FFCP PHASE1:Hg19::chr1:207277564..207277569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=722|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1325|TSSclassifier=S|UniProt=P04003,Q5VVQ8|association_with_transcript=-37bp_to_ENST00000367070,NM_000715,uc001hfo.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_8_at_C4BPA_5end|id=chr1:207277564..207277569,+|ontology_enrichment_celltype=CL:0000181!8.43e-23!12;CL:0000417!8.43e-23!12;CL:0000668!8.43e-23!12;CL:0000414!8.43e-23!12;CL:0000412!8.43e-23!12;CL:0000182!8.43e-23!12|ontology_enrichment_celltype_v019=CL:0000182;2.95e-14;12!CL:0000771;3.42e-10;2!CL:0000094;5.18e-10;8!CL:0000081;1.59e-07;11!CL:0000775;1.82e-07;3|ontology_enrichment_celltype_v019_2=CL:0000182,3.01e-14,12;CL:0000771,3.27e-10,2;CL:0000094,5.06e-10,8;CL:0000081,1.56e-07,11;CL:0000775,1.82e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0008835!7.96e-20!22;UBERON:0003894!7.96e-20!22;UBERON:0009854!6.72e-19!23;UBERON:0002107!1.81e-18!19;UBERON:0006925!1.81e-18!19;UBERON:0008836!1.81e-18!19;UBERON:0007499!2.88e-17!25;UBERON:0009497!2.88e-17!25;UBERON:0000015!2.88e-17!25;UBERON:0002423!2.88e-17!25;UBERON:0006235!2.88e-17!25;UBERON:0004161!2.88e-17!25;UBERON:0009856!1.51e-16!26;UBERON:0005057!1.63e-16!26;UBERON:0002365!7.42e-11!31;UBERON:0002330!7.42e-11!31;UBERON:0001041!4.44e-10!98;UBERON:0002368!1.77e-09!35;UBERON:0005911!2.28e-09!82;UBERON:0002405!3.23e-09!115;UBERON:0003929!6.14e-09!54;UBERON:0000077!5.53e-08!130;UBERON:0004921!5.53e-08!129;UBERON:0004185!5.53e-08!129;UBERON:0005177!9.87e-08!107;UBERON:0002171!1.98e-07!1;UBERON:0006518!1.98e-07!1;UBERON:0008949!1.98e-07!1;UBERON:0000101!1.98e-07!1;UBERON:0002167!1.98e-07!1;UBERON:0006122!3.20e-07!1;UBERON:0009569!3.44e-07!113;UBERON:0000466!3.49e-07!126;UBERON:0000949!4.14e-07!45;UBERON:0005172!4.98e-07!55;UBERON:0005173!4.98e-07!55|ontology_enrichment_uberon_v019=UBERON:0002171;2.47e-19;1!UBERON:0006518;2.47e-19;1!UBERON:0008949;2.47e-19;1!UBERON:0000101;2.47e-19;1!UBERON:0002167;2.47e-19;1!UBERON:0002107;1.17e-15;19!UBERON:0006925;1.17e-15;19!UBERON:0002423;5.46e-12;25!UBERON:0002365;4.80e-10;31!UBERON:0002330;4.80e-10;31!UBERON:0002368;3.63e-08;33!UBERON:0000949;6.39e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.25e-19,1;UBERON:0006518,2.25e-19,1;UBERON:0008949,2.25e-19,1;UBERON:0000101,2.25e-19,1;UBERON:0002167,2.25e-19,1;UBERON:0002107,1.19e-15,19;UBERON:0006925,1.19e-15,19;UBERON:0008836,1.19e-15,19;UBERON:0008835,1.44e-13,22;UBERON:0003894,1.44e-13,22;UBERON:0009854,5.40e-13,23;UBERON:0007499,5.54e-12,25;UBERON:0009497,5.54e-12,25;UBERON:0000015,5.54e-12,25;UBERON:0002423,5.54e-12,25;UBERON:0006235,5.54e-12,25;UBERON:0004161,5.54e-12,25;UBERON:0009856,1.55e-11,26;UBERON:0002365,1.00e-09,31;UBERON:0002330,1.00e-09,31;UBERON:0002368,1.20e-08,35;UBERON:0005911,8.06e-08,82;UBERON:0001041,2.34e-07,87;UBERON:0000949,8.78e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,7.60530208930985,11.7939266001315,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0360997792901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,3.57347663186684,4.52498500394814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50002955332878,0,0,0,0,0,5.65973286608782,0.314408610199332,4.97086866416635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=722 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |||
|TSSclassifier=S | |||
|UniProt=P04003,Q5VVQ8 | |||
|association_with_transcript=-37bp_to_ENST00000367070,NM_000715,uc001hfo.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_C4BPA_5end | |||
|id=chr1:207277564..207277569,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.43e-23!12;CL:0000417!8.43e-23!12;CL:0000668!8.43e-23!12;CL:0000414!8.43e-23!12;CL:0000412!8.43e-23!12;CL:0000182!8.43e-23!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.95e-14;12!CL:0000771;3.42e-10;2!CL:0000094;5.18e-10;8!CL:0000081;1.59e-07;11!CL:0000775;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.01e-14,12;CL:0000771,3.27e-10,2;CL:0000094,5.06e-10,8;CL:0000081,1.56e-07,11;CL:0000775,1.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!7.96e-20!22;UBERON:0003894!7.96e-20!22;UBERON:0009854!6.72e-19!23;UBERON:0002107!1.81e-18!19;UBERON:0006925!1.81e-18!19;UBERON:0008836!1.81e-18!19;UBERON:0007499!2.88e-17!25;UBERON:0009497!2.88e-17!25;UBERON:0000015!2.88e-17!25;UBERON:0002423!2.88e-17!25;UBERON:0006235!2.88e-17!25;UBERON:0004161!2.88e-17!25;UBERON:0009856!1.51e-16!26;UBERON:0005057!1.63e-16!26;UBERON:0002365!7.42e-11!31;UBERON:0002330!7.42e-11!31;UBERON:0001041!4.44e-10!98;UBERON:0002368!1.77e-09!35;UBERON:0005911!2.28e-09!82;UBERON:0002405!3.23e-09!115;UBERON:0003929!6.14e-09!54;UBERON:0000077!5.53e-08!130;UBERON:0004921!5.53e-08!129;UBERON:0004185!5.53e-08!129;UBERON:0005177!9.87e-08!107;UBERON:0002171!1.98e-07!1;UBERON:0006518!1.98e-07!1;UBERON:0008949!1.98e-07!1;UBERON:0000101!1.98e-07!1;UBERON:0002167!1.98e-07!1;UBERON:0006122!3.20e-07!1;UBERON:0009569!3.44e-07!113;UBERON:0000466!3.49e-07!126;UBERON:0000949!4.14e-07!45;UBERON:0005172!4.98e-07!55;UBERON:0005173!4.98e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.47e-19;1!UBERON:0006518;2.47e-19;1!UBERON:0008949;2.47e-19;1!UBERON:0000101;2.47e-19;1!UBERON:0002167;2.47e-19;1!UBERON:0002107;1.17e-15;19!UBERON:0006925;1.17e-15;19!UBERON:0002423;5.46e-12;25!UBERON:0002365;4.80e-10;31!UBERON:0002330;4.80e-10;31!UBERON:0002368;3.63e-08;33!UBERON:0000949;6.39e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.25e-19,1;UBERON:0006518,2.25e-19,1;UBERON:0008949,2.25e-19,1;UBERON:0000101,2.25e-19,1;UBERON:0002167,2.25e-19,1;UBERON:0002107,1.19e-15,19;UBERON:0006925,1.19e-15,19;UBERON:0008836,1.19e-15,19;UBERON:0008835,1.44e-13,22;UBERON:0003894,1.44e-13,22;UBERON:0009854,5.40e-13,23;UBERON:0007499,5.54e-12,25;UBERON:0009497,5.54e-12,25;UBERON:0000015,5.54e-12,25;UBERON:0002423,5.54e-12,25;UBERON:0006235,5.54e-12,25;UBERON:0004161,5.54e-12,25;UBERON:0009856,1.55e-11,26;UBERON:0002365,1.00e-09,31;UBERON:0002330,1.00e-09,31;UBERON:0002368,1.20e-08,35;UBERON:0005911,8.06e-08,82;UBERON:0001041,2.34e-07,87;UBERON:0000949,8.78e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,7.60530208930985,11.7939266001315,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0360997792901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,3.57347663186684,4.52498500394814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50002955332878,0,0,0,0,0,5.65973286608782,0.314408610199332,4.97086866416635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@C4BPA | |||
}} |
Revision as of 03:14, 12 September 2013
Short description: | p8@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_C4BPA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -37bp_to_ENST00000367070, NM_000715, uc001hfo.2_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | P04003Q5VVQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.01e-14 | 12 |
eosinophil | 3.27e-10 | 2 |
granulocyte | 5.06e-10 | 8 |
blood cell | 1.56e-07 | 11 |
neutrophil | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.25e-19 | 1 |
right lung lobe | 2.25e-19 | 1 |
lower lobe of lung | 2.25e-19 | 1 |
lobe of lung | 2.25e-19 | 1 |
right lung | 2.25e-19 | 1 |
liver | 1.19e-15 | 19 |
digestive gland | 1.19e-15 | 19 |
liver bud | 1.19e-15 | 19 |
hepatic diverticulum | 1.44e-13 | 22 |
liver primordium | 1.44e-13 | 22 |
digestive tract diverticulum | 5.40e-13 | 23 |
epithelial sac | 5.54e-12 | 25 |
epithelium of foregut-midgut junction | 5.54e-12 | 25 |
anatomical boundary | 5.54e-12 | 25 |
hepatobiliary system | 5.54e-12 | 25 |
foregut-midgut junction | 5.54e-12 | 25 |
septum transversum | 5.54e-12 | 25 |
sac | 1.55e-11 | 26 |
exocrine gland | 1.00e-09 | 31 |
exocrine system | 1.00e-09 | 31 |
endocrine gland | 1.20e-08 | 35 |
endo-epithelium | 8.06e-08 | 82 |
foregut | 2.34e-07 | 87 |
endocrine system | 8.78e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.