FFCP PHASE1:Hg19::chr20:19870167..19870225,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |||
|TSSclassifier=S | |||
|UniProt=E7EPJ1,A1A4T0,Q8WYP3 | |||
|association_with_transcript=0bp_to_ENST00000440354,ENST00000465815,NM_018993,uc002wro.1,uc010gcu.1_5end | |||
|description=CAGE_peak_10_at_RIN2_5end | |||
|id=chr20:19870167..19870225,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.17e-13!24;CL:0000115!2.12e-10!35;CL:0000071!3.02e-10!18;CL:0002546!3.02e-10!18;CL:0000222!1.79e-08!119;CL:0002078!2.47e-08!44;CL:0000213!3.24e-07!57;CL:0000215!3.24e-07!57;CL:1000413!6.64e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.61e-20;24!CL:0000071;3.42e-15;18!CL:0000115;4.41e-14;36!CL:1000413;2.27e-09;9!CL:0002078;2.68e-09;45!CL:0000213;2.87e-07;58!CL:0000215;2.87e-07;58!CL:0002544;7.20e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.49e-20,24;CL:0000115,3.28e-17,36;CL:0000071,2.63e-15,18;CL:0002546,2.63e-15,18;CL:0002078,3.09e-13,45;CL:0000213,9.60e-12,58;CL:0000215,9.60e-12,58;CL:1000413,9.14e-10,9;CL:0000222,1.12e-07,121;CL:0002544,3.95e-07,6;CL:0005020,8.06e-07,6;CL:0002138,8.06e-07,6;CL:0005022,8.06e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.42e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p10@RIN2 | |||
}} |
Revision as of 07:40, 12 September 2013
Short description: | p10@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000440354, ENST00000465815, NM_018993, uc002wro.1, uc010gcu.1_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | E7EPJ1A1A4T0Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.49e-20 | 24 |
endothelial cell | 3.28e-17 | 36 |
blood vessel endothelial cell | 2.63e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.63e-15 | 18 |
meso-epithelial cell | 3.09e-13 | 45 |
lining cell | 9.60e-12 | 58 |
barrier cell | 9.60e-12 | 58 |
endothelial cell of artery | 9.14e-10 | 9 |
mesodermal cell | 1.12e-07 | 121 |
aortic endothelial cell | 3.95e-07 | 6 |
lymphangioblast | 8.06e-07 | 6 |
endothelial cell of lymphatic vessel | 8.06e-07 | 6 |
vascular lymphangioblast | 8.06e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.