FFCP PHASE1:Hg19::chr20:36662223..36662246,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58490|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16209|TSSclassifier=S|UniProt=E9PIQ9|association_with_transcript=0bp_to_ENST00000495457_5end|description=CAGE_peak_5_at_RPRD1B_5end|id=chr20:36662223..36662246,+|ontology_enrichment_celltype=CL:0000037!1.46e-21!172;CL:0000566!1.46e-21!172;CL:0000988!4.06e-20!182;CL:0002032!1.13e-19!165;CL:0000837!1.13e-19!165;CL:0000738!8.18e-16!140;CL:0002031!1.06e-12!124;CL:0002087!1.23e-11!119;CL:0000763!7.01e-11!112;CL:0000049!7.01e-11!112;CL:0000542!3.59e-09!53;CL:0000051!3.59e-09!53;CL:0000838!9.63e-09!52|ontology_enrichment_celltype_v019=CL:0000542;1.89e-09;53!CL:0000084;3.53e-08;25|ontology_enrichment_celltype_v019_2=CL:0000988,4.32e-21,177;CL:0000037,1.07e-20,168;CL:0002032,3.37e-19,161;CL:0000837,3.37e-19,161;CL:0000542,6.00e-18,53;CL:0000051,6.00e-18,53;CL:0000838,4.38e-17,52;CL:0000738,4.89e-15,136;CL:0002031,1.36e-10,120;CL:0002087,3.52e-10,115;CL:0000084,2.98e-08,25;CL:0000827,2.98e-08,25;CL:0000945,2.78e-07,24;CL:0000826,2.78e-07,24|ontology_enrichment_development_v019=CL:0000051;1.89e-09;53|ontology_enrichment_disease=DOID:162!3.03e-12!235;DOID:14566!1.52e-11!239;DOID:2531!5.83e-10!51;DOID:0060083!5.83e-10!51;DOID:305!6.45e-08!106;DOID:0050686!1.62e-07!137;DOID:1240!2.95e-07!39|ontology_enrichment_disease_v019=DOID:0060058;4.04e-08;10!DOID:2531;4.43e-08;51!DOID:0060083;4.43e-08;51!DOID:1036;1.41e-07;8|ontology_enrichment_disease_v019_2=DOID:2531,2.70e-12,51;DOID:0060083,2.70e-12,51;DOID:0050686,7.66e-10,137;DOID:162,9.93e-10,235;DOID:14566,3.94e-09,239;DOID:0060058,8.34e-09,10;DOID:1240,1.83e-07,39;DOID:1036,7.74e-07,8|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0,2.53299878168311,0,0.522371256399677,0,0.697801167972428,0.873765488520689,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.376627918784408,3.66784347590166,3.9408282935974,2.99100968991981,0.786728553697808,3.83829398097213,2.01260960310899,0,0.6024118375565,0.369754010166788,1.54934401160603,1.9903692548239,0.880801318004542,2.76997704265939,4.01088894940283,4.77423915574874,0.223915474239924,0,0,0.872389432677388,0.377875943688809,0.727752183563449,1.16214518452842,0.822335776043652,0.309706370895104,0.863077176966451,1.2808035326455,0.236482229888585,1.03423704220986,1.29096936716765,1.35426486594342,0.941211697713023,0.545812300115692,0.449446968890169,0.612167784741805,0.641858054152187,1.27867425159808,0.989553900560148,0.997318288108159,0,0.580418477257168,1.13477044938228,0.622822248995575,1.25624332628372,0,0.434377689410233,1.21079900526674,0.736555271975129,0.632924774881769,0.633765858935825,0.212604299965044,0.628975936525128,0.673971786878971,0.750884464207532,0.803627933485401,0.570025487482497,0.39783335439818,0.730656615058536,0,0,0,0.853460445133014,0.400395987036012,0,0,0,1.70763890732835,1.76171156811282,3.05818582500183,0,2.24203425192614,0.526768169550154,4.72103448273199,5.10913991573914,3.49522548299166,0,1.95553359980154,0,0,0.111410456885174,0.589211814949674,0.443067789167242,1.08321545506006,0.384273959177026,0.260118695119756,0.328875809207352,1.65810010671509,0.869409257205157,0.889719378972363,0.267540828089713,3.1360657141493,0.679856056185397,0.766440987203842,1.37450978193052,0.759059076058509,0.637130828648193,0,0,0,0.383959833463255,1.24930726552346,0.473554504088034,0,6.45141578319144,4.01160293675261,3.62061009706997,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.982343066232845,0,1.11235332835329,0.649094787309367,0.348259474598534,0.664789802594326,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.446498641420399,0.673588117878509,0.225222960966644,0,0,0.183201743930407,5.27121669744253,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0,0.454072282934794,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0.23486899728753,0.323745888736263,0.140450806702248,0.61246251376468,0.491337269247072,0,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0,0,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0.423863802319124,0,0,0,0,1.18143432568886,0,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0.860413786167011,0.365921118388786,0.265059536642971,0.232387885739037,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0,0,1.0647612003586,0.842923450390509,0.241011029883482,1.65440959098591,0.653638332277218,1.89816495288877,0.269662616320329,1.37355025587742,1.53898862778556,0,0,0,0,2.53510069643662,1.96565443335525,1.18157981336281,1.7658523976586,1.8448265781467,0,0.658501712451753,0,0.301586917234893,0.555530670951178,0,0,0,0.34779121492523,0.9392695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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16209 | |||
|TSSclassifier=S | |||
|UniProt=E9PIQ9 | |||
|association_with_transcript=0bp_to_ENST00000495457_5end | |||
|description=CAGE_peak_5_at_RPRD1B_5end | |||
|id=chr20:36662223..36662246,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.46e-21!172;CL:0000566!1.46e-21!172;CL:0000988!4.06e-20!182;CL:0002032!1.13e-19!165;CL:0000837!1.13e-19!165;CL:0000738!8.18e-16!140;CL:0002031!1.06e-12!124;CL:0002087!1.23e-11!119;CL:0000763!7.01e-11!112;CL:0000049!7.01e-11!112;CL:0000542!3.59e-09!53;CL:0000051!3.59e-09!53;CL:0000838!9.63e-09!52 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.89e-09;53!CL:0000084;3.53e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.32e-21,177;CL:0000037,1.07e-20,168;CL:0002032,3.37e-19,161;CL:0000837,3.37e-19,161;CL:0000542,6.00e-18,53;CL:0000051,6.00e-18,53;CL:0000838,4.38e-17,52;CL:0000738,4.89e-15,136;CL:0002031,1.36e-10,120;CL:0002087,3.52e-10,115;CL:0000084,2.98e-08,25;CL:0000827,2.98e-08,25;CL:0000945,2.78e-07,24;CL:0000826,2.78e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.89e-09;53 | |||
|ontology_enrichment_disease=DOID:162!3.03e-12!235;DOID:14566!1.52e-11!239;DOID:2531!5.83e-10!51;DOID:0060083!5.83e-10!51;DOID:305!6.45e-08!106;DOID:0050686!1.62e-07!137;DOID:1240!2.95e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.04e-08;10!DOID:2531;4.43e-08;51!DOID:0060083;4.43e-08;51!DOID:1036;1.41e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.70e-12,51;DOID:0060083,2.70e-12,51;DOID:0050686,7.66e-10,137;DOID:162,9.93e-10,235;DOID:14566,3.94e-09,239;DOID:0060058,8.34e-09,10;DOID:1240,1.83e-07,39;DOID:1036,7.74e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@RPRD1B | |||
}} |
Revision as of 08:24, 12 September 2013
Short description: | p5@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RPRD1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495457_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | E9PIQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.32e-21 | 177 |
hematopoietic stem cell | 1.07e-20 | 168 |
hematopoietic oligopotent progenitor cell | 3.37e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.37e-19 | 161 |
lymphocyte | 6.00e-18 | 53 |
common lymphoid progenitor | 6.00e-18 | 53 |
lymphoid lineage restricted progenitor cell | 4.38e-17 | 52 |
leukocyte | 4.89e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.36e-10 | 120 |
nongranular leukocyte | 3.52e-10 | 115 |
T cell | 2.98e-08 | 25 |
pro-T cell | 2.98e-08 | 25 |
lymphocyte of B lineage | 2.78e-07 | 24 |
pro-B cell | 2.78e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.70e-12 | 51 |
immune system cancer | 2.70e-12 | 51 |
organ system cancer | 7.66e-10 | 137 |
cancer | 9.93e-10 | 235 |
disease of cellular proliferation | 3.94e-09 | 239 |
lymphoma | 8.34e-09 | 10 |
leukemia | 1.83e-07 | 39 |
chronic leukemia | 7.74e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.