FFCP PHASE1:Hg19::chr2:139538247..139538266,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11249|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8076|TSSclassifier=S|UniProt=O95156|association_with_transcript=-329bp_to_ENST00000272641_5end|coexpression_cluster_id=C1263|description=CAGE_peak_5_at_NXPH2_5end|id=chr2:139538247..139538266,-|ontology_enrichment_celltype=CL:0000077!8.06e-07!19|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;3.67e-23;1!UBERON:0006238;4.34e-09;10!UBERON:0003056;1.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3093;2.09e-08;11|ontology_enrichment_disease_v019_2=DOID:3093,2.05e-08,11|ontology_enrichment_uberon=UBERON:0005743!3.26e-22!86;UBERON:0001017!5.68e-22!82;UBERON:0000073!3.98e-21!94;UBERON:0001016!3.98e-21!94;UBERON:0001049!7.84e-21!57;UBERON:0005068!7.84e-21!57;UBERON:0006241!7.84e-21!57;UBERON:0007135!7.84e-21!57;UBERON:0002346!1.44e-19!90;UBERON:0003075!4.83e-19!86;UBERON:0007284!4.83e-19!86;UBERON:0000955!1.11e-17!69;UBERON:0006238!1.11e-17!69;UBERON:0002020!1.82e-17!34;UBERON:0003528!1.82e-17!34;UBERON:0001869!2.75e-16!32;UBERON:0002616!3.56e-16!59;UBERON:0001893!3.81e-15!34;UBERON:0001950!7.49e-15!20;UBERON:0002780!5.70e-14!41;UBERON:0001890!5.70e-14!41;UBERON:0006240!5.70e-14!41;UBERON:0000956!1.08e-13!25;UBERON:0000203!1.08e-13!25;UBERON:0007023!1.12e-13!115;UBERON:0003080!1.49e-13!42;UBERON:0000924!1.53e-13!173;UBERON:0006601!1.53e-13!173;UBERON:0002791!1.65e-13!33;UBERON:0002619!2.40e-13!22;UBERON:0004121!5.45e-13!169;UBERON:0003056!1.26e-10!61;UBERON:0000988!4.34e-10!3;UBERON:0000033!4.50e-10!123;UBERON:0001872!1.16e-09!5;UBERON:0000153!2.57e-09!129;UBERON:0007811!2.57e-09!129;UBERON:0002298!3.49e-09!8;UBERON:0003076!7.76e-09!15;UBERON:0003057!7.76e-09!15;UBERON:0004732!7.31e-08!13;UBERON:0002148!5.02e-07!2;UBERON:0009662!5.02e-07!2|ontology_enrichment_uberon_v019=UBERON:0000988;2.30e-30;3!UBERON:0000941;3.67e-23;1!UBERON:0001785;3.67e-23;1!UBERON:0002464;3.67e-23;1!UBERON:0004904;3.67e-23;1!UBERON:0001021;3.67e-23;1!UBERON:0004732;6.16e-16;13!UBERON:0002298;9.74e-16;6!UBERON:0001905;2.74e-12;2!UBERON:0002148;2.74e-12;2!UBERON:0003714;2.74e-12;2!UBERON:0005162;2.74e-12;2!UBERON:0000122;2.74e-12;2!UBERON:0002757;2.74e-12;2!UBERON:0010134;2.74e-12;2!UBERON:0006331;2.74e-12;2!UBERON:0009662;2.74e-12;2!UBERON:0005408;2.74e-12;2!UBERON:0001899;2.74e-12;2!UBERON:0002680;7.96e-11;9!UBERON:0001895;7.96e-11;9!UBERON:0004733;2.37e-08;12!UBERON:0002028;2.37e-08;12!UBERON:0002346;8.85e-07;4!UBERON:0003296;8.85e-07;4!UBERON:0010133;8.85e-07;4!UBERON:0000923;8.85e-07;4!UBERON:0010316;8.85e-07;4!UBERON:0002784;8.85e-07;4!UBERON:0005291;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.67e-30,3;UBERON:0000941,2.10e-23,1;UBERON:0001785,2.10e-23,1;UBERON:0002464,2.10e-23,1;UBERON:0004904,2.10e-23,1;UBERON:0001021,2.10e-23,1;UBERON:0003902,2.10e-23,1;UBERON:0005425,2.10e-23,1;UBERON:0004732,5.71e-16,13;UBERON:0002298,1.05e-15,6;UBERON:0003714,2.07e-12,2;UBERON:0005162,2.07e-12,2;UBERON:0000122,2.07e-12,2;UBERON:0002148,2.90e-12,2;UBERON:0006331,2.90e-12,2;UBERON:0009662,2.90e-12,2;UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0001016,1.22e-11,89;UBERON:0000955,2.31e-11,68;UBERON:0006238,2.31e-11,68;UBERON:0002680,8.37e-11,9;UBERON:0001895,8.37e-11,9;UBERON:0010092,8.37e-11,9;UBERON:0001017,1.41e-09,81;UBERON:0002346,4.20e-09,86;UBERON:0004733,2.46e-08,12;UBERON:0002028,2.46e-08,12;UBERON:0007277,2.46e-08,12;UBERON:0004121,6.83e-08,171;UBERON:0000924,6.83e-08,171;UBERON:0006601,6.83e-08,171;UBERON:0000073,6.94e-07,53;UBERON:0002616,6.94e-07,53;UBERON:0003076,7.63e-07,15;UBERON:0003057,7.63e-07,15;UBERON:0001781,7.70e-07,4;UBERON:0003075,8.84e-07,82;UBERON:0007284,8.84e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8076 | |||
|TSSclassifier=S | |||
|UniProt=O95156 | |||
|association_with_transcript=-329bp_to_ENST00000272641_5end | |||
|coexpression_cluster_id=C1263 | |||
|description=CAGE_peak_5_at_NXPH2_5end | |||
|id=chr2:139538247..139538266,- | |||
|ontology_enrichment_celltype=CL:0000077!8.06e-07!19 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.67e-23;1!UBERON:0006238;4.34e-09;10!UBERON:0003056;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.09e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.05e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0005743!3.26e-22!86;UBERON:0001017!5.68e-22!82;UBERON:0000073!3.98e-21!94;UBERON:0001016!3.98e-21!94;UBERON:0001049!7.84e-21!57;UBERON:0005068!7.84e-21!57;UBERON:0006241!7.84e-21!57;UBERON:0007135!7.84e-21!57;UBERON:0002346!1.44e-19!90;UBERON:0003075!4.83e-19!86;UBERON:0007284!4.83e-19!86;UBERON:0000955!1.11e-17!69;UBERON:0006238!1.11e-17!69;UBERON:0002020!1.82e-17!34;UBERON:0003528!1.82e-17!34;UBERON:0001869!2.75e-16!32;UBERON:0002616!3.56e-16!59;UBERON:0001893!3.81e-15!34;UBERON:0001950!7.49e-15!20;UBERON:0002780!5.70e-14!41;UBERON:0001890!5.70e-14!41;UBERON:0006240!5.70e-14!41;UBERON:0000956!1.08e-13!25;UBERON:0000203!1.08e-13!25;UBERON:0007023!1.12e-13!115;UBERON:0003080!1.49e-13!42;UBERON:0000924!1.53e-13!173;UBERON:0006601!1.53e-13!173;UBERON:0002791!1.65e-13!33;UBERON:0002619!2.40e-13!22;UBERON:0004121!5.45e-13!169;UBERON:0003056!1.26e-10!61;UBERON:0000988!4.34e-10!3;UBERON:0000033!4.50e-10!123;UBERON:0001872!1.16e-09!5;UBERON:0000153!2.57e-09!129;UBERON:0007811!2.57e-09!129;UBERON:0002298!3.49e-09!8;UBERON:0003076!7.76e-09!15;UBERON:0003057!7.76e-09!15;UBERON:0004732!7.31e-08!13;UBERON:0002148!5.02e-07!2;UBERON:0009662!5.02e-07!2 | |||
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|short_description=p5@NXPH2 | |||
}} |
Revision as of 13:40, 12 September 2013
Short description: | p5@NXPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NXPH2_5end |
Coexpression cluster: | C1263_neuroectodermal_glioblastoma_pons_pineal_parietal_rhabdomyosarcoma_occipital |
Association with transcript: | -329bp_to_ENST00000272641_5end |
EntrezGene: | NXPH2 |
HGNC: | 8076 |
UniProt: | O95156 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.05e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.