FFCP PHASE1:Hg19::chr22:31644309..31644350,+: Difference between revisions
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{{FFCP | 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262336,1.75904826792687,0,1.08043821351123,1.5299169235277,0,0.980593287015622,0,7.26341328325297,10.9907168121022,3.8039015482506,1.69927114687817,0.845855261818682,1.09578409555081,0,4.99951028095841,2.82315897372553,0,0,4.58729283404541,4.87354582714934,2.36657343289777,4.28346388202763,2.18175345170189,1.0580536810308,2.60396512716726,5.54610754357702,3.46101249699031,1.26166424835079,3.82429501872934,0.633492505057185,6.22131861426089,7.21486994217013,11.4868624418556,4.011320628678,1.36401656792831,1.07185652062471,4.1458471972939,8.17120667308972,7.46318936653433,7.61806180683969,2.45437857376823,3.47618400056804,0.112131862580613,10.820016907288,8.48892193624521,8.49095316798149,4.10679961302337,5.32081218815241,4.94883217209467,2.32862249582209,0,0,1.9307228228694,0,7.03922827210363,3.66724332548599,4.88275413978886,1.99727032255654,2.41528552309231,0|short_description=p3@LIMK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6614 | |||
|TSSclassifier=S | |||
|UniProt=C9JK61,Q7L3H5,P53671 | |||
|association_with_transcript=0bp_to_ENST00000425203,NM_001031801,NM_016733,uc003akj.2,uc003akk.2,uc011aln.1_5end | |||
|coexpression_cluster_id=C4094 | |||
|description=CAGE_peak_3_at_LIMK2_5end | |||
|id=chr22:31644309..31644350,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-09!43;CL:0002077!1.29e-09!33;CL:0002159!1.07e-07!13;CL:0000183!7.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002077;8.41e-09;34!CL:0002159;3.21e-08;14!CL:0002076;1.26e-07;42!CL:0000349;1.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002077,7.73e-10,34;CL:0002076,1.99e-09,42;CL:0002159,3.13e-08,14;CL:0000349,2.02e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.46e-26!365;UBERON:0004121!1.71e-22!169;UBERON:0000924!1.51e-21!173;UBERON:0006601!1.51e-21!173;UBERON:0000033!5.14e-19!123;UBERON:0000153!7.36e-19!129;UBERON:0007811!7.36e-19!129;UBERON:0000481!4.65e-17!347;UBERON:0000064!1.14e-15!219;UBERON:0000119!1.68e-14!312;UBERON:0000483!2.71e-14!309;UBERON:0000468!3.00e-14!659;UBERON:0003075!4.49e-14!86;UBERON:0007284!4.49e-14!86;UBERON:0002346!5.32e-13!90;UBERON:0002616!1.51e-12!59;UBERON:0001049!2.53e-12!57;UBERON:0005068!2.53e-12!57;UBERON:0006241!2.53e-12!57;UBERON:0007135!2.53e-12!57;UBERON:0000922!1.65e-11!612;UBERON:0002050!1.87e-11!605;UBERON:0005423!1.87e-11!605;UBERON:0000923!3.01e-11!604;UBERON:0005291!3.01e-11!604;UBERON:0006598!3.01e-11!604;UBERON:0002532!3.01e-11!604;UBERON:0003056!4.68e-11!61;UBERON:0000467!5.12e-11!625;UBERON:0005743!5.29e-11!86;UBERON:0000480!9.38e-11!626;UBERON:0000062!1.36e-10!511;UBERON:0000955!1.44e-10!69;UBERON:0006238!1.44e-10!69;UBERON:0001017!4.07e-10!82;UBERON:0000073!6.20e-10!94;UBERON:0001016!6.20e-10!94;UBERON:0000477!4.50e-09!286;UBERON:0003080!2.42e-08!42;UBERON:0002780!4.81e-08!41;UBERON:0001890!4.81e-08!41;UBERON:0006240!4.81e-08!41;UBERON:0007023!7.78e-08!115;UBERON:0000063!1.80e-07!97;UBERON:0001444!2.09e-07!48;UBERON:0005085!3.23e-07!29;UBERON:0003102!5.24e-07!95;UBERON:0000486!7.08e-07!82;UBERON:0001004!7.73e-07!72;UBERON:0005631!9.52e-07!14;UBERON:0000158!9.52e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;5.73e-11;31!UBERON:0000073;8.45e-08;53!UBERON:0002616;8.45e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.85e-23,104;UBERON:0004121,7.38e-23,171;UBERON:0000924,7.38e-23,171;UBERON:0006601,7.38e-23,171;UBERON:0000119,1.72e-15,309;UBERON:0000483,2.83e-15,306;UBERON:0003075,3.91e-15,82;UBERON:0007284,3.91e-15,82;UBERON:0002346,4.82e-14,86;UBERON:0010314,3.98e-13,132;UBERON:0001049,1.77e-12,56;UBERON:0005068,1.77e-12,56;UBERON:0006241,1.77e-12,56;UBERON:0007135,1.77e-12,56;UBERON:0005423,2.63e-12,581;UBERON:0002050,7.13e-12,564;UBERON:0000073,1.42e-11,53;UBERON:0002616,1.42e-11,53;UBERON:0000922,1.81e-11,592;UBERON:0003056,2.98e-11,61;UBERON:0000923,1.35e-10,560;UBERON:0010316,1.35e-10,560;UBERON:0005291,1.35e-10,560;UBERON:0006598,1.35e-10,560;UBERON:0010317,1.35e-10,560;UBERON:0002532,1.35e-10,560;UBERON:0000955,2.67e-10,68;UBERON:0006238,2.67e-10,68;UBERON:0001017,8.87e-10,81;UBERON:0000033,3.49e-09,56;UBERON:0000153,7.13e-09,62;UBERON:0007811,7.13e-09,62;UBERON:0001016,1.68e-08,89;UBERON:0002780,2.46e-08,41;UBERON:0001890,2.46e-08,41;UBERON:0003080,2.46e-08,41;UBERON:0006240,2.46e-08,41;UBERON:0003102,3.63e-08,99;UBERON:0005085,8.06e-08,31;UBERON:0011216,8.64e-08,223;UBERON:0001444,1.09e-07,49;UBERON:0001004,1.69e-07,74;UBERON:0004111,1.93e-07,240;UBERON:0007023,4.48e-07,114;UBERON:0005631,5.48e-07,14;UBERON:0000158,5.48e-07,14 | |||
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| |||
|short_description=p3@LIMK2 | |||
}} |
Revision as of 11:33, 12 September 2013
Short description: | p3@LIMK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LIMK2_5end |
Coexpression cluster: | C4094_Urothelial_Prostate_serous_Mallassezderived_Keratinocyte_Esophageal_Corneal |
Association with transcript: | 0bp_to_ENST00000425203, NM_001031801, NM_016733, uc003akj.2, uc003akk.2, uc011aln.1_5end |
EntrezGene: | LIMK2 |
HGNC: | 6614 |
UniProt: | C9JK61Q7L3H5P53671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 7.73e-10 | 34 |
endo-epithelial cell | 1.99e-09 | 42 |
general ecto-epithelial cell | 3.13e-08 | 14 |
extraembryonic cell | 2.02e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.