FFCP PHASE1:Hg19::chr2:102721118..102721143,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5993|TSSclassifier=W|UniProt=B8ZZ73|association_with_transcript=89bp_to_ENST00000409329_5end|description=CAGE_peak_4_at_IL1R1_5end|id=chr2:102721118..102721143,+|ontology_enrichment_celltype=CL:0000048!2.22e-21!430;CL:0000055!3.14e-21!180;CL:0000723!6.55e-20!436;CL:0000034!1.28e-18!444;CL:0000057!8.29e-18!75;CL:0002320!1.38e-12!365;CL:0000134!5.77e-12!358;CL:0000680!5.23e-11!57;CL:0000056!5.23e-11!57;CL:0000355!5.23e-11!57;CL:0000187!8.92e-10!54;CL:0002057!1.93e-09!42;CL:0000393!3.55e-09!60;CL:0000211!3.55e-09!60;CL:0002620!3.95e-09!23;CL:0000219!4.00e-09!390;CL:0000183!4.96e-08!59;CL:0000860!6.08e-08!45|ontology_enrichment_celltype_v019=CL:0000860;2.80e-13;33!CL:0002057;2.80e-13;33!CL:0002620;5.05e-10;23!CL:0000473;3.06e-08;39!CL:0000234;3.06e-08;39!CL:0002494;4.93e-07;16|ontology_enrichment_celltype_v019_2=CL:0000048,1.35e-23,427;CL:0000723,1.34e-22,433;CL:0000034,6.28e-22,441;CL:0002320,9.13e-16,361;CL:0000134,3.27e-15,354;CL:0000057,1.25e-14,76;CL:0000860,2.64e-13,42;CL:0002057,2.64e-13,42;CL:0000219,2.94e-11,386;CL:0000473,1.78e-10,48;CL:0000234,1.78e-10,48;CL:0002620,4.14e-10,23;CL:0002009,2.04e-08,61;CL:0000680,6.53e-08,58;CL:0000056,6.53e-08,58;CL:0000355,6.53e-08,58;CL:0002194,3.13e-07,59;CL:0000576,3.13e-07,59;CL:0000040,3.13e-07,59;CL:0000559,3.13e-07,59;CL:0002494,5.78e-07,16;CL:0000557,6.80e-07,67|ontology_enrichment_development_v019=CL:0002057;2.86e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!3.06e-13!167;UBERON:0000914!1.08e-12!83;UBERON:0002329!1.08e-12!83;UBERON:0003077!1.08e-12!83;UBERON:0003059!1.08e-12!83;UBERON:0007282!1.08e-12!83;UBERON:0009618!1.08e-12!83;UBERON:0007285!1.08e-12!83;UBERON:0004290!3.98e-12!70;UBERON:0002384!4.94e-12!375;UBERON:0002385!5.41e-10!63;UBERON:0001015!5.41e-10!63;UBERON:0000383!5.41e-10!63;UBERON:0001134!1.07e-09!61;UBERON:0002036!1.07e-09!61;UBERON:0003082!1.07e-09!61;UBERON:0000486!3.30e-09!82;UBERON:0005256!2.38e-08!143;UBERON:0000926!9.57e-08!448;UBERON:0004120!9.57e-08!448;UBERON:0006603!9.57e-08!448;UBERON:0000479!1.81e-07!787|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.24e-16,371;UBERON:0002204,6.61e-13,167;UBERON:0000926,1.79e-10,315;UBERON:0004120,1.79e-10,315;UBERON:0006603,1.79e-10,315;UBERON:0002329,4.91e-09,71;UBERON:0003059,4.91e-09,71;UBERON:0007282,4.91e-09,71;UBERON:0004290,4.91e-09,71;UBERON:0009618,4.91e-09,71;UBERON:0003077,9.13e-09,72;UBERON:0007285,9.13e-09,72;UBERON:0007524,1.66e-08,73;UBERON:0003081,3.31e-08,203;UBERON:0002371,2.30e-07,76;UBERON:0007503,2.52e-07,78;UBERON:0005256,4.95e-07,122;UBERON:0002097,5.15e-07,41;UBERON:0002199,5.24e-07,46;UBERON:0002416,5.24e-07,46;UBERON:0000486,6.63e-07,83;UBERON:0001134,7.20e-07,62;UBERON:0002036,7.20e-07,62;UBERON:0003082,7.20e-07,62|phase1_expression=1.2717486548939,0.214100523890983,5.77913056793482,1.0007329835313,0,1.74467704820074,0,8.2123583545488,0.522371256399677,0,0,0,0,1.8564952944007,0.662794751455832,2.6893005858071,0,0.730310090387373,0.487932798790507,0.61560529038394,0.204000691244253,0.313454721478088,0.572471974262113,0.410623275218653,0.251085279189606,1.14620108621927,1.64201178899891,0.708397031823113,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0,7.20194031091441,6.81851121398482,8.89744569934992,0,0,0.257575567634187,0.290796477559129,2.26725566213286,0.242584061187816,1.85943229524548,0.822335776043652,4.02618282163635,1.7261543539329,1.5369642391746,3.54723344832878,10.3423704220986,9.03678557017357,2.70852973188684,3.57660445130949,1.36453075028923,2.69668181334102,9.18251677112708,11.5534449747394,20.4587880255693,0.659702600373432,1.39624560335142,0,18.2831820336008,17.0215567407342,28.0270012048009,2.51248665256743,3.12889751052121,4.34377689410233,11.502590550034,25.7794345191295,36.3931745557017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.24203425192614,0,0,0,0.205601498999509,1.00311897234407,0,0,0,5.57052284425868,2.65145316727353,4.65221178625604,1.35401931882508,33.0475604892242,15.4770623596255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.710331756132051,0,0,0,0.144824403882799,29.2568239576754,16.0968206328873,10.8683177567001,1.80719576192283,2.50668955317945,2.02785126545153,7.95285947051099,4.37971383272372,0.283604451492204,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,6.45815609489357,12.4464629964426,30.1178451786254,4.25602058638028,6.72813120170769,0,0.74000264525148,22.4071945487832,6.06198024313596,8.82694276812677,0.302714855289863,1.72852777344,1.40592859100278,1.24864030732128,0.570471821544449,0.149448680551801,1.52664848236894,2.91371299862637,3.23036855415172,2.65400422631361,0.368502951935304,3.71972812232756,2.37600571456411,0.9890677171142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |||
|TSSclassifier=W | |||
|UniProt=B8ZZ73 | |||
|association_with_transcript=89bp_to_ENST00000409329_5end | |||
|description=CAGE_peak_4_at_IL1R1_5end | |||
|id=chr2:102721118..102721143,+ | |||
|ontology_enrichment_celltype=CL:0000048!2.22e-21!430;CL:0000055!3.14e-21!180;CL:0000723!6.55e-20!436;CL:0000034!1.28e-18!444;CL:0000057!8.29e-18!75;CL:0002320!1.38e-12!365;CL:0000134!5.77e-12!358;CL:0000680!5.23e-11!57;CL:0000056!5.23e-11!57;CL:0000355!5.23e-11!57;CL:0000187!8.92e-10!54;CL:0002057!1.93e-09!42;CL:0000393!3.55e-09!60;CL:0000211!3.55e-09!60;CL:0002620!3.95e-09!23;CL:0000219!4.00e-09!390;CL:0000183!4.96e-08!59;CL:0000860!6.08e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-13;33!CL:0002057;2.80e-13;33!CL:0002620;5.05e-10;23!CL:0000473;3.06e-08;39!CL:0000234;3.06e-08;39!CL:0002494;4.93e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.35e-23,427;CL:0000723,1.34e-22,433;CL:0000034,6.28e-22,441;CL:0002320,9.13e-16,361;CL:0000134,3.27e-15,354;CL:0000057,1.25e-14,76;CL:0000860,2.64e-13,42;CL:0002057,2.64e-13,42;CL:0000219,2.94e-11,386;CL:0000473,1.78e-10,48;CL:0000234,1.78e-10,48;CL:0002620,4.14e-10,23;CL:0002009,2.04e-08,61;CL:0000680,6.53e-08,58;CL:0000056,6.53e-08,58;CL:0000355,6.53e-08,58;CL:0002194,3.13e-07,59;CL:0000576,3.13e-07,59;CL:0000040,3.13e-07,59;CL:0000559,3.13e-07,59;CL:0002494,5.78e-07,16;CL:0000557,6.80e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.06e-13!167;UBERON:0000914!1.08e-12!83;UBERON:0002329!1.08e-12!83;UBERON:0003077!1.08e-12!83;UBERON:0003059!1.08e-12!83;UBERON:0007282!1.08e-12!83;UBERON:0009618!1.08e-12!83;UBERON:0007285!1.08e-12!83;UBERON:0004290!3.98e-12!70;UBERON:0002384!4.94e-12!375;UBERON:0002385!5.41e-10!63;UBERON:0001015!5.41e-10!63;UBERON:0000383!5.41e-10!63;UBERON:0001134!1.07e-09!61;UBERON:0002036!1.07e-09!61;UBERON:0003082!1.07e-09!61;UBERON:0000486!3.30e-09!82;UBERON:0005256!2.38e-08!143;UBERON:0000926!9.57e-08!448;UBERON:0004120!9.57e-08!448;UBERON:0006603!9.57e-08!448;UBERON:0000479!1.81e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.24e-16,371;UBERON:0002204,6.61e-13,167;UBERON:0000926,1.79e-10,315;UBERON:0004120,1.79e-10,315;UBERON:0006603,1.79e-10,315;UBERON:0002329,4.91e-09,71;UBERON:0003059,4.91e-09,71;UBERON:0007282,4.91e-09,71;UBERON:0004290,4.91e-09,71;UBERON:0009618,4.91e-09,71;UBERON:0003077,9.13e-09,72;UBERON:0007285,9.13e-09,72;UBERON:0007524,1.66e-08,73;UBERON:0003081,3.31e-08,203;UBERON:0002371,2.30e-07,76;UBERON:0007503,2.52e-07,78;UBERON:0005256,4.95e-07,122;UBERON:0002097,5.15e-07,41;UBERON:0002199,5.24e-07,46;UBERON:0002416,5.24e-07,46;UBERON:0000486,6.63e-07,83;UBERON:0001134,7.20e-07,62;UBERON:0002036,7.20e-07,62;UBERON:0003082,7.20e-07,62 | |||
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| |||
|short_description=p4@IL1R1 | |||
}} |
Revision as of 12:44, 12 September 2013
Short description: | p4@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000409329_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | B8ZZ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.35e-23 | 427 |
somatic stem cell | 1.34e-22 | 433 |
stem cell | 6.28e-22 | 441 |
connective tissue cell | 9.13e-16 | 361 |
mesenchymal cell | 3.27e-15 | 354 |
fibroblast | 1.25e-14 | 76 |
classical monocyte | 2.64e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.64e-13 | 42 |
motile cell | 2.94e-11 | 386 |
defensive cell | 1.78e-10 | 48 |
phagocyte | 1.78e-10 | 48 |
skin fibroblast | 4.14e-10 | 23 |
macrophage dendritic cell progenitor | 2.04e-08 | 61 |
muscle precursor cell | 6.53e-08 | 58 |
myoblast | 6.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.53e-08 | 58 |
monopoietic cell | 3.13e-07 | 59 |
monocyte | 3.13e-07 | 59 |
monoblast | 3.13e-07 | 59 |
promonocyte | 3.13e-07 | 59 |
cardiocyte | 5.78e-07 | 16 |
granulocyte monocyte progenitor cell | 6.80e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.24e-16 | 371 |
musculoskeletal system | 6.61e-13 | 167 |
mesoderm | 1.79e-10 | 315 |
mesoderm-derived structure | 1.79e-10 | 315 |
presumptive mesoderm | 1.79e-10 | 315 |
somite | 4.91e-09 | 71 |
presomitic mesoderm | 4.91e-09 | 71 |
presumptive segmental plate | 4.91e-09 | 71 |
dermomyotome | 4.91e-09 | 71 |
trunk paraxial mesoderm | 4.91e-09 | 71 |
paraxial mesoderm | 9.13e-09 | 72 |
presumptive paraxial mesoderm | 9.13e-09 | 72 |
dense mesenchyme tissue | 1.66e-08 | 73 |
lateral plate mesoderm | 3.31e-08 | 203 |
bone marrow | 2.30e-07 | 76 |
epithelial vesicle | 2.52e-07 | 78 |
trunk mesenchyme | 4.95e-07 | 122 |
skin of body | 5.15e-07 | 41 |
integument | 5.24e-07 | 46 |
integumental system | 5.24e-07 | 46 |
multilaminar epithelium | 6.63e-07 | 83 |
skeletal muscle tissue | 7.20e-07 | 62 |
striated muscle tissue | 7.20e-07 | 62 |
myotome | 7.20e-07 | 62 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.