FFCP PHASE1:Hg19::chr20:33146612..33146623,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84557|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6838|TSSclassifier=S|UniProt=|association_with_transcript=33bp_to_ENST00000476428_5end|description=CAGE_peak_5_at_MAP1LC3A_5end|id=chr20:33146612..33146623,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;6.37e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.89e-31!57;UBERON:0005068!1.89e-31!57;UBERON:0006241!1.89e-31!57;UBERON:0007135!1.89e-31!57;UBERON:0001017!2.87e-29!82;UBERON:0005743!1.18e-28!86;UBERON:0000073!2.18e-27!94;UBERON:0001016!2.18e-27!94;UBERON:0002616!3.52e-27!59;UBERON:0000955!3.02e-26!69;UBERON:0006238!3.02e-26!69;UBERON:0002346!5.02e-26!90;UBERON:0003075!1.37e-24!86;UBERON:0007284!1.37e-24!86;UBERON:0003080!2.55e-23!42;UBERON:0002780!1.19e-22!41;UBERON:0001890!1.19e-22!41;UBERON:0006240!1.19e-22!41;UBERON:0007023!4.87e-22!115;UBERON:0002020!4.04e-21!34;UBERON:0003528!4.04e-21!34;UBERON:0001893!1.25e-20!34;UBERON:0001869!1.55e-20!32;UBERON:0002791!6.69e-20!33;UBERON:0002619!1.04e-17!22;UBERON:0003056!4.01e-17!61;UBERON:0001950!2.63e-16!20;UBERON:0000956!2.64e-16!25;UBERON:0000203!2.64e-16!25;UBERON:0000153!2.50e-13!129;UBERON:0007811!2.50e-13!129;UBERON:0000924!2.51e-13!173;UBERON:0006601!2.51e-13!173;UBERON:0000033!5.75e-13!123;UBERON:0004121!2.78e-12!169;UBERON:0003076!3.35e-09!15;UBERON:0003057!3.35e-09!15;UBERON:0004732!6.41e-08!13;UBERON:0004733!3.47e-07!12;UBERON:0002028!3.47e-07!12;UBERON:0007277!3.47e-07!12;UBERON:0001871!4.40e-07!7;UBERON:0000025!5.45e-07!194|ontology_enrichment_uberon_v019=UBERON:0002619;5.47e-42;22!UBERON:0001950;1.80e-41;20!UBERON:0003528;7.53e-37;34!UBERON:0002020;7.53e-37;34!UBERON:0001869;1.16e-36;32!UBERON:0000956;1.77e-36;25!UBERON:0000203;1.77e-36;25!UBERON:0002791;9.36e-34;32!UBERON:0001893;4.26e-33;34!UBERON:0000073;4.29e-29;53!UBERON:0002616;4.29e-29;53!UBERON:0002780;1.86e-28;41!UBERON:0001890;1.86e-28;41!UBERON:0000955;1.33e-23;68!UBERON:0001017;6.20e-20;75!UBERON:0001871;6.85e-18;6!UBERON:0001016;1.57e-16;83!UBERON:0002298;8.07e-16;6!UBERON:0004732;2.40e-15;13!UBERON:0001872;2.03e-13;5!UBERON:0004733;3.13e-13;12!UBERON:0002028;3.13e-13;12!UBERON:0000200;3.03e-11;6!UBERON:0007023;2.37e-09;114!UBERON:0000988;2.97e-09;3!UBERON:0000349;8.83e-09;5!UBERON:0002021;9.59e-09;5!UBERON:0001896;2.84e-08;3!UBERON:0005290;2.84e-08;3!UBERON:0002680;1.32e-07;9!UBERON:0001895;1.32e-07;9!UBERON:0000125;2.81e-07;9!UBERON:0002308;2.81e-07;9!UBERON:0002420;5.03e-07;9!UBERON:0007245;5.03e-07;9!UBERON:0010009;5.03e-07;9!UBERON:0010011;5.03e-07;9!UBERON:0000454;5.03e-07;9!UBERON:0001905;9.57e-07;2!UBERON:0002757;9.57e-07;2!UBERON:0010134;9.57e-07;2!UBERON:0005408;9.57e-07;2!UBERON:0001899;9.57e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.71e-56,56;UBERON:0005068,8.71e-56,56;UBERON:0006241,8.71e-56,56;UBERON:0007135,8.71e-56,56;UBERON:0000073,1.81e-52,53;UBERON:0002616,1.81e-52,53;UBERON:0001017,1.94e-52,81;UBERON:0001016,1.25e-48,89;UBERON:0000955,3.45e-46,68;UBERON:0006238,3.45e-46,68;UBERON:0002619,1.95e-42,22;UBERON:0003528,5.80e-42,34;UBERON:0002020,5.80e-42,34;UBERON:0001950,6.17e-42,20;UBERON:0001869,4.43e-41,32;UBERON:0002780,3.19e-40,41;UBERON:0001890,3.19e-40,41;UBERON:0003080,3.19e-40,41;UBERON:0006240,3.19e-40,41;UBERON:0001893,2.48e-38,34;UBERON:0002791,1.78e-37,32;UBERON:0003075,2.79e-37,82;UBERON:0007284,2.79e-37,82;UBERON:0000956,7.16e-37,25;UBERON:0000203,7.16e-37,25;UBERON:0002346,4.52e-35,86;UBERON:0007023,3.66e-29,114;UBERON:0010371,6.53e-29,104;UBERON:0003056,6.28e-27,61;UBERON:0004121,4.18e-21,171;UBERON:0000924,4.18e-21,171;UBERON:0006601,4.18e-21,171;UBERON:0010314,1.02e-20,132;UBERON:0001871,4.69e-18,6;UBERON:0011216,4.60e-17,223;UBERON:0003076,3.85e-16,15;UBERON:0003057,3.85e-16,15;UBERON:0002298,1.79e-15,6;UBERON:0004732,3.05e-15,13;UBERON:0001872,1.50e-13,5;UBERON:0004733,4.51e-13,12;UBERON:0002028,4.51e-13,12;UBERON:0007277,4.51e-13,12;UBERON:0000025,9.49e-12,192;UBERON:0000200,2.28e-11,6;UBERON:0000349,3.69e-09,5;UBERON:0000988,4.38e-09,3;UBERON:0002021,6.93e-09,5;UBERON:0001896,4.30e-08,3;UBERON:0005290,4.30e-08,3;UBERON:0010096,4.30e-08,3;UBERON:0002680,1.43e-07,9;UBERON:0001895,1.43e-07,9;UBERON:0010092,1.43e-07,9;UBERON:0004111,1.65e-07,240;UBERON:0000125,2.75e-07,9;UBERON:0002308,2.75e-07,9;UBERON:0002420,3.11e-07,9;UBERON:0007245,3.11e-07,9;UBERON:0010009,3.11e-07,9;UBERON:0010011,3.11e-07,9;UBERON:0000454,3.11e-07,9;UBERON:0001905,8.36e-07,2;UBERON:0002757,8.36e-07,2;UBERON:0010134,8.36e-07,2;UBERON:0005408,8.36e-07,2;UBERON:0001899,8.36e-07,2|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0.612002073732759,1.56727360739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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84557 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6838 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000476428_5end | |||
|description=CAGE_peak_5_at_MAP1LC3A_5end | |||
|id=chr20:33146612..33146623,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.37e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p5@MAP1LC3A | |||
}} |
Revision as of 08:09, 12 September 2013
Short description: | p5@MAP1LC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MAP1LC3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000476428_5end |
EntrezGene: | MAP1LC3A |
HGNC: | 6838 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.