FFCP PHASE1:Hg19::chr2:119605056..119605071,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3342|TSSclassifier=S|UniProt=Q05925|association_with_transcript=182bp_to_ENST00000295206_5end|description=CAGE_peak_10_at_EN1_5end|id=chr2:119605056..119605071,-|ontology_enrichment_celltype=CL:0000057!7.89e-27!75;CL:0002620!8.86e-27!23;CL:0000055!3.31e-21!180;CL:0000136!1.72e-18!15;CL:0002334!2.23e-14!12;CL:0000723!8.87e-08!436;CL:0000034!9.19e-08!444;CL:0002615!1.01e-07!3;CL:0000048!1.27e-07!430;CL:0000188!1.28e-07!9;CL:0000219!1.74e-07!390;CL:0000128!3.20e-07!7;CL:0000126!3.20e-07!7;CL:0000127!3.20e-07!7;CL:0002453!3.20e-07!7;CL:0002603!4.16e-07!3;CL:0002580!8.04e-07!3|ontology_enrichment_celltype_v019=CL:0000136;1.34e-29;13!CL:0002615;2.91e-25;3!CL:0002617;1.13e-16;2!CL:0002620;4.19e-12;23!CL:0002603;9.82e-12;3!CL:0000128;5.30e-11;7!CL:0000126;5.30e-11;7!CL:0000127;5.30e-11;7!CL:0002616;1.03e-09;1!CL:0000228;3.39e-09;1!CL:0002372;3.39e-09;1!CL:0002591;3.39e-09;1!CL:0000056;8.54e-09;4!CL:0000095;5.92e-07;17|ontology_enrichment_celltype_v019_2=CL:0000136,2.08e-33,15;CL:0002615,2.37e-25,3;CL:0002617,5.08e-17,2;CL:0002620,4.63e-12,23;CL:0002603,1.16e-11,3;CL:0000128,6.08e-11,7;CL:0000126,6.08e-11,7;CL:0000127,6.08e-11,7;CL:0002453,6.08e-11,7;CL:0002616,1.03e-09,1;CL:0000228,3.53e-09,1;CL:0002372,3.53e-09,1;CL:0002591,4.50e-09,1;CL:0000515,8.54e-09,4;CL:0000095,6.78e-07,17;CL:0000123,6.78e-07,17|ontology_enrichment_development_v019=CL:0000515;8.54e-09;4|ontology_enrichment_disease=DOID:17!3.77e-10!5;DOID:450!3.77e-10!5;DOID:66!3.77e-10!5;DOID:423!3.77e-10!5;DOID:0080000!3.77e-10!5;DOID:11722!3.77e-10!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002199!9.86e-30!45;UBERON:0002416!9.86e-30!45;UBERON:0002097!1.08e-24!40;UBERON:0003688!1.42e-12!6;UBERON:0002358!1.42e-12!6;UBERON:0003684!1.42e-12!6;UBERON:0001178!1.42e-12!6;UBERON:0003102!1.77e-12!95;UBERON:0001013!3.13e-08!14;UBERON:0000475!3.89e-08!365;UBERON:0004457!6.29e-08!12;UBERON:0000042!6.29e-08!12;UBERON:0002067!7.45e-08!9;UBERON:0004016!7.45e-08!9;UBERON:0010083!7.45e-08!9;UBERON:0002072!9.34e-07!5|ontology_enrichment_uberon_v019=UBERON:0004457;1.20e-22;9!UBERON:0000042;1.20e-22;9!UBERON:0003688;4.07e-22;6!UBERON:0002358;4.07e-22;6!UBERON:0003684;4.07e-22;6!UBERON:0001178;4.07e-22;6!UBERON:0000310;1.28e-07;10!UBERON:0002199;1.69e-07;46!UBERON:0002416;1.69e-07;46!UBERON:0001443;5.74e-07;11!UBERON:0003102;6.48e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.56e-22,6;UBERON:0002358,3.56e-22,6;UBERON:0003684,3.56e-22,6;UBERON:0001178,3.56e-22,6;UBERON:0004457,5.03e-17,12;UBERON:0000042,5.03e-17,12;UBERON:0002199,9.35e-13,46;UBERON:0002416,9.35e-13,46;UBERON:0002097,1.97e-11,41;UBERON:0000310,9.82e-08,10;UBERON:0001443,4.51e-07,11|phase1_expression=1.81678379270557,1.71280419112787,1.69145284915165,12.0087958023756,5.81049422755474,4.36169262050184,0,1.89515962028049,0.783556884599516,0,0,0,0,0,0,0,0,0,0,3.0780264519197,1.22400414746552,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.352303495931295,0.809364721840658,1.26405726032024,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,0.89694817844431,1.70845911054854,0.635795703478686,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,3.11798416515836,0.252433774244115,0.184099797284599,2.58633690910099,2.13005755509969,1.0075209822764,0,0,0,0,0.243947412259191,0,0,0,0,0,10.9514672630871,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.68396056659844,0.384417447767103,2.55853624533352,0.160853921143607,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.462145851343933,0.921022048356777,0.964856007391714,0,0.580066775656914,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14650817927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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3342 | |||
|TSSclassifier=S | |||
|UniProt=Q05925 | |||
|association_with_transcript=182bp_to_ENST00000295206_5end | |||
|description=CAGE_peak_10_at_EN1_5end | |||
|id=chr2:119605056..119605071,- | |||
|ontology_enrichment_celltype=CL:0000057!7.89e-27!75;CL:0002620!8.86e-27!23;CL:0000055!3.31e-21!180;CL:0000136!1.72e-18!15;CL:0002334!2.23e-14!12;CL:0000723!8.87e-08!436;CL:0000034!9.19e-08!444;CL:0002615!1.01e-07!3;CL:0000048!1.27e-07!430;CL:0000188!1.28e-07!9;CL:0000219!1.74e-07!390;CL:0000128!3.20e-07!7;CL:0000126!3.20e-07!7;CL:0000127!3.20e-07!7;CL:0002453!3.20e-07!7;CL:0002603!4.16e-07!3;CL:0002580!8.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.34e-29;13!CL:0002615;2.91e-25;3!CL:0002617;1.13e-16;2!CL:0002620;4.19e-12;23!CL:0002603;9.82e-12;3!CL:0000128;5.30e-11;7!CL:0000126;5.30e-11;7!CL:0000127;5.30e-11;7!CL:0002616;1.03e-09;1!CL:0000228;3.39e-09;1!CL:0002372;3.39e-09;1!CL:0002591;3.39e-09;1!CL:0000056;8.54e-09;4!CL:0000095;5.92e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.08e-33,15;CL:0002615,2.37e-25,3;CL:0002617,5.08e-17,2;CL:0002620,4.63e-12,23;CL:0002603,1.16e-11,3;CL:0000128,6.08e-11,7;CL:0000126,6.08e-11,7;CL:0000127,6.08e-11,7;CL:0002453,6.08e-11,7;CL:0002616,1.03e-09,1;CL:0000228,3.53e-09,1;CL:0002372,3.53e-09,1;CL:0002591,4.50e-09,1;CL:0000515,8.54e-09,4;CL:0000095,6.78e-07,17;CL:0000123,6.78e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000515;8.54e-09;4 | |||
|ontology_enrichment_disease=DOID:17!3.77e-10!5;DOID:450!3.77e-10!5;DOID:66!3.77e-10!5;DOID:423!3.77e-10!5;DOID:0080000!3.77e-10!5;DOID:11722!3.77e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!9.86e-30!45;UBERON:0002416!9.86e-30!45;UBERON:0002097!1.08e-24!40;UBERON:0003688!1.42e-12!6;UBERON:0002358!1.42e-12!6;UBERON:0003684!1.42e-12!6;UBERON:0001178!1.42e-12!6;UBERON:0003102!1.77e-12!95;UBERON:0001013!3.13e-08!14;UBERON:0000475!3.89e-08!365;UBERON:0004457!6.29e-08!12;UBERON:0000042!6.29e-08!12;UBERON:0002067!7.45e-08!9;UBERON:0004016!7.45e-08!9;UBERON:0010083!7.45e-08!9;UBERON:0002072!9.34e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.20e-22;9!UBERON:0000042;1.20e-22;9!UBERON:0003688;4.07e-22;6!UBERON:0002358;4.07e-22;6!UBERON:0003684;4.07e-22;6!UBERON:0001178;4.07e-22;6!UBERON:0000310;1.28e-07;10!UBERON:0002199;1.69e-07;46!UBERON:0002416;1.69e-07;46!UBERON:0001443;5.74e-07;11!UBERON:0003102;6.48e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.56e-22,6;UBERON:0002358,3.56e-22,6;UBERON:0003684,3.56e-22,6;UBERON:0001178,3.56e-22,6;UBERON:0004457,5.03e-17,12;UBERON:0000042,5.03e-17,12;UBERON:0002199,9.35e-13,46;UBERON:0002416,9.35e-13,46;UBERON:0002097,1.97e-11,41;UBERON:0000310,9.82e-08,10;UBERON:0001443,4.51e-07,11 | |||
|phase1_expression=1.81678379270557,1.71280419112787,1.69145284915165,12.0087958023756,5.81049422755474,4.36169262050184,0,1.89515962028049,0.783556884599516,0,0,0,0,0,0,0,0,0,0,3.0780264519197,1.22400414746552,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.352303495931295,0.809364721840658,1.26405726032024,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,0.89694817844431,1.70845911054854,0.635795703478686,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,3.11798416515836,0.252433774244115,0.184099797284599,2.58633690910099,2.13005755509969,1.0075209822764,0,0,0,0,0.243947412259191,0,0,0,0,0,10.9514672630871,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.68396056659844,0.384417447767103,2.55853624533352,0.160853921143607,0,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.462145851343933,0.921022048356777,0.964856007391714,0,0.580066775656914,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24991101504741,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,1.01444720027578,0.597019211547496,0.467426619694449,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@EN1 | |||
}} |
Revision as of 13:15, 12 September 2013
Short description: | p10@EN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_EN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 182bp_to_ENST00000295206_5end |
EntrezGene: | EN1 |
HGNC: | 3342 |
UniProt: | Q05925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.08e-33 | 15 |
adipocyte of omentum tissue | 2.37e-25 | 3 |
adipocyte of breast | 5.08e-17 | 2 |
skin fibroblast | 4.63e-12 | 23 |
astrocyte of the cerebellum | 1.16e-11 | 3 |
oligodendrocyte | 6.08e-11 | 7 |
macroglial cell | 6.08e-11 | 7 |
astrocyte | 6.08e-11 | 7 |
oligodendrocyte precursor cell | 6.08e-11 | 7 |
perirenal adipocyte cell | 1.03e-09 | 1 |
multinucleate cell | 3.53e-09 | 1 |
myotube | 3.53e-09 | 1 |
smooth muscle cell of the pulmonary artery | 4.50e-09 | 1 |
skeletal muscle myoblast | 8.54e-09 | 4 |
neuron associated cell | 6.78e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.78e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.56e-22 | 6 |
peritoneum | 3.56e-22 | 6 |
abdominal cavity | 3.56e-22 | 6 |
visceral peritoneum | 3.56e-22 | 6 |
cavity lining | 5.03e-17 | 12 |
serous membrane | 5.03e-17 | 12 |
integument | 9.35e-13 | 46 |
integumental system | 9.35e-13 | 46 |
skin of body | 1.97e-11 | 41 |
breast | 9.82e-08 | 10 |
chest | 4.51e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.