FFCP PHASE1:Hg19::chr20:5904056..5904076,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C377|description=CAGE_peak_at_chr20:5904056..5904076,+|id=chr20:5904056..5904076,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;3.00e-10;1|ontology_enrichment_celltype_v019_2=CL:0002553,2.50e-10,1|ontology_enrichment_development_v019=UBERON:0006215;1.88e-28;3!UBERON:0010227;1.50e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;3.00e-10;1!DOID:1357;3.00e-10;1|ontology_enrichment_disease_v019_2=DOID:0050619,3.61e-10,1;DOID:1357,3.61e-10,1|ontology_enrichment_uberon=UBERON:0001049!9.71e-51!57;UBERON:0005068!9.71e-51!57;UBERON:0006241!9.71e-51!57;UBERON:0007135!9.71e-51!57;UBERON:0001017!1.77e-47!82;UBERON:0000073!2.64e-45!94;UBERON:0001016!2.64e-45!94;UBERON:0005743!1.16e-44!86;UBERON:0002616!7.88e-41!59;UBERON:0000955!4.88e-39!69;UBERON:0006238!4.88e-39!69;UBERON:0002780!9.84e-34!41;UBERON:0001890!9.84e-34!41;UBERON:0006240!9.84e-34!41;UBERON:0003075!2.06e-33!86;UBERON:0007284!2.06e-33!86;UBERON:0002346!4.42e-33!90;UBERON:0003080!9.54e-33!42;UBERON:0007023!5.68e-31!115;UBERON:0002020!5.45e-30!34;UBERON:0003528!5.45e-30!34;UBERON:0001893!1.23e-29!34;UBERON:0001869!2.36e-29!32;UBERON:0002791!5.62e-28!33;UBERON:0000924!1.41e-23!173;UBERON:0006601!1.41e-23!173;UBERON:0002619!1.67e-23!22;UBERON:0004121!2.25e-23!169;UBERON:0001950!8.66e-23!20;UBERON:0000033!6.52e-22!123;UBERON:0000153!2.46e-20!129;UBERON:0007811!2.46e-20!129;UBERON:0000956!3.16e-20!25;UBERON:0000203!3.16e-20!25;UBERON:0003056!4.05e-20!61;UBERON:0003076!3.35e-19!15;UBERON:0003057!3.35e-19!15;UBERON:0004733!5.21e-14!12;UBERON:0002028!5.21e-14!12;UBERON:0007277!5.21e-14!12;UBERON:0000025!9.27e-14!194;UBERON:0004732!8.96e-13!13;UBERON:0004111!1.03e-11!241;UBERON:0002308!2.04e-11!9;UBERON:0000125!2.04e-11!9;UBERON:0000369!2.08e-09!4;UBERON:0002435!2.08e-09!4;UBERON:0000204!2.08e-09!4;UBERON:0010082!2.08e-09!4;UBERON:0000200!2.22e-09!6;UBERON:0002298!2.28e-09!8;UBERON:0002680!3.84e-09!9;UBERON:0001895!3.84e-09!9;UBERON:0010092!3.84e-09!9;UBERON:0002420!1.41e-08!9;UBERON:0007245!1.41e-08!9;UBERON:0010009!1.41e-08!9;UBERON:0010011!1.41e-08!9;UBERON:0000454!1.41e-08!9;UBERON:0000477!2.05e-08!286;UBERON:0009663!6.18e-08!7;UBERON:0005383!1.38e-07!3;UBERON:0005382!1.38e-07!3;UBERON:0000988!1.48e-07!3;UBERON:0002240!4.25e-07!3;UBERON:0001871!4.59e-07!7;UBERON:0000483!6.02e-07!309;UBERON:0000064!6.03e-07!219;UBERON:0002021!6.72e-07!5;UBERON:0001896!7.03e-07!3;UBERON:0005290!7.03e-07!3;UBERON:0010096!7.03e-07!3;UBERON:0001872!7.17e-07!5;UBERON:0000119!9.20e-07!312|ontology_enrichment_uberon_v019=UBERON:0003296;2.24e-21;4!UBERON:0010133;2.24e-21;4!UBERON:0000007;8.14e-20;2!UBERON:0002680;1.40e-16;9!UBERON:0001895;1.40e-16;9!UBERON:0002037;1.52e-14;6!UBERON:0000073;8.09e-13;53!UBERON:0002616;8.09e-13;53!UBERON:0004733;1.71e-12;12!UBERON:0002028;1.71e-12;12!UBERON:0001894;1.80e-12;7!UBERON:0004732;1.51e-11;13!UBERON:0002079;1.50e-10;1!UBERON:0001764;3.00e-10;1!UBERON:0001825;3.00e-10;1!UBERON:0000955;6.92e-10;68!UBERON:0002780;1.16e-07;41!UBERON:0001890;1.16e-07;41!UBERON:0001017;1.57e-07;75!UBERON:0000200;6.01e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.89e-21,4;UBERON:0010133,1.89e-21,4;UBERON:0000007,8.54e-20,2;UBERON:0000073,8.22e-19,53;UBERON:0002616,8.22e-19,53;UBERON:0001049,9.88e-18,56;UBERON:0005068,9.88e-18,56;UBERON:0006241,9.88e-18,56;UBERON:0007135,9.88e-18,56;UBERON:0002680,1.10e-16,9;UBERON:0001895,1.10e-16,9;UBERON:0010092,1.10e-16,9;UBERON:0002037,1.45e-14,6;UBERON:0006215,1.45e-14,6;UBERON:0000955,4.05e-14,68;UBERON:0006238,4.05e-14,68;UBERON:0004733,1.43e-12,12;UBERON:0002028,1.43e-12,12;UBERON:0007277,1.43e-12,12;UBERON:0001894,1.63e-12,7;UBERON:0006222,1.63e-12,7;UBERON:0001016,2.12e-12,89;UBERON:0001017,1.23e-11,81;UBERON:0003075,1.23e-11,82;UBERON:0007284,1.23e-11,82;UBERON:0004732,1.28e-11,13;UBERON:0002346,5.08e-11,86;UBERON:0002079,1.73e-10,1;UBERON:0001764,3.61e-10,1;UBERON:0001825,3.61e-10,1;UBERON:0003076,4.31e-10,15;UBERON:0003057,4.31e-10,15;UBERON:0002780,5.85e-10,41;UBERON:0001890,5.85e-10,41;UBERON:0003080,5.85e-10,41;UBERON:0006240,5.85e-10,41;UBERON:0010371,7.84e-09,104;UBERON:0000025,4.22e-08,192;UBERON:0007023,5.00e-08,114;UBERON:0010314,5.72e-08,132;UBERON:0000200,5.10e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5904056..5904076,+ | |||
|id=chr20:5904056..5904076,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.00e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.50e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.88e-28;3!UBERON:0010227;1.50e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.00e-10;1!DOID:1357;3.00e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.61e-10,1;DOID:1357,3.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.71e-51!57;UBERON:0005068!9.71e-51!57;UBERON:0006241!9.71e-51!57;UBERON:0007135!9.71e-51!57;UBERON:0001017!1.77e-47!82;UBERON:0000073!2.64e-45!94;UBERON:0001016!2.64e-45!94;UBERON:0005743!1.16e-44!86;UBERON:0002616!7.88e-41!59;UBERON:0000955!4.88e-39!69;UBERON:0006238!4.88e-39!69;UBERON:0002780!9.84e-34!41;UBERON:0001890!9.84e-34!41;UBERON:0006240!9.84e-34!41;UBERON:0003075!2.06e-33!86;UBERON:0007284!2.06e-33!86;UBERON:0002346!4.42e-33!90;UBERON:0003080!9.54e-33!42;UBERON:0007023!5.68e-31!115;UBERON:0002020!5.45e-30!34;UBERON:0003528!5.45e-30!34;UBERON:0001893!1.23e-29!34;UBERON:0001869!2.36e-29!32;UBERON:0002791!5.62e-28!33;UBERON:0000924!1.41e-23!173;UBERON:0006601!1.41e-23!173;UBERON:0002619!1.67e-23!22;UBERON:0004121!2.25e-23!169;UBERON:0001950!8.66e-23!20;UBERON:0000033!6.52e-22!123;UBERON:0000153!2.46e-20!129;UBERON:0007811!2.46e-20!129;UBERON:0000956!3.16e-20!25;UBERON:0000203!3.16e-20!25;UBERON:0003056!4.05e-20!61;UBERON:0003076!3.35e-19!15;UBERON:0003057!3.35e-19!15;UBERON:0004733!5.21e-14!12;UBERON:0002028!5.21e-14!12;UBERON:0007277!5.21e-14!12;UBERON:0000025!9.27e-14!194;UBERON:0004732!8.96e-13!13;UBERON:0004111!1.03e-11!241;UBERON:0002308!2.04e-11!9;UBERON:0000125!2.04e-11!9;UBERON:0000369!2.08e-09!4;UBERON:0002435!2.08e-09!4;UBERON:0000204!2.08e-09!4;UBERON:0010082!2.08e-09!4;UBERON:0000200!2.22e-09!6;UBERON:0002298!2.28e-09!8;UBERON:0002680!3.84e-09!9;UBERON:0001895!3.84e-09!9;UBERON:0010092!3.84e-09!9;UBERON:0002420!1.41e-08!9;UBERON:0007245!1.41e-08!9;UBERON:0010009!1.41e-08!9;UBERON:0010011!1.41e-08!9;UBERON:0000454!1.41e-08!9;UBERON:0000477!2.05e-08!286;UBERON:0009663!6.18e-08!7;UBERON:0005383!1.38e-07!3;UBERON:0005382!1.38e-07!3;UBERON:0000988!1.48e-07!3;UBERON:0002240!4.25e-07!3;UBERON:0001871!4.59e-07!7;UBERON:0000483!6.02e-07!309;UBERON:0000064!6.03e-07!219;UBERON:0002021!6.72e-07!5;UBERON:0001896!7.03e-07!3;UBERON:0005290!7.03e-07!3;UBERON:0010096!7.03e-07!3;UBERON:0001872!7.17e-07!5;UBERON:0000119!9.20e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.24e-21;4!UBERON:0010133;2.24e-21;4!UBERON:0000007;8.14e-20;2!UBERON:0002680;1.40e-16;9!UBERON:0001895;1.40e-16;9!UBERON:0002037;1.52e-14;6!UBERON:0000073;8.09e-13;53!UBERON:0002616;8.09e-13;53!UBERON:0004733;1.71e-12;12!UBERON:0002028;1.71e-12;12!UBERON:0001894;1.80e-12;7!UBERON:0004732;1.51e-11;13!UBERON:0002079;1.50e-10;1!UBERON:0001764;3.00e-10;1!UBERON:0001825;3.00e-10;1!UBERON:0000955;6.92e-10;68!UBERON:0002780;1.16e-07;41!UBERON:0001890;1.16e-07;41!UBERON:0001017;1.57e-07;75!UBERON:0000200;6.01e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.89e-21,4;UBERON:0010133,1.89e-21,4;UBERON:0000007,8.54e-20,2;UBERON:0000073,8.22e-19,53;UBERON:0002616,8.22e-19,53;UBERON:0001049,9.88e-18,56;UBERON:0005068,9.88e-18,56;UBERON:0006241,9.88e-18,56;UBERON:0007135,9.88e-18,56;UBERON:0002680,1.10e-16,9;UBERON:0001895,1.10e-16,9;UBERON:0010092,1.10e-16,9;UBERON:0002037,1.45e-14,6;UBERON:0006215,1.45e-14,6;UBERON:0000955,4.05e-14,68;UBERON:0006238,4.05e-14,68;UBERON:0004733,1.43e-12,12;UBERON:0002028,1.43e-12,12;UBERON:0007277,1.43e-12,12;UBERON:0001894,1.63e-12,7;UBERON:0006222,1.63e-12,7;UBERON:0001016,2.12e-12,89;UBERON:0001017,1.23e-11,81;UBERON:0003075,1.23e-11,82;UBERON:0007284,1.23e-11,82;UBERON:0004732,1.28e-11,13;UBERON:0002346,5.08e-11,86;UBERON:0002079,1.73e-10,1;UBERON:0001764,3.61e-10,1;UBERON:0001825,3.61e-10,1;UBERON:0003076,4.31e-10,15;UBERON:0003057,4.31e-10,15;UBERON:0002780,5.85e-10,41;UBERON:0001890,5.85e-10,41;UBERON:0003080,5.85e-10,41;UBERON:0006240,5.85e-10,41;UBERON:0010371,7.84e-09,104;UBERON:0000025,4.22e-08,192;UBERON:0007023,5.00e-08,114;UBERON:0010314,5.72e-08,132;UBERON:0000200,5.10e-07,6 | |||
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|short_description=p@chr20:5904056..5904076,+ | |||
}} |
Revision as of 09:27, 12 September 2013
Short description: | p@chr20:5904056..5904076, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:5904056..5904076, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.50e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.61e-10 | 1 |
maxillary sinus cancer | 3.61e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.