FFCP PHASE1:Hg19::chr20:42543441..42543497,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84969 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16095 | |||
|TSSclassifier=S | |||
|UniProt=G3XAC7 | |||
|association_with_transcript=0bp_to_ENST00000341197,ENST00000372992,NM_001098797,uc010ggo.2_5end | |||
|description=CAGE_peak_1_at_TOX2_5end | |||
|id=chr20:42543441..42543497,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000183!1.34e-16!59;CL:0000222!1.90e-16!119;CL:0000187!1.95e-15!54;CL:0000192!1.30e-13!42;CL:0000514!1.30e-13!42;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000393!3.95e-13!60;CL:0000211!3.95e-13!60;CL:0000057!2.56e-11!75;CL:0000359!7.12e-11!32;CL:0000115!3.19e-09!35;CL:0002139!4.19e-08!24;CL:0000071!7.74e-08!18;CL:0002546!7.74e-08!18;CL:0002078!8.58e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.39e-10;43!CL:0000359;1.98e-10;32!CL:0000187;4.55e-09;55!CL:0000115;9.54e-09;36!CL:0002139;3.47e-08;24!CL:0000071;6.90e-08;18!CL:0000393;5.62e-07;61!CL:0000211;5.62e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.99e-17,121;CL:0000187,2.88e-16,55;CL:0000192,2.68e-14,43;CL:0000514,2.68e-14,43;CL:0000680,7.83e-14,58;CL:0000056,7.83e-14,58;CL:0000355,7.83e-14,58;CL:0000393,1.56e-13,61;CL:0000211,1.56e-13,61;CL:0000057,1.33e-11,76;CL:0000359,4.82e-11,32;CL:0000115,6.76e-10,36;CL:0002139,3.18e-08,24;CL:0000071,5.94e-08,18;CL:0002546,5.94e-08,18;CL:0002078,4.69e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;1.39e-10;43!CL:0002546;6.90e-08;18!CL:0000355;2.06e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@TOX2 | |||
}} |
Revision as of 08:33, 12 September 2013
Short description: | p1@TOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341197, ENST00000372992, NM_001098797, uc010ggo.2_5end |
EntrezGene: | TOX2 |
HGNC: | 16095 |
UniProt: | G3XAC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.99e-17 | 121 |
muscle cell | 2.88e-16 | 55 |
smooth muscle cell | 2.68e-14 | 43 |
smooth muscle myoblast | 2.68e-14 | 43 |
muscle precursor cell | 7.83e-14 | 58 |
myoblast | 7.83e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.83e-14 | 58 |
electrically responsive cell | 1.56e-13 | 61 |
electrically active cell | 1.56e-13 | 61 |
fibroblast | 1.33e-11 | 76 |
vascular associated smooth muscle cell | 4.82e-11 | 32 |
endothelial cell | 6.76e-10 | 36 |
endothelial cell of vascular tree | 3.18e-08 | 24 |
blood vessel endothelial cell | 5.94e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.94e-08 | 18 |
meso-epithelial cell | 4.69e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.