FFCP PHASE1:Hg19::chr20:5904190..5904198,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C377|description=CAGE_peak_at_chr20:5904190..5904198,+|id=chr20:5904190..5904198,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.09e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;3.72e-09;14|ontology_enrichment_disease_v019_2=DOID:3119,3.72e-09,14|ontology_enrichment_uberon=UBERON:0001049!1.01e-51!57;UBERON:0005068!1.01e-51!57;UBERON:0006241!1.01e-51!57;UBERON:0007135!1.01e-51!57;UBERON:0002616!9.53e-46!59;UBERON:0000955!2.97e-41!69;UBERON:0006238!2.97e-41!69;UBERON:0001017!6.09e-37!82;UBERON:0005743!5.47e-35!86;UBERON:0007023!1.78e-34!115;UBERON:0003075!1.56e-32!86;UBERON:0007284!1.56e-32!86;UBERON:0000073!3.50e-31!94;UBERON:0001016!3.50e-31!94;UBERON:0002346!7.58e-31!90;UBERON:0002780!5.26e-30!41;UBERON:0001890!5.26e-30!41;UBERON:0006240!5.26e-30!41;UBERON:0003080!3.22e-29!42;UBERON:0003076!2.46e-25!15;UBERON:0003057!2.46e-25!15;UBERON:0004733!2.59e-25!12;UBERON:0002028!2.59e-25!12;UBERON:0007277!2.59e-25!12;UBERON:0002020!5.05e-24!34;UBERON:0003528!5.05e-24!34;UBERON:0004732!2.85e-23!13;UBERON:0001869!5.02e-22!32;UBERON:0003296!3.33e-21!4;UBERON:0010133!3.33e-21!4;UBERON:0000033!6.62e-21!123;UBERON:0001893!1.30e-20!34;UBERON:0000200!5.54e-20!6;UBERON:0000153!1.11e-19!129;UBERON:0007811!1.11e-19!129;UBERON:0002680!2.08e-19!9;UBERON:0001895!2.08e-19!9;UBERON:0010092!2.08e-19!9;UBERON:0002619!2.92e-19!22;UBERON:0003056!4.38e-19!61;UBERON:0002791!3.84e-18!33;UBERON:0001950!5.07e-17!20;UBERON:0000956!7.96e-17!25;UBERON:0000203!7.96e-17!25;UBERON:0002298!5.23e-15!8;UBERON:0004121!5.78e-15!169;UBERON:0000988!6.16e-15!3;UBERON:0000924!1.73e-14!173;UBERON:0006601!1.73e-14!173;UBERON:0000025!1.92e-12!194;UBERON:0001894!3.65e-12!7;UBERON:0006222!3.65e-12!7;UBERON:0000007!1.20e-11!2;UBERON:0001905!2.59e-11!2;UBERON:0002757!2.59e-11!2;UBERON:0010134!2.59e-11!2;UBERON:0002784!2.59e-11!2;UBERON:0005408!2.59e-11!2;UBERON:0001899!2.59e-11!2;UBERON:0002148!2.42e-10!2;UBERON:0009662!2.42e-10!2;UBERON:0001871!5.09e-10!7;UBERON:0004111!8.63e-10!241;UBERON:0002308!9.62e-09!9;UBERON:0000125!9.62e-09!9;UBERON:0002037!2.43e-08!6;UBERON:0006215!2.43e-08!6;UBERON:0001896!1.44e-07!3;UBERON:0005290!1.44e-07!3;UBERON:0010096!1.44e-07!3;UBERON:0005383!1.54e-07!3;UBERON:0005382!1.54e-07!3;UBERON:0002771!1.64e-07!3;UBERON:0000477!2.54e-07!286;UBERON:0006331!3.56e-07!3|ontology_enrichment_uberon_v019=UBERON:0003296;1.46e-63;4!UBERON:0010133;1.46e-63;4!UBERON:0000007;4.77e-57;2!UBERON:0001894;9.10e-37;7!UBERON:0001954;1.78e-15;2!UBERON:0003022;1.78e-15;2!UBERON:0002421;1.78e-15;2!UBERON:0002600;1.78e-15;2!UBERON:0001905;2.37e-15;2!UBERON:0002757;2.37e-15;2!UBERON:0010134;2.37e-15;2!UBERON:0005408;2.37e-15;2!UBERON:0001899;2.37e-15;2!UBERON:0002780;6.23e-10;41!UBERON:0001890;6.23e-10;41!UBERON:0000073;1.46e-09;53!UBERON:0002616;1.46e-09;53!UBERON:0002784;2.43e-08;4!UBERON:0002368;7.81e-08;33!UBERON:0000955;3.26e-07;68!UBERON:0000349;5.70e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.46e-63,4;UBERON:0010133,1.46e-63,4;UBERON:0000007,6.36e-57,2;UBERON:0001894,9.10e-37,7;UBERON:0006222,9.10e-37,7;UBERON:0001954,1.78e-15,2;UBERON:0003022,1.78e-15,2;UBERON:0002421,1.78e-15,2;UBERON:0002600,1.78e-15,2;UBERON:0001905,2.05e-15,2;UBERON:0002757,2.05e-15,2;UBERON:0010134,2.05e-15,2;UBERON:0005408,2.05e-15,2;UBERON:0001899,2.05e-15,2;UBERON:0000073,2.12e-13,53;UBERON:0002616,2.12e-13,53;UBERON:0001049,1.03e-12,56;UBERON:0005068,1.03e-12,56;UBERON:0006241,1.03e-12,56;UBERON:0007135,1.03e-12,56;UBERON:0002780,2.90e-11,41;UBERON:0001890,2.90e-11,41;UBERON:0003080,2.90e-11,41;UBERON:0006240,2.90e-11,41;UBERON:0000955,2.05e-10,68;UBERON:0006238,2.05e-10,68;UBERON:0001017,7.91e-09,81;UBERON:0003075,7.91e-09,82;UBERON:0007284,7.91e-09,82;UBERON:0002346,1.96e-08,86;UBERON:0002784,2.26e-08,4;UBERON:0001016,5.46e-08,89;UBERON:0002368,5.73e-08,35;UBERON:0003056,8.93e-08,61;UBERON:0010371,4.99e-07,104;UBERON:0000349,5.70e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5904190..5904198,+ | |||
|id=chr20:5904190..5904198,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.09e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;3.72e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.72e-09,14 | |||
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|short_description=p@chr20:5904190..5904198,+ | |||
}} |
Revision as of 09:27, 12 September 2013
Short description: | p@chr20:5904190..5904198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:5904190..5904198, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.72e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.