CL:0002420!1.73e-19!18;CL:0002419!1.73e-19!18;CL:0000790!1.73e-19!18;CL:0000988!5.04e-18!182;CL:0000084!3.58e-17!25;CL:0000827!3.58e-17!25;CL:0002032!6.76e-17!165;CL:0000837!6.76e-17!165;CL:0000625!4.21e-16!11;CL:0000838!4.46e-13!52;CL:0000542!1.00e-12!53;CL:0000051!1.00e-12!53;CL:0002031!6.70e-12!124;CL:0002087!1.05e-11!119;CL:0000738!5.69e-11!140;CL:0000842!3.71e-07!3|ontology_enrichment_celltype_v019=CL:0000764;5.24e-29;2!CL:0000558;5.24e-29;2!CL:0000037;9.28e-16;1!CL:0001024;9.28e-16;1!CL:0002032;2.06e-15;1!CL:0000557;2.06e-15;1|ontology_enrichment_celltype_v019_2=CL:0000764,8.07e-29,2;CL:0000765,8.07e-29,2;CL:0000050,8.07e-29,2;CL:0000038,8.07e-29,2;CL:0000558,8.07e-29,2;CL:0000547,8.07e-29,2;CL:0000549,8.07e-29,2;CL:0000550,8.07e-29,2;CL:0000552,8.07e-29,2;CL:0001024,9.99e-16,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8552;6.93e-16;1!DOID:8692;4.39e-07;31|ontology_enrichment_disease_v019_2=DOID:8552,7.46e-16,1;DOID:8692,9.03e-08,31|ontology_enrichment_uberon=UBERON:0004177!3.98e-10!7;UBERON:0002390!2.43e-07!102;UBERON:0003061!2.43e-07!102;UBERON:0002106!9.05e-07!3;UBERON:0004854!9.05e-07!3;UBERON:0009034!9.05e-07!3;UBERON:0002095!9.05e-07!3;UBERON:0004782!9.05e-07!3;UBERON:0003281!9.05e-07!3;UBERON:0009664!9.05e-07!3;UBERON:0002296!9.05e-07!3;UBERON:0005602!9.05e-07!3;UBERON:0001179!9.05e-07!3;UBERON:0006293!9.05e-07!3|ontology_enrichment_uberon_v019=UBERON:0001905;2.31e-08;2!UBERON:0002757;2.31e-08;2!UBERON:0010134;2.31e-08;2!UBERON:0005408;2.31e-08;2!UBERON:0001899;2.31e-08;2!UBERON:0001474;1.10e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.48e-08,2;UBERON:0002757,2.48e-08,2;UBERON:0010134,2.48e-08,2;UBERON:0005408,2.48e-08,2;UBERON:0001899,2.48e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,2.05520307534393,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,1.05353633910031,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.895906278080929,1.24930726552346,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0,0,1.00726411300178,0.742585499285292,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,2.43410110628385,0,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,3.15802195610297,0,0,0,0,3.97341447450947,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-200bp_to_ENST00000478440_5end | |||
|coexpression_cluster_id=C4156 | |||
|description=CAGE_peak_22_at_ITGA4_5end | |||
|id=chr2:182322766..182322767,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.30e-20!172;CL:0000566!7.30e-20!172;CL:0000791!1.73e-19!18;CL:0000789!1.73e-19!18;CL:0002420!1.73e-19!18;CL:0002419!1.73e-19!18;CL:0000790!1.73e-19!18;CL:0000988!5.04e-18!182;CL:0000084!3.58e-17!25;CL:0000827!3.58e-17!25;CL:0002032!6.76e-17!165;CL:0000837!6.76e-17!165;CL:0000625!4.21e-16!11;CL:0000838!4.46e-13!52;CL:0000542!1.00e-12!53;CL:0000051!1.00e-12!53;CL:0002031!6.70e-12!124;CL:0002087!1.05e-11!119;CL:0000738!5.69e-11!140;CL:0000842!3.71e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.24e-29;2!CL:0000558;5.24e-29;2!CL:0000037;9.28e-16;1!CL:0001024;9.28e-16;1!CL:0002032;2.06e-15;1!CL:0000557;2.06e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.07e-29,2;CL:0000765,8.07e-29,2;CL:0000050,8.07e-29,2;CL:0000038,8.07e-29,2;CL:0000558,8.07e-29,2;CL:0000547,8.07e-29,2;CL:0000549,8.07e-29,2;CL:0000550,8.07e-29,2;CL:0000552,8.07e-29,2;CL:0001024,9.99e-16,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;6.93e-16;1!DOID:8692;4.39e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,7.46e-16,1;DOID:8692,9.03e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.98e-10!7;UBERON:0002390!2.43e-07!102;UBERON:0003061!2.43e-07!102;UBERON:0002106!9.05e-07!3;UBERON:0004854!9.05e-07!3;UBERON:0009034!9.05e-07!3;UBERON:0002095!9.05e-07!3;UBERON:0004782!9.05e-07!3;UBERON:0003281!9.05e-07!3;UBERON:0009664!9.05e-07!3;UBERON:0002296!9.05e-07!3;UBERON:0005602!9.05e-07!3;UBERON:0001179!9.05e-07!3;UBERON:0006293!9.05e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.31e-08;2!UBERON:0002757;2.31e-08;2!UBERON:0010134;2.31e-08;2!UBERON:0005408;2.31e-08;2!UBERON:0001899;2.31e-08;2!UBERON:0001474;1.10e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.48e-08,2;UBERON:0002757,2.48e-08,2;UBERON:0010134,2.48e-08,2;UBERON:0005408,2.48e-08,2;UBERON:0001899,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,2.05520307534393,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,1.05353633910031,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.895906278080929,1.24930726552346,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0,0,1.00726411300178,0.742585499285292,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,2.43410110628385,0,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,3.15802195610297,0,0,0,0,3.97341447450947,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p22@ITGA4 | |||
}} |
Revision as of 15:29, 12 September 2013
Short description: | p22@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_ITGA4_5end |
Coexpression cluster: | C4156_acute_chronic_Reticulocytes_thymus_CD4_CD34_CD8 |
Association with transcript: | -200bp_to_ENST00000478440_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.07e-29 | 2 |
erythroblast | 8.07e-29 | 2 |
megakaryocyte-erythroid progenitor cell | 8.07e-29 | 2 |
erythroid progenitor cell | 8.07e-29 | 2 |
reticulocyte | 8.07e-29 | 2 |
proerythroblast | 8.07e-29 | 2 |
basophilic erythroblast | 8.07e-29 | 2 |
polychromatophilic erythroblast | 8.07e-29 | 2 |
orthochromatic erythroblast | 8.07e-29 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.99e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.48e-08 | 2 |
regional part of epithalamus | 2.48e-08 | 2 |
secretory circumventricular organ | 2.48e-08 | 2 |
circumventricular organ | 2.48e-08 | 2 |
epithalamus | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 7.46e-16 | 1 |
myeloid leukemia | 9.03e-08 | 31 |
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