FFCP PHASE1:Hg19::chr20:43727145..43727152,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C373|description=CAGE_peak_at_chr20:43727145..43727152,-|id=chr20:43727145..43727152,-|ontology_enrichment_celltype=CL:0002536!2.43e-09!2|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2!CL:0002577;5.96e-34;3|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2;CL:0002577,5.96e-34,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5!DOID:1749;1.86e-08;14|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5;DOID:1749,1.86e-08,14|ontology_enrichment_uberon=UBERON:0002680!2.29e-15!9;UBERON:0001895!2.29e-15!9;UBERON:0010092!2.29e-15!9;UBERON:0001049!3.67e-15!57;UBERON:0005068!3.67e-15!57;UBERON:0006241!3.67e-15!57;UBERON:0007135!3.67e-15!57;UBERON:0002616!1.59e-14!59;UBERON:0002346!1.11e-13!90;UBERON:0000955!3.02e-13!69;UBERON:0006238!3.02e-13!69;UBERON:0002020!3.17e-13!34;UBERON:0003528!3.17e-13!34;UBERON:0003075!5.46e-13!86;UBERON:0007284!5.46e-13!86;UBERON:0000988!1.57e-12!3;UBERON:0001869!9.81e-12!32;UBERON:0004733!2.28e-11!12;UBERON:0002028!2.28e-11!12;UBERON:0007277!2.28e-11!12;UBERON:0000064!5.42e-11!219;UBERON:0001893!6.09e-11!34;UBERON:0000033!6.91e-11!123;UBERON:0001017!1.44e-10!82;UBERON:0004732!1.91e-10!13;UBERON:0001950!2.47e-10!20;UBERON:0000153!3.78e-10!129;UBERON:0007811!3.78e-10!129;UBERON:0005743!6.61e-10!86;UBERON:0000924!1.09e-09!173;UBERON:0006601!1.09e-09!173;UBERON:0002791!2.42e-09!33;UBERON:0002619!2.50e-09!22;UBERON:0004121!4.17e-09!169;UBERON:0003056!4.68e-09!61;UBERON:0003076!5.74e-09!15;UBERON:0003057!5.74e-09!15;UBERON:0002148!7.85e-09!2;UBERON:0009662!7.85e-09!2;UBERON:0002780!9.13e-09!41;UBERON:0001890!9.13e-09!41;UBERON:0006240!9.13e-09!41;UBERON:0000073!1.27e-08!94;UBERON:0001016!1.27e-08!94;UBERON:0003080!1.63e-08!42;UBERON:0000956!4.12e-08!25;UBERON:0000203!4.12e-08!25;UBERON:0000062!1.75e-07!511;UBERON:0002308!3.77e-07!9;UBERON:0000125!3.77e-07!9;UBERON:0007023!9.77e-07!115|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0001987;7.14e-26;4!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000474;1.77e-12;37!UBERON:0003100;1.65e-10;41!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0001987,7.14e-26,4;UBERON:0004340,7.14e-26,4;UBERON:0000995,4.86e-20,21;UBERON:0005795,3.41e-19,22;UBERON:0003975,3.41e-19,22;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0004175,4.64e-17,25;UBERON:0003124,1.91e-15,7;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0005631,2.00e-08,14;UBERON:0000158,2.00e-08,14;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.421352420106746,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61177619741208,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_at_chr20:43727145..43727152,- | |||
|id=chr20:43727145..43727152,- | |||
|ontology_enrichment_celltype=CL:0002536!2.43e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2!CL:0002577;5.96e-34;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2;CL:0002577,5.96e-34,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5!DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5;DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002680!2.29e-15!9;UBERON:0001895!2.29e-15!9;UBERON:0010092!2.29e-15!9;UBERON:0001049!3.67e-15!57;UBERON:0005068!3.67e-15!57;UBERON:0006241!3.67e-15!57;UBERON:0007135!3.67e-15!57;UBERON:0002616!1.59e-14!59;UBERON:0002346!1.11e-13!90;UBERON:0000955!3.02e-13!69;UBERON:0006238!3.02e-13!69;UBERON:0002020!3.17e-13!34;UBERON:0003528!3.17e-13!34;UBERON:0003075!5.46e-13!86;UBERON:0007284!5.46e-13!86;UBERON:0000988!1.57e-12!3;UBERON:0001869!9.81e-12!32;UBERON:0004733!2.28e-11!12;UBERON:0002028!2.28e-11!12;UBERON:0007277!2.28e-11!12;UBERON:0000064!5.42e-11!219;UBERON:0001893!6.09e-11!34;UBERON:0000033!6.91e-11!123;UBERON:0001017!1.44e-10!82;UBERON:0004732!1.91e-10!13;UBERON:0001950!2.47e-10!20;UBERON:0000153!3.78e-10!129;UBERON:0007811!3.78e-10!129;UBERON:0005743!6.61e-10!86;UBERON:0000924!1.09e-09!173;UBERON:0006601!1.09e-09!173;UBERON:0002791!2.42e-09!33;UBERON:0002619!2.50e-09!22;UBERON:0004121!4.17e-09!169;UBERON:0003056!4.68e-09!61;UBERON:0003076!5.74e-09!15;UBERON:0003057!5.74e-09!15;UBERON:0002148!7.85e-09!2;UBERON:0009662!7.85e-09!2;UBERON:0002780!9.13e-09!41;UBERON:0001890!9.13e-09!41;UBERON:0006240!9.13e-09!41;UBERON:0000073!1.27e-08!94;UBERON:0001016!1.27e-08!94;UBERON:0003080!1.63e-08!42;UBERON:0000956!4.12e-08!25;UBERON:0000203!4.12e-08!25;UBERON:0000062!1.75e-07!511;UBERON:0002308!3.77e-07!9;UBERON:0000125!3.77e-07!9;UBERON:0007023!9.77e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0001987;7.14e-26;4!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000474;1.77e-12;37!UBERON:0003100;1.65e-10;41!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0001987,7.14e-26,4;UBERON:0004340,7.14e-26,4;UBERON:0000995,4.86e-20,21;UBERON:0005795,3.41e-19,22;UBERON:0003975,3.41e-19,22;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0004175,4.64e-17,25;UBERON:0003124,1.91e-15,7;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0005631,2.00e-08,14;UBERON:0000158,2.00e-08,14;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.421352420106746,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61177619741208,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:43727145..43727152,- | |||
}} |
Revision as of 08:37, 12 September 2013
Short description: | p@chr20:43727145..43727152, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:43727145..43727152, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-50 | 2 |
placental epithelial cell | 5.96e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-50 | 2 |
cervix epithelium | 2.74e-50 | 2 |
placenta | 7.14e-26 | 4 |
allantois | 7.14e-26 | 4 |
uterus | 4.86e-20 | 21 |
embryonic uterus | 3.41e-19 | 22 |
internal female genitalia | 3.41e-19 | 22 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
internal genitalia | 4.64e-17 | 25 |
chorion | 1.91e-15 | 7 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
extraembryonic membrane | 2.00e-08 | 14 |
membranous layer | 2.00e-08 | 14 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.21e-21 | 5 |
squamous cell carcinoma | 1.86e-08 | 14 |
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