FFCP PHASE1:Hg19::chr21:39628951..39628954,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3772|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6261|TSSclassifier=S|UniProt=Q99712|association_with_transcript=81bp_to_ENST00000398938,NM_170736,uc002yww.2_5end|description=CAGE_peak_19_at_KCNJ15_5end|id=chr21:39628951..39628954,+|ontology_enrichment_celltype=CL:0000775!3.55e-11!3;CL:0002076!1.05e-07!43|ontology_enrichment_celltype_v019=CL:0000775;2.06e-43;3!CL:0000094;9.44e-17;8!CL:1001319;2.38e-15;1!CL:1000600;2.38e-15;1!CL:0000081;2.35e-12;11!CL:0000317;2.48e-08;2!CL:1000448;2.48e-08;2!CL:0002308;2.48e-08;2!CL:0002140;2.48e-08;2|ontology_enrichment_celltype_v019_2=CL:0000775,2.95e-43,3;CL:0000094,1.08e-16,8;CL:1001319,2.06e-15,1;CL:1000600,2.06e-15,1;CL:0000081,2.58e-12,11;CL:0000317,2.00e-08,2;CL:1000448,2.00e-08,2;CL:0002308,2.00e-08,2;CL:0002140,2.00e-08,2|ontology_enrichment_development_v019=UBERON:0008801;9.28e-16;1!UBERON:0005754;9.28e-16;1!UBERON:0003918;2.40e-13;10!UBERON:0007687;2.40e-13;10!UBERON:0007297;1.55e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!7.83e-08!44;UBERON:0004119!8.11e-08!169;UBERON:0000925!8.11e-08!169;UBERON:0006595!8.11e-08!169;UBERON:0001008!1.33e-07!45;UBERON:0001004!3.08e-07!72;UBERON:0000161!7.87e-07!35|ontology_enrichment_uberon_v019=UBERON:0006947;3.65e-20;3!UBERON:0004054;3.65e-20;3!UBERON:0001000;9.28e-16;1!UBERON:0001831;9.28e-16;1!UBERON:0000998;9.28e-16;1!UBERON:0006868;9.28e-16;1!UBERON:0005352;9.28e-16;1!UBERON:0001567;9.28e-16;1!UBERON:0005904;2.22e-15;4!UBERON:0004645;2.38e-15;1!UBERON:0001256;2.38e-15;1!UBERON:0001259;2.38e-15;1!UBERON:0000365;2.45e-12;5!UBERON:0006554;8.27e-12;30!UBERON:0001008;8.27e-12;30!UBERON:0005910;1.94e-10;6!UBERON:0001829;1.55e-08;2!UBERON:0004089;1.55e-08;2!UBERON:0001255;2.48e-08;2!UBERON:0002419;2.48e-08;2!UBERON:0007771;2.48e-08;2!UBERON:0003297;2.48e-08;2!UBERON:0001821;2.48e-08;2!UBERON:0003487;2.48e-08;2!UBERON:0001820;2.48e-08;2!UBERON:0001556;2.48e-08;2!UBERON:0000489;4.57e-08;29|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.32e-20,3;UBERON:0004054,3.32e-20,3;UBERON:0000998,7.46e-16,1;UBERON:0006868,7.46e-16,1;UBERON:0001000,9.99e-16,1;UBERON:0005352,9.99e-16,1;UBERON:0001831,1.16e-15,1;UBERON:0001567,1.16e-15,1;UBERON:0008801,1.16e-15,1;UBERON:0004645,2.06e-15,1;UBERON:0001256,2.06e-15,1;UBERON:0001259,2.06e-15,1;UBERON:0005904,2.07e-15,4;UBERON:0000365,2.00e-12,5;UBERON:0000489,1.82e-11,31;UBERON:0006554,1.14e-10,47;UBERON:0005910,1.65e-10,6;UBERON:0001008,1.94e-10,48;UBERON:0002113,4.67e-09,26;UBERON:0003918,4.67e-09,26;UBERON:0011143,4.67e-09,26;UBERON:0005095,4.67e-09,26;UBERON:0007687,4.67e-09,26;UBERON:0001829,1.73e-08,2;UBERON:0004089,1.73e-08,2;UBERON:0002419,2.00e-08,2;UBERON:0007771,2.00e-08,2;UBERON:0003297,2.00e-08,2;UBERON:0001821,2.00e-08,2;UBERON:0003487,2.00e-08,2;UBERON:0001820,2.00e-08,2;UBERON:0005089,2.00e-08,2;UBERON:0005088,2.00e-08,2;UBERON:0001255,2.31e-08,2;UBERON:0001556,2.31e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,5.9832291840805,2.07207756718018,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.231046011313244,0,0,2.53323909342902,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0.48335359146061,0,0,0,0.107420244868274,0,0,0.801288320820636,0,0,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0.43050537267123,0,0,2.75668080248351,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0.993573058514948,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,1.73372556058236,1.15400093896996,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6261 | |||
|TSSclassifier=S | |||
|UniProt=Q99712 | |||
|association_with_transcript=81bp_to_ENST00000398938,NM_170736,uc002yww.2_5end | |||
|description=CAGE_peak_19_at_KCNJ15_5end | |||
|id=chr21:39628951..39628954,+ | |||
|ontology_enrichment_celltype=CL:0000775!3.55e-11!3;CL:0002076!1.05e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.06e-43;3!CL:0000094;9.44e-17;8!CL:1001319;2.38e-15;1!CL:1000600;2.38e-15;1!CL:0000081;2.35e-12;11!CL:0000317;2.48e-08;2!CL:1000448;2.48e-08;2!CL:0002308;2.48e-08;2!CL:0002140;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.95e-43,3;CL:0000094,1.08e-16,8;CL:1001319,2.06e-15,1;CL:1000600,2.06e-15,1;CL:0000081,2.58e-12,11;CL:0000317,2.00e-08,2;CL:1000448,2.00e-08,2;CL:0002308,2.00e-08,2;CL:0002140,2.00e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.28e-16;1!UBERON:0005754;9.28e-16;1!UBERON:0003918;2.40e-13;10!UBERON:0007687;2.40e-13;10!UBERON:0007297;1.55e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!7.83e-08!44;UBERON:0004119!8.11e-08!169;UBERON:0000925!8.11e-08!169;UBERON:0006595!8.11e-08!169;UBERON:0001008!1.33e-07!45;UBERON:0001004!3.08e-07!72;UBERON:0000161!7.87e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.65e-20;3!UBERON:0004054;3.65e-20;3!UBERON:0001000;9.28e-16;1!UBERON:0001831;9.28e-16;1!UBERON:0000998;9.28e-16;1!UBERON:0006868;9.28e-16;1!UBERON:0005352;9.28e-16;1!UBERON:0001567;9.28e-16;1!UBERON:0005904;2.22e-15;4!UBERON:0004645;2.38e-15;1!UBERON:0001256;2.38e-15;1!UBERON:0001259;2.38e-15;1!UBERON:0000365;2.45e-12;5!UBERON:0006554;8.27e-12;30!UBERON:0001008;8.27e-12;30!UBERON:0005910;1.94e-10;6!UBERON:0001829;1.55e-08;2!UBERON:0004089;1.55e-08;2!UBERON:0001255;2.48e-08;2!UBERON:0002419;2.48e-08;2!UBERON:0007771;2.48e-08;2!UBERON:0003297;2.48e-08;2!UBERON:0001821;2.48e-08;2!UBERON:0003487;2.48e-08;2!UBERON:0001820;2.48e-08;2!UBERON:0001556;2.48e-08;2!UBERON:0000489;4.57e-08;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.32e-20,3;UBERON:0004054,3.32e-20,3;UBERON:0000998,7.46e-16,1;UBERON:0006868,7.46e-16,1;UBERON:0001000,9.99e-16,1;UBERON:0005352,9.99e-16,1;UBERON:0001831,1.16e-15,1;UBERON:0001567,1.16e-15,1;UBERON:0008801,1.16e-15,1;UBERON:0004645,2.06e-15,1;UBERON:0001256,2.06e-15,1;UBERON:0001259,2.06e-15,1;UBERON:0005904,2.07e-15,4;UBERON:0000365,2.00e-12,5;UBERON:0000489,1.82e-11,31;UBERON:0006554,1.14e-10,47;UBERON:0005910,1.65e-10,6;UBERON:0001008,1.94e-10,48;UBERON:0002113,4.67e-09,26;UBERON:0003918,4.67e-09,26;UBERON:0011143,4.67e-09,26;UBERON:0005095,4.67e-09,26;UBERON:0007687,4.67e-09,26;UBERON:0001829,1.73e-08,2;UBERON:0004089,1.73e-08,2;UBERON:0002419,2.00e-08,2;UBERON:0007771,2.00e-08,2;UBERON:0003297,2.00e-08,2;UBERON:0001821,2.00e-08,2;UBERON:0003487,2.00e-08,2;UBERON:0001820,2.00e-08,2;UBERON:0005089,2.00e-08,2;UBERON:0005088,2.00e-08,2;UBERON:0001255,2.31e-08,2;UBERON:0001556,2.31e-08,2 | |||
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|short_description=p19@KCNJ15 | |||
}} |
Revision as of 10:21, 12 September 2013
Short description: | p19@KCNJ15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_KCNJ15_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000398938, NM_170736, uc002yww.2_5end |
EntrezGene: | KCNJ15 |
HGNC: | 6261 |
UniProt: | Q99712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.95e-43 | 3 |
granulocyte | 1.08e-16 | 8 |
bladder cell | 2.06e-15 | 1 |
lower urinary tract cell | 2.06e-15 | 1 |
blood cell | 2.58e-12 | 11 |
sebum secreting cell | 2.00e-08 | 2 |
epithelial cell of sweat gland | 2.00e-08 | 2 |
epithelial cell of skin gland | 2.00e-08 | 2 |
acinar cell of sebaceous gland | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.32e-20 | 3 |
internal male genitalia | 3.32e-20 | 3 |
seminal vesicle | 7.46e-16 | 1 |
seminal fluid secreting gland | 7.46e-16 | 1 |
vas deferens | 9.99e-16 | 1 |
spermatic cord | 9.99e-16 | 1 |
parotid gland | 1.16e-15 | 1 |
cheek | 1.16e-15 | 1 |
parotid gland primordium | 1.16e-15 | 1 |
urinary bladder urothelium | 2.06e-15 | 1 |
wall of urinary bladder | 2.06e-15 | 1 |
mucosa of urinary bladder | 2.06e-15 | 1 |
duct of male reproductive system | 2.07e-15 | 4 |
urothelium | 2.00e-12 | 5 |
cavitated compound organ | 1.82e-11 | 31 |
urinary system structure | 1.14e-10 | 47 |
transitional epithelium | 1.65e-10 | 6 |
renal system | 1.94e-10 | 48 |
kidney | 4.67e-09 | 26 |
kidney mesenchyme | 4.67e-09 | 26 |
upper urinary tract | 4.67e-09 | 26 |
kidney rudiment | 4.67e-09 | 26 |
kidney field | 4.67e-09 | 26 |
major salivary gland | 1.73e-08 | 2 |
midface | 1.73e-08 | 2 |
skin gland | 2.00e-08 | 2 |
epidermis gland | 2.00e-08 | 2 |
gland of integumental system | 2.00e-08 | 2 |
sebaceous gland | 2.00e-08 | 2 |
skin sebaceous gland | 2.00e-08 | 2 |
sweat gland | 2.00e-08 | 2 |
sweat gland placode | 2.00e-08 | 2 |
sebaceous gland placode | 2.00e-08 | 2 |
urinary bladder | 2.31e-08 | 2 |
lower urinary tract | 2.31e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.