FFCP PHASE1:Hg19::chr20:45948030..45948047,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23613|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9397|TSSclassifier=W|UniProt=Q5JV90|association_with_transcript=-225bp_to_ENST00000468376,uc002xtg.2_5end|coexpression_cluster_id=C128|description=CAGE_peak_16_at_ZMYND8_5end|id=chr20:45948030..45948047,-|ontology_enrichment_celltype=CL:0000047!8.13e-07!8;CL:0000540!8.30e-07!6;CL:0000031!8.30e-07!6;CL:0000404!8.30e-07!6|ontology_enrichment_celltype_v019=CL:0000039;1.90e-22;7!CL:0000586;1.90e-22;7!CL:0002605;1.81e-13;3!CL:0000128;1.21e-12;7!CL:0000126;1.21e-12;7!CL:0000127;1.21e-12;7!CL:0002319;1.02e-08;25|ontology_enrichment_celltype_v019_2=CL:0000039,1.41e-22,7;CL:0000586,1.41e-22,7;CL:0002605,1.82e-13,3;CL:0000128,1.16e-12,7;CL:0000126,1.16e-12,7;CL:0000127,1.16e-12,7;CL:0002453,1.16e-12,7;CL:0002319,1.02e-08,25|ontology_enrichment_development_v019=UBERON:0009117;8.51e-16;10!UBERON:0005564;8.51e-16;10!UBERON:0005425;9.96e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;5.66e-11;22!DOID:2994;5.66e-11;22|ontology_enrichment_disease_v019_2=DOID:3095,5.05e-11,22;DOID:2994,5.05e-11,22|ontology_enrichment_uberon=UBERON:0001017!2.55e-33!82;UBERON:0005743!6.78e-32!86;UBERON:0003080!2.73e-30!42;UBERON:0001049!3.67e-30!57;UBERON:0005068!3.67e-30!57;UBERON:0006241!3.67e-30!57;UBERON:0007135!3.67e-30!57;UBERON:0002780!3.32e-29!41;UBERON:0001890!3.32e-29!41;UBERON:0006240!3.32e-29!41;UBERON:0000073!2.11e-28!94;UBERON:0001016!2.11e-28!94;UBERON:0000955!7.82e-27!69;UBERON:0006238!7.82e-27!69;UBERON:0002616!7.88e-27!59;UBERON:0001893!1.51e-26!34;UBERON:0002791!1.14e-25!33;UBERON:0002020!1.67e-25!34;UBERON:0003528!1.67e-25!34;UBERON:0002346!6.56e-25!90;UBERON:0003075!9.31e-25!86;UBERON:0007284!9.31e-25!86;UBERON:0001869!2.71e-24!32;UBERON:0003056!2.22e-22!61;UBERON:0000924!1.83e-18!173;UBERON:0006601!1.83e-18!173;UBERON:0004121!4.58e-18!169;UBERON:0000956!2.91e-17!25;UBERON:0000203!2.91e-17!25;UBERON:0007023!2.68e-16!115;UBERON:0000033!2.00e-15!123;UBERON:0000153!1.36e-14!129;UBERON:0007811!1.36e-14!129;UBERON:0002619!3.35e-14!22;UBERON:0001950!3.79e-12!20;UBERON:0002308!6.73e-10!9;UBERON:0000125!6.73e-10!9;UBERON:0009663!4.21e-09!7;UBERON:0000025!1.21e-08!194;UBERON:0002420!1.58e-08!9;UBERON:0007245!1.58e-08!9;UBERON:0010009!1.58e-08!9;UBERON:0010011!1.58e-08!9;UBERON:0000454!1.58e-08!9;UBERON:0000119!4.39e-07!312;UBERON:0001872!8.09e-07!5|ontology_enrichment_uberon_v019=UBERON:0001875;1.05e-19;2!UBERON:0005162;1.05e-19;2!UBERON:0000122;1.05e-19;2!UBERON:0006514;1.05e-19;2!UBERON:0000473;1.12e-19;8!UBERON:0003135;2.21e-14;11!UBERON:0001893;5.97e-11;34!UBERON:0002336;9.96e-11;1!UBERON:0000941;9.96e-11;1!UBERON:0001785;9.96e-11;1!UBERON:0002464;9.96e-11;1!UBERON:0004904;9.96e-11;1!UBERON:0011215;9.96e-11;1!UBERON:0001018;9.96e-11;1!UBERON:0001021;9.96e-11;1!UBERON:0002473;9.96e-11;1!UBERON:0005340;9.96e-11;1!UBERON:0003544;9.96e-11;1!UBERON:0005970;9.96e-11;1!UBERON:0002316;9.96e-11;1!UBERON:0001020;9.96e-11;1!UBERON:0002437;9.96e-11;1!UBERON:0002780;1.10e-10;41!UBERON:0001890;1.10e-10;41!UBERON:0001869;2.25e-09;32!UBERON:0002791;2.59e-09;32!UBERON:0001016;5.55e-09;83!UBERON:0001017;7.36e-09;75!UBERON:0000073;8.33e-09;53!UBERON:0002616;8.33e-09;53!UBERON:0003528;9.47e-09;34!UBERON:0002020;9.47e-09;34!UBERON:0000991;1.30e-07;21!UBERON:0003101;2.84e-07;22!UBERON:0000079;2.84e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.58e-20,8;UBERON:0005162,8.72e-20,2;UBERON:0000122,8.72e-20,2;UBERON:0001875,1.41e-19,2;UBERON:0006514,1.41e-19,2;UBERON:0001016,2.65e-15,89;UBERON:0001017,1.57e-14,81;UBERON:0003135,1.83e-14,11;UBERON:0002780,2.54e-13,41;UBERON:0001890,2.54e-13,41;UBERON:0003080,2.54e-13,41;UBERON:0006240,2.54e-13,41;UBERON:0001893,1.72e-12,34;UBERON:0000955,5.45e-12,68;UBERON:0006238,5.45e-12,68;UBERON:0003056,4.91e-11,61;UBERON:0000941,8.22e-11,1;UBERON:0001785,8.22e-11,1;UBERON:0002464,8.22e-11,1;UBERON:0004904,8.22e-11,1;UBERON:0001021,8.22e-11,1;UBERON:0003902,8.22e-11,1;UBERON:0005425,8.22e-11,1;UBERON:0002336,9.97e-11,1;UBERON:0011215,9.97e-11,1;UBERON:0001018,9.97e-11,1;UBERON:0002473,9.97e-11,1;UBERON:0005340,9.97e-11,1;UBERON:0003544,9.97e-11,1;UBERON:0005970,9.97e-11,1;UBERON:0002316,9.97e-11,1;UBERON:0001020,9.97e-11,1;UBERON:0002437,9.97e-11,1;UBERON:0000073,3.78e-10,53;UBERON:0002616,3.78e-10,53;UBERON:0002791,6.97e-10,32;UBERON:0001869,6.97e-10,32;UBERON:0001049,1.45e-09,56;UBERON:0005068,1.45e-09,56;UBERON:0006241,1.45e-09,56;UBERON:0007135,1.45e-09,56;UBERON:0003528,2.71e-09,34;UBERON:0002020,2.71e-09,34;UBERON:0003075,6.19e-08,82;UBERON:0007284,6.19e-08,82;UBERON:0000991,1.18e-07,21;UBERON:0009196,1.18e-07,21;UBERON:0009117,1.18e-07,21;UBERON:0005564,1.18e-07,21;UBERON:0002346,1.63e-07,86;UBERON:0004176,2.59e-07,22;UBERON:0003101,2.59e-07,22;UBERON:0000079,2.59e-07,22;UBERON:0004121,4.21e-07,171;UBERON:0000924,4.21e-07,171;UBERON:0006601,4.21e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0.602694528023977,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9397 | |||
|TSSclassifier=W | |||
|UniProt=Q5JV90 | |||
|association_with_transcript=-225bp_to_ENST00000468376,uc002xtg.2_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_16_at_ZMYND8_5end | |||
|id=chr20:45948030..45948047,- | |||
|ontology_enrichment_celltype=CL:0000047!8.13e-07!8;CL:0000540!8.30e-07!6;CL:0000031!8.30e-07!6;CL:0000404!8.30e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.90e-22;7!CL:0000586;1.90e-22;7!CL:0002605;1.81e-13;3!CL:0000128;1.21e-12;7!CL:0000126;1.21e-12;7!CL:0000127;1.21e-12;7!CL:0002319;1.02e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.41e-22,7;CL:0000586,1.41e-22,7;CL:0002605,1.82e-13,3;CL:0000128,1.16e-12,7;CL:0000126,1.16e-12,7;CL:0000127,1.16e-12,7;CL:0002453,1.16e-12,7;CL:0002319,1.02e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.51e-16;10!UBERON:0005564;8.51e-16;10!UBERON:0005425;9.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;5.66e-11;22!DOID:2994;5.66e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.05e-11,22;DOID:2994,5.05e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.55e-33!82;UBERON:0005743!6.78e-32!86;UBERON:0003080!2.73e-30!42;UBERON:0001049!3.67e-30!57;UBERON:0005068!3.67e-30!57;UBERON:0006241!3.67e-30!57;UBERON:0007135!3.67e-30!57;UBERON:0002780!3.32e-29!41;UBERON:0001890!3.32e-29!41;UBERON:0006240!3.32e-29!41;UBERON:0000073!2.11e-28!94;UBERON:0001016!2.11e-28!94;UBERON:0000955!7.82e-27!69;UBERON:0006238!7.82e-27!69;UBERON:0002616!7.88e-27!59;UBERON:0001893!1.51e-26!34;UBERON:0002791!1.14e-25!33;UBERON:0002020!1.67e-25!34;UBERON:0003528!1.67e-25!34;UBERON:0002346!6.56e-25!90;UBERON:0003075!9.31e-25!86;UBERON:0007284!9.31e-25!86;UBERON:0001869!2.71e-24!32;UBERON:0003056!2.22e-22!61;UBERON:0000924!1.83e-18!173;UBERON:0006601!1.83e-18!173;UBERON:0004121!4.58e-18!169;UBERON:0000956!2.91e-17!25;UBERON:0000203!2.91e-17!25;UBERON:0007023!2.68e-16!115;UBERON:0000033!2.00e-15!123;UBERON:0000153!1.36e-14!129;UBERON:0007811!1.36e-14!129;UBERON:0002619!3.35e-14!22;UBERON:0001950!3.79e-12!20;UBERON:0002308!6.73e-10!9;UBERON:0000125!6.73e-10!9;UBERON:0009663!4.21e-09!7;UBERON:0000025!1.21e-08!194;UBERON:0002420!1.58e-08!9;UBERON:0007245!1.58e-08!9;UBERON:0010009!1.58e-08!9;UBERON:0010011!1.58e-08!9;UBERON:0000454!1.58e-08!9;UBERON:0000119!4.39e-07!312;UBERON:0001872!8.09e-07!5 | |||
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|short_description=p16@ZMYND8 | |||
}} |
Revision as of 08:51, 12 September 2013
Short description: | p16@ZMYND8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ZMYND8_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -225bp_to_ENST00000468376, uc002xtg.2_5end |
EntrezGene: | ZMYND8 |
HGNC: | 9397 |
UniProt: | Q5JV90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.41e-22 | 7 |
germ cell | 1.41e-22 | 7 |
astrocyte of the cerebral cortex | 1.82e-13 | 3 |
oligodendrocyte | 1.16e-12 | 7 |
macroglial cell | 1.16e-12 | 7 |
astrocyte | 1.16e-12 | 7 |
oligodendrocyte precursor cell | 1.16e-12 | 7 |
neural cell | 1.02e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.05e-11 | 22 |
germ cell cancer | 5.05e-11 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.