FFCP PHASE1:Hg19::chr20:48099182..48099214,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6231|TSSclassifier=S|UniProt=Q14721|association_with_transcript=0bp_to_ENST00000371741,uc002xur.1_5end|coexpression_cluster_id=C24|description=CAGE_peak_3_at_KCNB1_5end|id=chr20:48099182..48099214,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.34e-28!115;UBERON:0005743!4.81e-27!86;UBERON:0001017!8.09e-26!82;UBERON:0000073!4.60e-24!94;UBERON:0001016!4.60e-24!94;UBERON:0000955!2.57e-20!69;UBERON:0006238!2.57e-20!69;UBERON:0003075!5.17e-20!86;UBERON:0007284!5.17e-20!86;UBERON:0002346!6.13e-19!90;UBERON:0001049!2.34e-17!57;UBERON:0005068!2.34e-17!57;UBERON:0006241!2.34e-17!57;UBERON:0007135!2.34e-17!57;UBERON:0002616!1.13e-16!59;UBERON:0003056!2.70e-16!61;UBERON:0002780!4.86e-16!41;UBERON:0001890!4.86e-16!41;UBERON:0006240!4.86e-16!41;UBERON:0003080!1.31e-15!42;UBERON:0000033!3.76e-14!123;UBERON:0003296!1.80e-13!4;UBERON:0010133!1.80e-13!4;UBERON:0000153!2.71e-13!129;UBERON:0007811!2.71e-13!129;UBERON:0004121!1.31e-12!169;UBERON:0001905!1.64e-12!2;UBERON:0002757!1.64e-12!2;UBERON:0010134!1.64e-12!2;UBERON:0002784!1.64e-12!2;UBERON:0005408!1.64e-12!2;UBERON:0001899!1.64e-12!2;UBERON:0000924!3.32e-12!173;UBERON:0006601!3.32e-12!173;UBERON:0002360!1.31e-11!2;UBERON:0000094!1.31e-11!2;UBERON:0007645!1.31e-11!2;UBERON:0001869!1.74e-11!32;UBERON:0002020!8.60e-11!34;UBERON:0003528!8.60e-11!34;UBERON:0001893!9.63e-11!34;UBERON:0002619!1.63e-10!22;UBERON:0000956!3.39e-09!25;UBERON:0000203!3.39e-09!25;UBERON:0002791!7.50e-09!33;UBERON:0001950!1.17e-08!20;UBERON:0001894!7.03e-08!7;UBERON:0006222!7.03e-08!7;UBERON:0002581!7.19e-07!1;UBERON:0002022!8.03e-07!1;UBERON:0002902!8.49e-07!1;UBERON:0009899!8.49e-07!1|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0002360;6.96e-21;2!UBERON:0000094;6.96e-21;2!UBERON:0010743;6.96e-21;2!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0002360,6.96e-21,2;UBERON:0000094,6.96e-21,2;UBERON:0010743,6.96e-21,2;UBERON:0000970,1.42e-08,21;UBERON:0002104,1.42e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,1.09692698576986,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6088800064463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6231 | |||
|TSSclassifier=S | |||
|UniProt=Q14721 | |||
|association_with_transcript=0bp_to_ENST00000371741,uc002xur.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_KCNB1_5end | |||
|id=chr20:48099182..48099214,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.34e-28!115;UBERON:0005743!4.81e-27!86;UBERON:0001017!8.09e-26!82;UBERON:0000073!4.60e-24!94;UBERON:0001016!4.60e-24!94;UBERON:0000955!2.57e-20!69;UBERON:0006238!2.57e-20!69;UBERON:0003075!5.17e-20!86;UBERON:0007284!5.17e-20!86;UBERON:0002346!6.13e-19!90;UBERON:0001049!2.34e-17!57;UBERON:0005068!2.34e-17!57;UBERON:0006241!2.34e-17!57;UBERON:0007135!2.34e-17!57;UBERON:0002616!1.13e-16!59;UBERON:0003056!2.70e-16!61;UBERON:0002780!4.86e-16!41;UBERON:0001890!4.86e-16!41;UBERON:0006240!4.86e-16!41;UBERON:0003080!1.31e-15!42;UBERON:0000033!3.76e-14!123;UBERON:0003296!1.80e-13!4;UBERON:0010133!1.80e-13!4;UBERON:0000153!2.71e-13!129;UBERON:0007811!2.71e-13!129;UBERON:0004121!1.31e-12!169;UBERON:0001905!1.64e-12!2;UBERON:0002757!1.64e-12!2;UBERON:0010134!1.64e-12!2;UBERON:0002784!1.64e-12!2;UBERON:0005408!1.64e-12!2;UBERON:0001899!1.64e-12!2;UBERON:0000924!3.32e-12!173;UBERON:0006601!3.32e-12!173;UBERON:0002360!1.31e-11!2;UBERON:0000094!1.31e-11!2;UBERON:0007645!1.31e-11!2;UBERON:0001869!1.74e-11!32;UBERON:0002020!8.60e-11!34;UBERON:0003528!8.60e-11!34;UBERON:0001893!9.63e-11!34;UBERON:0002619!1.63e-10!22;UBERON:0000956!3.39e-09!25;UBERON:0000203!3.39e-09!25;UBERON:0002791!7.50e-09!33;UBERON:0001950!1.17e-08!20;UBERON:0001894!7.03e-08!7;UBERON:0006222!7.03e-08!7;UBERON:0002581!7.19e-07!1;UBERON:0002022!8.03e-07!1;UBERON:0002902!8.49e-07!1;UBERON:0009899!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0001894;1.14e-23;7!UBERON:0002360;6.96e-21;2!UBERON:0000094;6.96e-21;2!UBERON:0010743;6.96e-21;2!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0002360,6.96e-21,2;UBERON:0000094,6.96e-21,2;UBERON:0010743,6.96e-21,2;UBERON:0000970,1.42e-08,21;UBERON:0002104,1.42e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24 | |||
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|short_description=p3@KCNB1 | |||
}} |
Revision as of 08:58, 12 September 2013
Short description: | p3@KCNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNB1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000371741, uc002xur.1_5end |
EntrezGene: | KCNB1 |
HGNC: | 6231 |
UniProt: | Q14721 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
meninx | 6.96e-21 | 2 |
membrane organ | 6.96e-21 | 2 |
meningeal cluster | 6.96e-21 | 2 |
eye | 1.42e-08 | 21 |
visual system | 1.42e-08 | 21 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
sense organ | 1.27e-07 | 24 |
sensory system | 1.27e-07 | 24 |
entire sense organ system | 1.27e-07 | 24 |
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