FFCP PHASE1:Hg19::chr2:158114174..158114187,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11227|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4127|TSSclassifier=S|UniProt=Q7Z7M9|association_with_transcript=64bp_to_ENST00000259056_5end|coexpression_cluster_id=C1496|description=CAGE_peak_6_at_GALNT5_5end|id=chr2:158114174..158114187,+|ontology_enrichment_celltype=CL:0000055!1.10e-23!180;CL:0000057!9.25e-16!75;CL:0000680!1.79e-12!57;CL:0000056!1.79e-12!57;CL:0000355!1.79e-12!57;CL:0002620!5.45e-11!23;CL:0000192!6.38e-11!42;CL:0000514!6.38e-11!42;CL:0000187!1.02e-10!54;CL:0000359!2.24e-09!32;CL:0000183!8.35e-09!59;CL:0000393!1.81e-08!60;CL:0000211!1.81e-08!60;CL:0002371!7.05e-08!591|ontology_enrichment_celltype_v019=CL:0002620;1.03e-14;23!CL:0000056;1.90e-07;4|ontology_enrichment_celltype_v019_2=CL:0000057,4.13e-17,76;CL:0002620,6.71e-15,23;CL:0000515,5.44e-08,4|ontology_enrichment_development_v019=CL:0000515;1.90e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.98e-10;5!DOID:450;1.98e-10;5!DOID:66;1.98e-10;5!DOID:423;1.98e-10;5!DOID:0080000;1.98e-10;5!DOID:11722;1.98e-10;5|ontology_enrichment_disease_v019_2=DOID:17,1.47e-10,5;DOID:450,1.47e-10,5;DOID:66,1.47e-10,5;DOID:423,1.47e-10,5;DOID:0080000,1.47e-10,5;DOID:11722,1.47e-10,5|ontology_enrichment_uberon=UBERON:0000914!1.16e-16!83;UBERON:0002329!1.16e-16!83;UBERON:0003077!1.16e-16!83;UBERON:0003059!1.16e-16!83;UBERON:0007282!1.16e-16!83;UBERON:0009618!1.16e-16!83;UBERON:0007285!1.16e-16!83;UBERON:0003102!2.67e-14!95;UBERON:0000486!2.22e-13!82;UBERON:0004290!7.70e-12!70;UBERON:0001134!1.36e-11!61;UBERON:0002036!1.36e-11!61;UBERON:0003082!1.36e-11!61;UBERON:0000475!1.76e-11!365;UBERON:0002385!2.48e-11!63;UBERON:0001015!2.48e-11!63;UBERON:0000383!2.48e-11!63;UBERON:0002097!1.56e-09!40;UBERON:0005256!2.01e-09!143;UBERON:0002199!7.17e-09!45;UBERON:0002416!7.17e-09!45;UBERON:0000481!1.97e-08!347;UBERON:0001828!6.73e-07!8;UBERON:0002100!7.18e-07!216|ontology_enrichment_uberon_v019=UBERON:0002097;9.53e-12;41!UBERON:0002199;6.25e-09;46!UBERON:0002416;6.25e-09;46!UBERON:0000075;2.00e-08;16!UBERON:0004905;4.49e-08;8!UBERON:0000982;4.49e-08;8!UBERON:0004770;4.49e-08;8!UBERON:0001828;1.41e-07;8!UBERON:0001434;7.69e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.44e-15,41;UBERON:0003102,1.34e-13,99;UBERON:0002199,1.59e-12,46;UBERON:0002416,1.59e-12,46;UBERON:0000075,2.89e-08,16;UBERON:0001828,5.04e-08,8;UBERON:0004905,7.91e-08,8;UBERON:0000982,7.91e-08,8;UBERON:0004770,7.91e-08,8|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0.697801167972428,0,0,1.11389717664042,2.65117900582333,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,0.123121058076788,0.204000691244253,0,0.572471974262113,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,0,1.15877215168659,0.795285947051099,1.45990461090791,0.0945348171640679,0,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,11.2547803691236,2.0078563452417,0,1.68203280042692,1.06748995729705,0.74000264525148,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0.117434498643765,0,0,1.63323337003915,0.61417158655884,1.44656093646072,1.18800285728205,1.48360157567134,0,0,0.168336113954066,0,0.831192346452549,3.95079858792754,2.14541457059314,2.70428506031874,0.113432183160021,3.22901344239952,1.70845911054854,1.27159140695737,9.60291507470087,4.12210116953756,5.41045134095821,2.04728541964749,9.45147460551091,2.14361411354637,4.54380793639406,1.47279837827679,0.969876340912871,7.4552014428489,3.92933183087797,0.67824236924195,0.966304265816484,1.90922284413584,1.72082757233402,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,1.39310378409594,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0.109750285408626,0,0,0.370353780634118,0,0,0,0,2.34817388471643,0,0,0,0,0,0,0,0,0.93733833986777,2.35174979478403,1.27597587518148,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,1.73737568001095,1.64381058040307,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,1.62759014219841,1.45579603071565,1.07057393278297,1.10391690523754,0.937131319941706,0.902838299183157,2.27407504055985,0,1.32845119707087,1.29058417979192,1.65078867489357,0,0,0,0,0,0,0,0,0,6.1384789315225,1.68396056659844,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.710246901252508,0.0821271560138091,0.519254429183621,1.16210378459959,0,0.40101294060657,1.01289087829486,0.229628896329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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z7M9 | |||
|association_with_transcript=64bp_to_ENST00000259056_5end | |||
|coexpression_cluster_id=C1496 | |||
|description=CAGE_peak_6_at_GALNT5_5end | |||
|id=chr2:158114174..158114187,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-23!180;CL:0000057!9.25e-16!75;CL:0000680!1.79e-12!57;CL:0000056!1.79e-12!57;CL:0000355!1.79e-12!57;CL:0002620!5.45e-11!23;CL:0000192!6.38e-11!42;CL:0000514!6.38e-11!42;CL:0000187!1.02e-10!54;CL:0000359!2.24e-09!32;CL:0000183!8.35e-09!59;CL:0000393!1.81e-08!60;CL:0000211!1.81e-08!60;CL:0002371!7.05e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.03e-14;23!CL:0000056;1.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.13e-17,76;CL:0002620,6.71e-15,23;CL:0000515,5.44e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.90e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.98e-10;5!DOID:450;1.98e-10;5!DOID:66;1.98e-10;5!DOID:423;1.98e-10;5!DOID:0080000;1.98e-10;5!DOID:11722;1.98e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.47e-10,5;DOID:450,1.47e-10,5;DOID:66,1.47e-10,5;DOID:423,1.47e-10,5;DOID:0080000,1.47e-10,5;DOID:11722,1.47e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-16!83;UBERON:0002329!1.16e-16!83;UBERON:0003077!1.16e-16!83;UBERON:0003059!1.16e-16!83;UBERON:0007282!1.16e-16!83;UBERON:0009618!1.16e-16!83;UBERON:0007285!1.16e-16!83;UBERON:0003102!2.67e-14!95;UBERON:0000486!2.22e-13!82;UBERON:0004290!7.70e-12!70;UBERON:0001134!1.36e-11!61;UBERON:0002036!1.36e-11!61;UBERON:0003082!1.36e-11!61;UBERON:0000475!1.76e-11!365;UBERON:0002385!2.48e-11!63;UBERON:0001015!2.48e-11!63;UBERON:0000383!2.48e-11!63;UBERON:0002097!1.56e-09!40;UBERON:0005256!2.01e-09!143;UBERON:0002199!7.17e-09!45;UBERON:0002416!7.17e-09!45;UBERON:0000481!1.97e-08!347;UBERON:0001828!6.73e-07!8;UBERON:0002100!7.18e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.53e-12;41!UBERON:0002199;6.25e-09;46!UBERON:0002416;6.25e-09;46!UBERON:0000075;2.00e-08;16!UBERON:0004905;4.49e-08;8!UBERON:0000982;4.49e-08;8!UBERON:0004770;4.49e-08;8!UBERON:0001828;1.41e-07;8!UBERON:0001434;7.69e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.44e-15,41;UBERON:0003102,1.34e-13,99;UBERON:0002199,1.59e-12,46;UBERON:0002416,1.59e-12,46;UBERON:0000075,2.89e-08,16;UBERON:0001828,5.04e-08,8;UBERON:0004905,7.91e-08,8;UBERON:0000982,7.91e-08,8;UBERON:0004770,7.91e-08,8 | |||
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| |||
|short_description=p6@GALNT5 | |||
}} |
Revision as of 14:13, 12 September 2013
Short description: | p6@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_GALNT5_5end |
Coexpression cluster: | C1496_Fibroblast_Smooth_papillotubular_basal_liposarcoma_tenocyte_mesenchymal |
Association with transcript: | 64bp_to_ENST00000259056_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.13e-17 | 76 |
skin fibroblast | 6.71e-15 | 23 |
skeletal muscle myoblast | 5.44e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.44e-15 | 41 |
surface structure | 1.34e-13 | 99 |
integument | 1.59e-12 | 46 |
integumental system | 1.59e-12 | 46 |
subdivision of skeletal system | 2.89e-08 | 16 |
gingiva | 5.04e-08 | 8 |
articulation | 7.91e-08 | 8 |
skeletal joint | 7.91e-08 | 8 |
articular system | 7.91e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.47e-10 | 5 |
myotonic disease | 1.47e-10 | 5 |
muscle tissue disease | 1.47e-10 | 5 |
myopathy | 1.47e-10 | 5 |
muscular disease | 1.47e-10 | 5 |
myotonic dystrophy | 1.47e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.