FFCP PHASE1:Hg19::chr1:209975591..209975607,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3664|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6121|TSSclassifier=S|UniProt=B1AJU4|association_with_transcript=-80bp_to_ENST00000456314_5end|coexpression_cluster_id=C5|description=CAGE_peak_5_at_IRF6_5end|id=chr1:209975591..209975607,-|ontology_enrichment_celltype=CL:0002139!1.53e-11!24;CL:1000413!3.01e-09!9;CL:0000071!4.74e-09!18;CL:0002546!4.74e-09!18;CL:0000115!5.33e-07!35;CL:0002544!8.60e-07!6|ontology_enrichment_celltype_v019=CL:1000413;5.76e-13;9!CL:0002139;6.94e-13;24!CL:0000071;2.48e-11;18!CL:0000182;4.62e-10;12!CL:0002544;3.14e-09;6!CL:0000115;1.18e-08;36!CL:0002545;1.32e-07;2|ontology_enrichment_celltype_v019_2=CL:1000413,7.52e-13,9;CL:0002139,8.29e-13,24;CL:0000071,2.95e-11,18;CL:0002546,2.95e-11,18;CL:0000182,4.34e-10,12;CL:0002544,3.71e-09,6;CL:0000115,1.61e-08,36;CL:0002545,1.36e-07,2;CL:0002078,8.53e-07,45|ontology_enrichment_development_v019=UBERON:0010226;1.33e-13;1!CL:0002546;2.48e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.32e-07;2|ontology_enrichment_disease_v019_2=DOID:114,1.28e-07,2|ontology_enrichment_uberon=UBERON:0007023!2.14e-18!115;UBERON:0004111!1.02e-10!241;UBERON:0000025!5.68e-10!194;UBERON:0003915!3.01e-09!9;UBERON:0004700!3.01e-09!9;UBERON:0001917!3.01e-09!9;UBERON:0001986!4.74e-09!18;UBERON:0004638!4.74e-09!18;UBERON:0004852!4.74e-09!18;UBERON:0000477!1.13e-08!286;UBERON:0007100!4.24e-08!27;UBERON:0000487!4.69e-07!22;UBERON:0002791!5.87e-07!33;UBERON:0001049!8.24e-07!57;UBERON:0005068!8.24e-07!57;UBERON:0006241!8.24e-07!57;UBERON:0007135!8.24e-07!57|ontology_enrichment_uberon_v019=UBERON:0002084;1.33e-13;1!UBERON:0002082;1.33e-13;1!UBERON:0003915;5.76e-13;9!UBERON:0004700;5.76e-13;9!UBERON:0001917;5.76e-13;9!UBERON:0004638;2.48e-11;18!UBERON:0001986;2.48e-11;18!UBERON:0004852;2.48e-11;18!UBERON:0002107;6.13e-11;19!UBERON:0006925;6.13e-11;19!UBERON:0000487;2.58e-09;22!UBERON:0002423;2.31e-08;25!UBERON:0006914;3.20e-08;25!UBERON:0005800;1.32e-07;2!UBERON:0001515;1.32e-07;2!UBERON:0002365;5.35e-07;31!UBERON:0002330;5.35e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002084,8.58e-14,1;UBERON:0002082,8.58e-14,1;UBERON:0010226,8.58e-14,1;UBERON:0003915,7.52e-13,9;UBERON:0004700,7.52e-13,9;UBERON:0001917,7.52e-13,9;UBERON:0004638,2.95e-11,18;UBERON:0001986,2.95e-11,18;UBERON:0004852,2.95e-11,18;UBERON:0002107,5.75e-11,19;UBERON:0006925,5.75e-11,19;UBERON:0008836,5.75e-11,19;UBERON:0008835,1.68e-09,22;UBERON:0003894,1.68e-09,22;UBERON:0003914,1.89e-09,117;UBERON:0000487,2.98e-09,22;UBERON:0009854,4.26e-09,23;UBERON:0007499,2.20e-08,25;UBERON:0009497,2.20e-08,25;UBERON:0000015,2.20e-08,25;UBERON:0002423,2.20e-08,25;UBERON:0006235,2.20e-08,25;UBERON:0004161,2.20e-08,25;UBERON:0006914,3.62e-08,25;UBERON:0009856,4.55e-08,26;UBERON:0005800,1.36e-07,2;UBERON:0001515,1.36e-07,2;UBERON:0002365,8.56e-07,31;UBERON:0002330,8.56e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,0,0.275118041940067,1.04497483268405,0,0,0.33472061276467,0,0,0,0,2.43042584364528,0.17859945656816,0,0.225222960966644,3.06633274931766,0,0,0,0,0,0,0.379891534993739,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,1.96565443335525,6.49868897349544,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,2.41320361269025,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6121 | |||
|TSSclassifier=S | |||
|UniProt=B1AJU4 | |||
|association_with_transcript=-80bp_to_ENST00000456314_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_IRF6_5end | |||
|id=chr1:209975591..209975607,- | |||
|ontology_enrichment_celltype=CL:0002139!1.53e-11!24;CL:1000413!3.01e-09!9;CL:0000071!4.74e-09!18;CL:0002546!4.74e-09!18;CL:0000115!5.33e-07!35;CL:0002544!8.60e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:1000413;5.76e-13;9!CL:0002139;6.94e-13;24!CL:0000071;2.48e-11;18!CL:0000182;4.62e-10;12!CL:0002544;3.14e-09;6!CL:0000115;1.18e-08;36!CL:0002545;1.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,7.52e-13,9;CL:0002139,8.29e-13,24;CL:0000071,2.95e-11,18;CL:0002546,2.95e-11,18;CL:0000182,4.34e-10,12;CL:0002544,3.71e-09,6;CL:0000115,1.61e-08,36;CL:0002545,1.36e-07,2;CL:0002078,8.53e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.33e-13;1!CL:0002546;2.48e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.32e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-18!115;UBERON:0004111!1.02e-10!241;UBERON:0000025!5.68e-10!194;UBERON:0003915!3.01e-09!9;UBERON:0004700!3.01e-09!9;UBERON:0001917!3.01e-09!9;UBERON:0001986!4.74e-09!18;UBERON:0004638!4.74e-09!18;UBERON:0004852!4.74e-09!18;UBERON:0000477!1.13e-08!286;UBERON:0007100!4.24e-08!27;UBERON:0000487!4.69e-07!22;UBERON:0002791!5.87e-07!33;UBERON:0001049!8.24e-07!57;UBERON:0005068!8.24e-07!57;UBERON:0006241!8.24e-07!57;UBERON:0007135!8.24e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.33e-13;1!UBERON:0002082;1.33e-13;1!UBERON:0003915;5.76e-13;9!UBERON:0004700;5.76e-13;9!UBERON:0001917;5.76e-13;9!UBERON:0004638;2.48e-11;18!UBERON:0001986;2.48e-11;18!UBERON:0004852;2.48e-11;18!UBERON:0002107;6.13e-11;19!UBERON:0006925;6.13e-11;19!UBERON:0000487;2.58e-09;22!UBERON:0002423;2.31e-08;25!UBERON:0006914;3.20e-08;25!UBERON:0005800;1.32e-07;2!UBERON:0001515;1.32e-07;2!UBERON:0002365;5.35e-07;31!UBERON:0002330;5.35e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,8.58e-14,1;UBERON:0002082,8.58e-14,1;UBERON:0010226,8.58e-14,1;UBERON:0003915,7.52e-13,9;UBERON:0004700,7.52e-13,9;UBERON:0001917,7.52e-13,9;UBERON:0004638,2.95e-11,18;UBERON:0001986,2.95e-11,18;UBERON:0004852,2.95e-11,18;UBERON:0002107,5.75e-11,19;UBERON:0006925,5.75e-11,19;UBERON:0008836,5.75e-11,19;UBERON:0008835,1.68e-09,22;UBERON:0003894,1.68e-09,22;UBERON:0003914,1.89e-09,117;UBERON:0000487,2.98e-09,22;UBERON:0009854,4.26e-09,23;UBERON:0007499,2.20e-08,25;UBERON:0009497,2.20e-08,25;UBERON:0000015,2.20e-08,25;UBERON:0002423,2.20e-08,25;UBERON:0006235,2.20e-08,25;UBERON:0004161,2.20e-08,25;UBERON:0006914,3.62e-08,25;UBERON:0009856,4.55e-08,26;UBERON:0005800,1.36e-07,2;UBERON:0001515,1.36e-07,2;UBERON:0002365,8.56e-07,31;UBERON:0002330,8.56e-07,31 | |||
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|short_description=p5@IRF6 | |||
}} |
Revision as of 03:25, 12 September 2013
Short description: | p5@IRF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IRF6_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -80bp_to_ENST00000456314_5end |
EntrezGene: | IRF6 |
HGNC: | 6121 |
UniProt: | B1AJU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 7.52e-13 | 9 |
endothelial cell of vascular tree | 8.29e-13 | 24 |
blood vessel endothelial cell | 2.95e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.95e-11 | 18 |
hepatocyte | 4.34e-10 | 12 |
aortic endothelial cell | 3.71e-09 | 6 |
endothelial cell | 1.61e-08 | 36 |
thoracic aorta endothelial cell | 1.36e-07 | 2 |
meso-epithelial cell | 8.53e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 8.58e-14 | 1 |
cardiac ventricle | 8.58e-14 | 1 |
future cardiac ventricle | 8.58e-14 | 1 |
endothelial tube | 7.52e-13 | 9 |
arterial system endothelium | 7.52e-13 | 9 |
endothelium of artery | 7.52e-13 | 9 |
blood vessel endothelium | 2.95e-11 | 18 |
endothelium | 2.95e-11 | 18 |
cardiovascular system endothelium | 2.95e-11 | 18 |
liver | 5.75e-11 | 19 |
digestive gland | 5.75e-11 | 19 |
liver bud | 5.75e-11 | 19 |
hepatic diverticulum | 1.68e-09 | 22 |
liver primordium | 1.68e-09 | 22 |
epithelial tube | 1.89e-09 | 117 |
simple squamous epithelium | 2.98e-09 | 22 |
digestive tract diverticulum | 4.26e-09 | 23 |
epithelial sac | 2.20e-08 | 25 |
epithelium of foregut-midgut junction | 2.20e-08 | 25 |
anatomical boundary | 2.20e-08 | 25 |
hepatobiliary system | 2.20e-08 | 25 |
foregut-midgut junction | 2.20e-08 | 25 |
septum transversum | 2.20e-08 | 25 |
squamous epithelium | 3.62e-08 | 25 |
sac | 4.55e-08 | 26 |
segment of aorta | 1.36e-07 | 2 |
thoracic aorta | 1.36e-07 | 2 |
exocrine gland | 8.56e-07 | 31 |
exocrine system | 8.56e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.28e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.