FFCP PHASE1:Hg19::chr21:27011685..27011704,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14686|TSSclassifier=S|UniProt=A8MQ45,P57087,A8MTB0,A8MXS1|association_with_transcript=96bp_to_ENST00000312957,NM_021219,uc002ylp.1,uc002ylq.1,uc002ylr.1,uc010glh.1,uc010gli.1,uc011ace.1,uc011acf.1_5end|description=CAGE_peak_6_at_JAM2_5end|id=chr21:27011685..27011704,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.94e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.12e-43!115;UBERON:0000073!5.32e-37!94;UBERON:0001016!5.32e-37!94;UBERON:0001017!7.42e-37!82;UBERON:0005743!1.15e-36!86;UBERON:0001049!8.73e-36!57;UBERON:0005068!8.73e-36!57;UBERON:0006241!8.73e-36!57;UBERON:0007135!8.73e-36!57;UBERON:0003075!1.08e-32!86;UBERON:0007284!1.08e-32!86;UBERON:0002346!8.70e-31!90;UBERON:0000955!4.42e-30!69;UBERON:0006238!4.42e-30!69;UBERON:0002616!3.58e-29!59;UBERON:0003080!2.34e-27!42;UBERON:0004121!4.67e-27!169;UBERON:0002780!1.23e-26!41;UBERON:0001890!1.23e-26!41;UBERON:0006240!1.23e-26!41;UBERON:0000924!3.91e-26!173;UBERON:0006601!3.91e-26!173;UBERON:0003056!2.50e-24!61;UBERON:0002020!9.43e-24!34;UBERON:0003528!9.43e-24!34;UBERON:0000153!1.34e-23!129;UBERON:0007811!1.34e-23!129;UBERON:0000033!1.44e-23!123;UBERON:0001893!1.91e-23!34;UBERON:0002791!7.12e-23!33;UBERON:0001869!2.15e-22!32;UBERON:0000956!6.53e-18!25;UBERON:0000203!6.53e-18!25;UBERON:0002619!3.84e-16!22;UBERON:0000475!2.80e-15!365;UBERON:0001950!1.05e-14!20;UBERON:0000064!4.51e-11!219;UBERON:0000468!5.67e-11!659;UBERON:0000025!7.28e-10!194;UBERON:0003076!1.89e-09!15;UBERON:0003057!1.89e-09!15;UBERON:0000481!4.40e-09!347;UBERON:0004111!7.39e-09!241;UBERON:0000467!1.39e-08!625;UBERON:0000480!1.87e-08!626;UBERON:0000119!3.02e-08!312;UBERON:0000483!3.78e-08!309;UBERON:0004732!1.56e-07!13;UBERON:0000477!2.10e-07!286;UBERON:0000062!2.45e-07!511;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9;UBERON:0000922!2.79e-07!612;UBERON:0002298!4.00e-07!8;UBERON:0004733!4.13e-07!12;UBERON:0002028!4.13e-07!12;UBERON:0007277!4.13e-07!12|ontology_enrichment_uberon_v019=UBERON:0003528;3.68e-30;34!UBERON:0002020;3.68e-30;34!UBERON:0001869;5.86e-30;32!UBERON:0001893;8.38e-30;34!UBERON:0002791;1.17e-29;32!UBERON:0002780;2.57e-27;41!UBERON:0001890;2.57e-27;41!UBERON:0000956;6.81e-26;25!UBERON:0000203;6.81e-26;25!UBERON:0000073;1.20e-25;53!UBERON:0002616;1.20e-25;53!UBERON:0002619;4.83e-23;22!UBERON:0001950;9.81e-21;20!UBERON:0000955;2.10e-17;68!UBERON:0001017;2.82e-17;75!UBERON:0001016;7.97e-16;83!UBERON:0007023;2.81e-14;114!UBERON:0000125;1.12e-10;9!UBERON:0002308;1.12e-10;9!UBERON:0002298;6.99e-09;6!UBERON:0004732;1.10e-08;13!UBERON:0009663;2.93e-08;7!UBERON:0004733;4.88e-08;12!UBERON:0002028;4.88e-08;12!UBERON:0000200;5.03e-08;6!UBERON:0002420;6.12e-08;9!UBERON:0007245;6.12e-08;9!UBERON:0010009;6.12e-08;9!UBERON:0010011;6.12e-08;9!UBERON:0000454;6.12e-08;9!UBERON:0011216;1.06e-07;132!UBERON:0002021;2.36e-07;5!UBERON:0001872;3.51e-07;5!UBERON:0010314;6.84e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.37e-53,114;UBERON:0001049,1.02e-48,56;UBERON:0005068,1.02e-48,56;UBERON:0006241,1.02e-48,56;UBERON:0007135,1.02e-48,56;UBERON:0001017,4.90e-45,81;UBERON:0000073,1.07e-44,53;UBERON:0002616,1.07e-44,53;UBERON:0001016,7.22e-43,89;UBERON:0003075,5.19e-41,82;UBERON:0007284,5.19e-41,82;UBERON:0000955,7.33e-39,68;UBERON:0006238,7.33e-39,68;UBERON:0002346,3.86e-38,86;UBERON:0002780,5.99e-38,41;UBERON:0001890,5.99e-38,41;UBERON:0003080,5.99e-38,41;UBERON:0006240,5.99e-38,41;UBERON:0003528,1.15e-35,34;UBERON:0002020,1.15e-35,34;UBERON:0001893,3.51e-35,34;UBERON:0001869,1.82e-33,32;UBERON:0002791,4.00e-33,32;UBERON:0010314,6.34e-33,132;UBERON:0010371,3.78e-32,104;UBERON:0004121,1.69e-28,171;UBERON:0000924,1.69e-28,171;UBERON:0006601,1.69e-28,171;UBERON:0003056,1.37e-27,61;UBERON:0000956,3.39e-26,25;UBERON:0000203,3.39e-26,25;UBERON:0002619,2.54e-23,22;UBERON:0001950,5.22e-21,20;UBERON:0011216,1.95e-20,223;UBERON:0000025,1.32e-12,192;UBERON:0003076,1.16e-11,15;UBERON:0003057,1.16e-11,15;UBERON:0004111,4.14e-11,240;UBERON:0000125,7.96e-11,9;UBERON:0002308,7.96e-11,9;UBERON:0002298,5.92e-09,6;UBERON:0004732,9.10e-09,13;UBERON:0009663,2.35e-08,7;UBERON:0004733,4.32e-08,12;UBERON:0002028,4.32e-08,12;UBERON:0007277,4.32e-08,12;UBERON:0000200,4.81e-08,6;UBERON:0002420,5.42e-08,9;UBERON:0007245,5.42e-08,9;UBERON:0010009,5.42e-08,9;UBERON:0010011,5.42e-08,9;UBERON:0000454,5.42e-08,9;UBERON:0002050,1.59e-07,564;UBERON:0002021,1.71e-07,5;UBERON:0000923,1.91e-07,560;UBERON:0010316,1.91e-07,560;UBERON:0005291,1.91e-07,560;UBERON:0006598,1.91e-07,560;UBERON:0010317,1.91e-07,560;UBERON:0002532,1.91e-07,560;UBERON:0000922,2.66e-07,592;UBERON:0005423,3.31e-07,581;UBERON:0000483,3.42e-07,306;UBERON:0001872,3.47e-07,5;UBERON:0000119,6.17e-07,309|phase1_expression=0.5450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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |||
|TSSclassifier=S | |||
|UniProt=A8MQ45,P57087,A8MTB0,A8MXS1 | |||
|association_with_transcript=96bp_to_ENST00000312957,NM_021219,uc002ylp.1,uc002ylq.1,uc002ylr.1,uc010glh.1,uc010gli.1,uc011ace.1,uc011acf.1_5end | |||
|description=CAGE_peak_6_at_JAM2_5end | |||
|id=chr21:27011685..27011704,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p6@JAM2 | |||
}} |
Revision as of 09:56, 12 September 2013
Short description: | p6@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000312957, NM_021219, uc002ylp.1, uc002ylq.1, uc002ylr.1, uc010glh.1, uc010gli.1, uc011ace.1, uc011acf.1_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | A8MQ45P57087A8MTB0A8MXS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.